RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 A0A0D9SG52 128 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 MCRIP1C9JLW8 97 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 M0R129 80 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 YPEL1O60688 119 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 UBL3O95164 117 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 GYPAP02724 150 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 RBP4P02753 201 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 IGKV1-16P04430 117 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 RPL28P46779 137 aaKnown RBP2.63□□□□□ -1.99
USP54-206ENST00000433394 DYNLT3P51808 116 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 CDK5R1Q15078 307 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 KHDC3LQ587J8 217 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 TEN1Q86WV5 123 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 KRTAP13-1Q8IUC0 172 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 Q8NDZ9 215 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 ZNF431Q8TF32 576 aaPredicted RBP2.63□□□□□ -1.99
USP54-206ENST00000433394 IL36BQ9NZH7 164 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 EPDR1Q9UM22 224 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 SERP1Q9Y6X1 66 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 R4GMQ9 66 aa2.63□□□□□ -1.99
USP54-206ENST00000433394 HEATR1Q9H583 2144 aaKnown RBP2.63□□□□□ -1.99
USP54-206ENST00000433394 SPTAN1Q13813 2472 aaKnown RBP2.63□□□□□ -1.99
USP54-206ENST00000433394 MYO7BQ6PIF6 2116 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 FLNCQ14315 2725 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 CHD6Q8TD26 2715 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 TRAV7A0A075B6U4 112 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.62□□□□□ -1.99
USP54-206ENST00000433394 A0A0G2JQZ4 141 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 HMSDA8MTL9 139 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 F8W1H4 67 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 J3QLW9 94 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 K7EP34 96 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 SLC25A5P05141 298 aaKnown RBP2.62□□□□□ -1.99
USP54-206ENST00000433394 ZNF80P51504 273 aaPredicted RBP2.62□□□□□ -1.99
USP54-206ENST00000433394 ADIRFQ15847 76 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 TMEM155Q4W5P6 130 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 UNQ5815/PRO19632Q6UWF5 114 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 TMEM91Q6ZNR0 172 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 LINC00311Q8N616 119 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 ATP6V0E2Q8NHE4 81 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 NPCDR1Q9BY65 106 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 ABRACLQ9P1F3 81 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 NBEAQ8NFP9 2946 aa2.62□□□□□ -1.99
USP54-206ENST00000433394 ABCA4P78363 2273 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 TRBV20-1A0A075B6N2 111 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 ZNF705FA8MVS1 300 aaPredicted RBP2.61□□□□□ -1.99
USP54-206ENST00000433394 M0R233 179 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 IGKV1-5P01602 117 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 HBDP02042 147 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 GYPBP06028 91 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 TRGC1P0CF51 173 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 ZNF705BP0CI00 300 aaPredicted RBP2.61□□□□□ -1.99
USP54-206ENST00000433394 CRYGAP11844 174 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 ASIPP42127 132 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 NPC2P61916 151 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 SNRPD3P62318 126 aaKnown RBP2.61□□□□□ -1.99
USP54-206ENST00000433394 MRPS36P82909 103 aaKnown RBP2.61□□□□□ -1.99
USP54-206ENST00000433394 PHF5AQ7RTV0 110 aaKnown RBP2.61□□□□□ -1.99
USP54-206ENST00000433394 MUCL1Q96DR8 90 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 NPVFQ9HCQ7 196 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 OSTCQ9NRP0 149 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 TP73-AS1Q9UF72 201 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 LHFPL6Q9Y693 200 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 CADP27708 2225 aa2.61□□□□□ -1.99
USP54-206ENST00000433394 ZNF462Q96JM2 2506 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 IGKV1D-43A0A0B4J1Z2 117 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 IGHV1-18A0A0C4DH31 117 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 M0R135 149 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 M0R2P5 195 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 PITX3O75364 302 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 NDUFB6O95139 128 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 IGLV3-1P01715 115 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 CD3DP04234 171 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 HLA-DMBP28068 263 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 SSBP1Q04837 148 aaKnown RBP2.6□□□□□ -1.99
USP54-206ENST00000433394 Q0VG73 95 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 DYNAPQ8N1N2 210 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 S100A16Q96FQ6 103 aaKnown RBP2.6□□□□□ -1.99
USP54-206ENST00000433394 HIST1H2BLQ99880 126 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 RABAC1Q9UI14 185 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 USP9XQ93008 2570 aaPredicted RBP2.6□□□□□ -1.99
USP54-206ENST00000433394 ROS1P08922 2347 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 BAHCC1Q9P281 2608 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
USP54-206ENST00000433394 UBR5O95071 2799 aaPredicted RBP2.59□□□□□ -1.99
USP54-206ENST00000433394 LOC107986453A0A1B0GWG9 222 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 ZNF736B4DX44 427 aaPredicted RBP2.59□□□□□ -1.99
USP54-206ENST00000433394 BUB1B-PAK6H3BSN5 160 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 K7ERJ3 54 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 SSSCA1O60232 199 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 SFT2D2O95562 160 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 IGHV3-7P01780 117 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 MT-ATP8P03928 68 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 Q8IYB0 196 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 TIMM21Q9BVV7 248 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 CST11Q9H112 138 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 SLC35B3Q9H1N7 401 aa2.59□□□□□ -1.99
USP54-206ENST00000433394 LINC00312Q9Y6C7 94 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms