RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SYS1-DBNDD2H3BUS1 97 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 PRSS1P07477 247 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 MPV17L2Q567V2 206 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 WFDC10BQ8IUB3 73 aa15.74■□□□□ 0.11
CPSF4-204ENST00000436336 A0A087WX48 190 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 AKR1D1P51857 326 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 RBX1P62877 108 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 Q6ZUT4 128 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 CDC42SE2Q9NRR3 84 aa15.73■□□□□ 0.11
CPSF4-204ENST00000436336 STARD9Q9P2P6 4700 aa15.72■□□□□ 0.11
CPSF4-204ENST00000436336 SPATA12Q7Z6I5 190 aa15.72■□□□□ 0.11
CPSF4-204ENST00000436336 Q8N976 141 aa15.72■□□□□ 0.11
CPSF4-204ENST00000436336 IGLV4-60A0A075B6I1 120 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 H0Y8G0 127 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 PET117Q6UWS5 81 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 ZNF664Q8N3J9 261 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 VCX2Q9H322 139 aa15.71■□□□□ 0.11
CPSF4-204ENST00000436336 PLECQ15149 4684 aaKnown RBP15.71■□□□□ 0.11
CPSF4-204ENST00000436336 TRAV12-1A0A0B4J245 112 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 PMVKQ15126 192 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 TEX43Q6ZNM6 134 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 AMELXQ99217 191 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 UPK3BQ9BT76 320 aa15.71■□□□□ 0.1
CPSF4-204ENST00000436336 RNASE13Q5GAN3 156 aaKnown RBP15.68■□□□□ 0.1
CPSF4-204ENST00000436336 ZC2HC1BQ5TFG8 222 aa15.68■□□□□ 0.1
CPSF4-204ENST00000436336 Q8N3U1 123 aa15.68■□□□□ 0.1
CPSF4-204ENST00000436336 CST9LQ9H4G1 147 aa15.68■□□□□ 0.1
CPSF4-204ENST00000436336 PRSS29PA6NIE9 313 aa15.67■□□□□ 0.1
CPSF4-204ENST00000436336 LGALS9CQ6DKI2 356 aa15.67■□□□□ 0.1
CPSF4-204ENST00000436336 C2orf88Q9BSF0 95 aa15.67■□□□□ 0.1
CPSF4-204ENST00000436336 LINC01556Q5JQF7 62 aa15.66■□□□□ 0.1
CPSF4-204ENST00000436336 LINC01545Q5VT33 79 aa15.66■□□□□ 0.1
CPSF4-204ENST00000436336 UBE2DNLQ8IWF7 75 aa15.66■□□□□ 0.1
CPSF4-204ENST00000436336 C20orf202A1L168 122 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 SIVA1O15304 175 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 DNAH10OSP0CZ25 163 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 ODF1Q14990 250 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 C3orf84H3BNL1 204 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-30P01768 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-33P01772 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 ANGP03950 147 aaKnown RBP15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-30-3P0DP02 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 IGHV3-30-5P0DP03 117 aa15.65■□□□□ 0.1
CPSF4-204ENST00000436336 JOSD1Q15040 202 aaPredicted RBP15.65■□□□□ 0.1
CPSF4-204ENST00000436336 CHTOPQ9Y3Y2 248 aaKnown RBP15.64■□□□□ 0.09
CPSF4-204ENST00000436336 SCGB1D1O95968 90 aa15.63■□□□□ 0.09
CPSF4-204ENST00000436336 CASC10Q5T4H9 136 aa15.63■□□□□ 0.09
CPSF4-204ENST00000436336 F8VRH5 84 aa15.63■□□□□ 0.09
CPSF4-204ENST00000436336 LINC00269Q8N2A0 174 aa15.62■□□□□ 0.09
CPSF4-204ENST00000436336 MRPL35Q9NZE8 188 aaKnown RBP15.62■□□□□ 0.09
CPSF4-204ENST00000436336 PYY3Q5JQD4 70 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 PMCHL2Q9BQD1 86 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 Q9H8V8 135 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 KLK12Q9UKR0 248 aa15.61■□□□□ 0.09
CPSF4-204ENST00000436336 UBE2D1P51668 147 aa15.6■□□□□ 0.09
CPSF4-204ENST00000436336 REG3AQ06141 175 aa15.6■□□□□ 0.09
CPSF4-204ENST00000436336 PRR34Q9NV39 138 aa15.59■□□□□ 0.09
CPSF4-204ENST00000436336 IGLV4-69A0A075B6H9 119 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 TRAV13-1A0A0B4J241 112 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 IGKV3OR2-268A0A0C4DH90 116 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 FAM19A3Q7Z5A8 133 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 TENM2Q9NT68 2774 aa15.58■□□□□ 0.08
CPSF4-204ENST00000436336 DPM2O94777 84 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 CLPSL2Q6UWE3 100 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 A0A0J9YXV3 536 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 LINC00959A0A1B0GUT2 108 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 IGLC3P0DOY3 106 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 PLNP26678 52 aa15.57■□□□□ 0.08
CPSF4-204ENST00000436336 CCL25O15444 150 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 IGKCP01834 107 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 CRPP02741 224 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 SEC11AP67812 179 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 NFE4Q86UQ8 179 aa15.56■□□□□ 0.08
CPSF4-204ENST00000436336 K7EP13 123 aa15.55■□□□□ 0.08
CPSF4-204ENST00000436336 TINCRA0A1B0GVN0 87 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 SS18Q15532 418 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 LINC00242Q5T6M2 205 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 ENHOQ6UWT2 76 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 C10orf126Q8N4M7 172 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 CHAC1Q9BUX1 264 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 LYSTQ99698 3801 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 TRAV9-2A0A087WT02 112 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 UBE2WQ96B02 151 aa15.54■□□□□ 0.08
CPSF4-204ENST00000436336 C11orf86A6NJI1 115 aa15.53■□□□□ 0.08
CPSF4-204ENST00000436336 SMIM6P0DI80 62 aa15.53■□□□□ 0.08
CPSF4-204ENST00000436336 HERVK_113P63121 156 aa15.52■□□□□ 0.08
CPSF4-204ENST00000436336 ATOH7Q8N100 152 aa15.52■□□□□ 0.08
CPSF4-204ENST00000436336 VPS13DQ5THJ4 4388 aa15.52■□□□□ 0.07
CPSF4-204ENST00000436336 MIAQ16674 131 aa15.51■□□□□ 0.07
CPSF4-204ENST00000436336 GEMIN7Q9H840 131 aaKnown RBP15.51■□□□□ 0.07
CPSF4-204ENST00000436336 IBA57-AS1B1ANH7 110 aa15.51■□□□□ 0.07
CPSF4-204ENST00000436336 TRAV8-4A0A0B4J246 113 aa15.5■□□□□ 0.07
CPSF4-204ENST00000436336 DNAH1Q9P2D7 4330 aa15.49■□□□□ 0.07
CPSF4-204ENST00000436336 COX6A2Q02221 97 aa15.49■□□□□ 0.07
CPSF4-204ENST00000436336 ZNF22P17026 224 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-204ENST00000436336 IGLV5-45A0A087WSX0 123 aa15.48■□□□□ 0.07
CPSF4-204ENST00000436336 TMEM170BQ5T4T1 132 aa15.48■□□□□ 0.07
CPSF4-204ENST00000436336 CHCHD10Q8WYQ3 142 aaPredicted RBP15.48■□□□□ 0.07
CPSF4-204ENST00000436336 IGLV10-54A0A075B6I4 117 aa15.47■□□□□ 0.07
CPSF4-204ENST00000436336 CDPF1Q6NVV7 123 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms