RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 STHQ8IWL8 128 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 ANKRD29Q8N6D5 301 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 SLC25A20O43772 301 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 KRTAP1-3Q8IUG1 177 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 CDKN2A-AS1Q9UH64 79 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
CD44-209ENST00000433892 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
CD44-209ENST00000433892 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
CD44-209ENST00000433892 DGAT2L7PQ6IED9 249 aa8.5□□□□□ -1.05
CD44-209ENST00000433892 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
CD44-209ENST00000433892 MIAQ16674 131 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 DNAJC9-AS1A6NH13 148 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 TRIAP1O43715 76 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 ZFAND6Q6FIF0 208 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 DAND5Q8N907 189 aa8.49□□□□□ -1.05
CD44-209ENST00000433892 LINC00694P0DN24 101 aa8.48□□□□□ -1.05
CD44-209ENST00000433892 COX6A2Q02221 97 aa8.48□□□□□ -1.05
CD44-209ENST00000433892 CCL24O00175 119 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 NDUFA7O95182 113 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 Q6ZTI0 123 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 MTORP42345 2549 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 ATXN8Q156A1 80 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 WFDC11Q8NEX6 87 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 ACANP16112 2415 aa8.47□□□□□ -1.05
CD44-209ENST00000433892 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.05
CD44-209ENST00000433892 MT-ATP8P03928 68 aa8.46□□□□□ -1.05
CD44-209ENST00000433892 TIRAPP58753 221 aa8.46□□□□□ -1.05
CD44-209ENST00000433892 IL17DQ8TAD2 202 aa8.46□□□□□ -1.05
CD44-209ENST00000433892 ESM1Q9NQ30 184 aa8.46□□□□□ -1.05
CD44-209ENST00000433892 XGP55808 180 aa8.46□□□□□ -1.06
CD44-209ENST00000433892 LINC01620Q4KN68 170 aa8.46□□□□□ -1.06
CD44-209ENST00000433892 IGLV5-45A0A087WSX0 123 aa8.45□□□□□ -1.06
CD44-209ENST00000433892 LINC00242Q5T6M2 205 aa8.45□□□□□ -1.06
CD44-209ENST00000433892 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
CD44-209ENST00000433892 CITED2Q99967 270 aaPredicted RBP8.45□□□□□ -1.06
CD44-209ENST00000433892 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
CD44-209ENST00000433892 K7EQD1 137 aa8.45□□□□□ -1.06
CD44-209ENST00000433892 NDUFA1O15239 70 aa8.45□□□□□ -1.06
CD44-209ENST00000433892 RPL36AP83881 106 aaKnown RBP8.45□□□□□ -1.06
CD44-209ENST00000433892 RPL36ALQ969Q0 106 aaKnown RBP8.45□□□□□ -1.06
CD44-209ENST00000433892 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
CD44-209ENST00000433892 TRAV13-1A0A0B4J241 112 aa8.44□□□□□ -1.06
CD44-209ENST00000433892 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
CD44-209ENST00000433892 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
CD44-209ENST00000433892 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 M0QXV9 152 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 HERVK_113P63121 156 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 GAGE4Q13068 117 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 GAGE5Q13069 117 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 Q9H8V8 135 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 YAE1D1Q9NRH1 226 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 TIMM17BO60830 172 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 ITPR2Q14571 2701 aa8.43□□□□□ -1.06
CD44-209ENST00000433892 IGLV5-39A0A0G2JS06 123 aa8.42□□□□□ -1.06
CD44-209ENST00000433892 TRBV10-1A0A0K0K1A3 114 aa8.42□□□□□ -1.06
CD44-209ENST00000433892 DAZ2Q13117 558 aaKnown RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 CLEC2BQ92478 149 aa8.42□□□□□ -1.06
CD44-209ENST00000433892 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 ANK3Q12955 4377 aaKnown RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
CD44-209ENST00000433892 TRBV10-2A0A0K0K1G8 114 aa8.42□□□□□ -1.06
CD44-209ENST00000433892 TEX49A0A1B0GTD5 131 aa8.42□□□□□ -1.06
CD44-209ENST00000433892 GIG44P09565 113 aaPredicted RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 RPL13AP40429 203 aaKnown RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 CIRBPQ14011 172 aaKnown RBP8.42□□□□□ -1.06
CD44-209ENST00000433892 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 COX6CP09669 75 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 IFITM1P13164 125 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 HIST2H2BCQ6DN03 193 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 RNF183Q96D59 192 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 PDZD2O15018 2839 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 CIDEAO60543 219 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 CDC42SE2Q9NRR3 84 aa8.41□□□□□ -1.06
CD44-209ENST00000433892 A0A1B0GV72 72 aa8.4□□□□□ -1.06
CD44-209ENST00000433892 H7C423 109 aa8.4□□□□□ -1.06
CD44-209ENST00000433892 RPL35AP18077 110 aaKnown RBP8.4□□□□□ -1.06
CD44-209ENST00000433892 CKS1BP61024 79 aa8.4□□□□□ -1.06
CD44-209ENST00000433892 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
CD44-209ENST00000433892 CSDC2Q9Y534 153 aaKnown RBP8.4□□□□□ -1.06
CD44-209ENST00000433892 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 TMEM262E9PQX1 116 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 GAGE7O76087 117 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 GAGE12FP0CL80 117 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 GAGE12GP0CL81 117 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 GAGE12IP0CL82 117 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 LINC01006Q8NI28 216 aa8.4□□□□□ -1.07
CD44-209ENST00000433892 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
CD44-209ENST00000433892 PLA2G2AP14555 144 aa8.39□□□□□ -1.07
CD44-209ENST00000433892 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms