RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RPL32P62910 135 aaKnown RBP15.37■□□□□ 0.05
VARS-217ENST00000440048 GAGE12HA6NDE8 117 aa15.36■□□□□ 0.05
VARS-217ENST00000440048 CLRN3Q8NCR9 226 aa15.36■□□□□ 0.05
VARS-217ENST00000440048 NPYP01303 97 aa15.35■□□□□ 0.05
VARS-217ENST00000440048 PPBPP02775 128 aa15.35■□□□□ 0.05
VARS-217ENST00000440048 SMR3BP02814 79 aaPredicted RBP15.35■□□□□ 0.05
VARS-217ENST00000440048 DGAT2L7PQ6IED9 249 aa15.35■□□□□ 0.05
VARS-217ENST00000440048 CHCHD10Q8WYQ3 142 aaPredicted RBP15.35■□□□□ 0.05
VARS-217ENST00000440048 COMMD7Q86VX2 200 aa15.34■□□□□ 0.05
VARS-217ENST00000440048 SMIM2Q9BVW6 85 aa15.34■□□□□ 0.05
VARS-217ENST00000440048 CDC42SE2Q9NRR3 84 aa15.34■□□□□ 0.05
VARS-217ENST00000440048 PHOX2AO14813 284 aa15.33■□□□□ 0.04
VARS-217ENST00000440048 ORMDL3Q8N138 153 aa15.33■□□□□ 0.04
VARS-217ENST00000440048 hDV102S1A0JD36 115 aa15.32■□□□□ 0.04
VARS-217ENST00000440048 TMEM136Q6ZRR5 245 aa15.32■□□□□ 0.04
VARS-217ENST00000440048 ZNF664Q8N3J9 261 aa15.32■□□□□ 0.04
VARS-217ENST00000440048 VPS13BQ7Z7G8 4022 aa15.32■□□□□ 0.04
VARS-217ENST00000440048 LINC00959A0A1B0GUT2 108 aa15.31■□□□□ 0.04
VARS-217ENST00000440048 SEC11CQ9BY50 192 aa15.31■□□□□ 0.04
VARS-217ENST00000440048 UBE2D4Q9Y2X8 147 aa15.31■□□□□ 0.04
VARS-217ENST00000440048 SRRM2Q9UQ35 2752 aaKnown RBP15.31■□□□□ 0.04
VARS-217ENST00000440048 TCAPO15273 167 aa15.3■□□□□ 0.04
VARS-217ENST00000440048 SMAGPQ0VAQ4 97 aa15.3■□□□□ 0.04
VARS-217ENST00000440048 Q5VSD8 79 aa15.3■□□□□ 0.04
VARS-217ENST00000440048 PRELID3AQ96N28 172 aa15.3■□□□□ 0.04
VARS-217ENST00000440048 CSDC2Q9Y534 153 aaKnown RBP15.3■□□□□ 0.04
VARS-217ENST00000440048 FOXI1Q12951 378 aa15.29■□□□□ 0.04
VARS-217ENST00000440048 C15orf56Q8N910 161 aa15.29■□□□□ 0.04
VARS-217ENST00000440048 C9orf163Q8N9P6 203 aa15.29■□□□□ 0.04
VARS-217ENST00000440048 IMMP2LQ96T52 175 aa15.29■□□□□ 0.04
VARS-217ENST00000440048 XCL1P47992 114 aa15.28■□□□□ 0.04
VARS-217ENST00000440048 CNBPP62633 177 aaKnown RBP15.28■□□□□ 0.04
VARS-217ENST00000440048 CFAP161Q6P656 301 aa15.28■□□□□ 0.04
VARS-217ENST00000440048 TMEM18Q96B42 140 aa15.28■□□□□ 0.04
VARS-217ENST00000440048 CTDSP1Q9GZU7 261 aa15.28■□□□□ 0.04
VARS-217ENST00000440048 CCL25O15444 150 aa15.27■□□□□ 0.04
VARS-217ENST00000440048 TIMM21Q9BVV7 248 aa15.27■□□□□ 0.04
VARS-217ENST00000440048 AP5S1Q9NUS5 200 aa15.27■□□□□ 0.04
VARS-217ENST00000440048 FAM229AH3BQW9 127 aa15.26■□□□□ 0.03
VARS-217ENST00000440048 SLPIP03973 132 aa15.26■□□□□ 0.03
VARS-217ENST00000440048 RPL39P62891 51 aaKnown RBP15.26■□□□□ 0.03
VARS-217ENST00000440048 SS18Q15532 418 aa15.26■□□□□ 0.03
VARS-217ENST00000440048 SCXQ7RTU7 201 aa15.26■□□□□ 0.03
VARS-217ENST00000440048 CHAC1Q9BUX1 264 aa15.26■□□□□ 0.03
VARS-217ENST00000440048 RNASE13Q5GAN3 156 aaKnown RBP15.25■□□□□ 0.03
VARS-217ENST00000440048 Q6ZUT4 128 aa15.24■□□□□ 0.03
VARS-217ENST00000440048 LAMTOR2Q9Y2Q5 125 aa15.24■□□□□ 0.03
VARS-217ENST00000440048 PRSS47A8MTI9 375 aa15.23■□□□□ 0.03
VARS-217ENST00000440048 INAFM2P0DMQ5 153 aa15.23■□□□□ 0.03
VARS-217ENST00000440048 HIGD2BQ4VC39 106 aa15.23■□□□□ 0.03
VARS-217ENST00000440048 C10orf91Q5T1B1 145 aa15.23■□□□□ 0.03
VARS-217ENST00000440048 CD164L2Q6UWJ8 174 aa15.22■□□□□ 0.03
VARS-217ENST00000440048 SDIM1Q6ZPB5 146 aa15.22■□□□□ 0.03
VARS-217ENST00000440048 CIRBP-AS1Q8TBR5 109 aa15.22■□□□□ 0.03
VARS-217ENST00000440048 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.21■□□□□ 0.03
VARS-217ENST00000440048 LOC389332A0A1B0GUA5 103 aa15.21■□□□□ 0.03
VARS-217ENST00000440048 RAB5AP20339 215 aa15.21■□□□□ 0.03
VARS-217ENST00000440048 MAP1LC3AQ9H492 121 aa15.21■□□□□ 0.03
VARS-217ENST00000440048 DMBT1Q9UGM3 2413 aaPredicted RBP15.21■□□□□ 0.02
VARS-217ENST00000440048 TRAV9-1A0A075B6T8 112 aa15.2■□□□□ 0.02
VARS-217ENST00000440048 GVQW2A0A096LPI5 108 aaPredicted RBP15.2■□□□□ 0.02
VARS-217ENST00000440048 C1orf196B1AJZ1 125 aa15.2■□□□□ 0.02
VARS-217ENST00000440048 FAM104AQ969W3 186 aa15.2■□□□□ 0.02
VARS-217ENST00000440048 SPANXA1Q9NS26 97 aa15.2■□□□□ 0.02
VARS-217ENST00000440048 CARHSP1Q9Y2V2 147 aaKnown RBP15.2■□□□□ 0.02
VARS-217ENST00000440048 TRAV13-1A0A0B4J241 112 aa15.19■□□□□ 0.02
VARS-217ENST00000440048 IGHV3-64A0A075B6Q5 118 aa15.18■□□□□ 0.02
VARS-217ENST00000440048 IGHV1-58A0A0C4DH39 117 aa15.18■□□□□ 0.02
VARS-217ENST00000440048 LINC00528Q8N1L1 170 aa15.18■□□□□ 0.02
VARS-217ENST00000440048 S100PP25815 95 aa15.17■□□□□ 0.02
VARS-217ENST00000440048 Q8N8P6 123 aa15.17■□□□□ 0.02
VARS-217ENST00000440048 OPRPNQ99935 248 aaPredicted RBP15.17■□□□□ 0.02
VARS-217ENST00000440048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.17■□□□□ 0.02
VARS-217ENST00000440048 FLG2Q5D862 2391 aaPredicted RBP15.17■□□□□ 0.02
VARS-217ENST00000440048 PANO1I0J062 215 aa15.16■□□□□ 0.02
VARS-217ENST00000440048 MRPS36P82909 103 aaKnown RBP15.16■□□□□ 0.02
VARS-217ENST00000440048 RHEBQ15382 184 aa15.14■□□□□ 0.01
VARS-217ENST00000440048 KIAA1644Q3SXP7 199 aa15.14■□□□□ 0.01
VARS-217ENST00000440048 COX7A2LO14548 114 aa15.13■□□□□ 0.01
VARS-217ENST00000440048 LINC00526Q96FQ7 95 aa15.13■□□□□ 0.01
VARS-217ENST00000440048 RPS10P5Q9NQ39 176 aa15.13■□□□□ 0.01
VARS-217ENST00000440048 IFI27P40305 119 aaPredicted RBP15.12■□□□□ 0.01
VARS-217ENST00000440048 PYGO1Q9Y3Y4 419 aa15.12■□□□□ 0.01
VARS-217ENST00000440048 PLA2G1BP04054 148 aaKnown RBP15.11■□□□□ 0.01
VARS-217ENST00000440048 MALP21145 153 aa15.11■□□□□ 0.01
VARS-217ENST00000440048 CIRBPQ14011 172 aaKnown RBP15.11■□□□□ 0.01
VARS-217ENST00000440048 GNB1LQ9BYB4 327 aa15.11■□□□□ 0.01
VARS-217ENST00000440048 C5orf38Q86SI9 138 aa15.1■□□□□ 0.01
VARS-217ENST00000440048 NXT2Q9NPJ8 142 aaKnown RBP15.1■□□□□ 0.01
VARS-217ENST00000440048 IGLV4-3A0A075B6K6 122 aa15.09■□□□□ 0.01
VARS-217ENST00000440048 IFITM10A6NMD0 228 aa15.09■□□□□ 0.01
VARS-217ENST00000440048 CHTF8P0CG12 524 aa15.09■□□□□ 0.01
VARS-217ENST00000440048 COX6A2Q02221 97 aa15.09■□□□□ 0.01
VARS-217ENST00000440048 ORMDL2Q53FV1 153 aa15.09■□□□□ 0.01
VARS-217ENST00000440048 CYSLTR1Q9Y271 337 aa15.09■□□□□ 0.01
VARS-217ENST00000440048 ZNF561-AS1K7EIQ3 104 aa15.08■□□□□ 0
VARS-217ENST00000440048 K7EMI3 77 aa15.08■□□□□ 0
VARS-217ENST00000440048 C2orf66Q6UXQ4 117 aa15.08■□□□□ 0
VARS-217ENST00000440048 COX19Q49B96 90 aa15.07■□□□□ 0
VARS-217ENST00000440048 PRSS3P2Q8NHM4 247 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms