RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TMEM223A0PJW6 202 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 H3BT86 120 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 LGALS9O00182 355 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 IFITM1P13164 125 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 ODF3Q96PU9 254 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 KIR2DL4Q99706 377 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 OVOL2Q9BRP0 275 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 KLK15Q9H2R5 256 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 MDFICQ9P1T7 246 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 PHLDA3Q9Y5J5 127 aa5.96□□□□□ -1.46
VTI1A-202ENST00000432306 A0A1W2PPR1 153 aa5.95□□□□□ -1.46
VTI1A-202ENST00000432306 M0R2P5 195 aa5.95□□□□□ -1.46
VTI1A-202ENST00000432306 Q6ZQT7 251 aa5.95□□□□□ -1.46
VTI1A-202ENST00000432306 C14orf178Q8N769 122 aaPredicted RBP5.95□□□□□ -1.46
VTI1A-202ENST00000432306 OR10J6PQ8NGY7 276 aa5.95□□□□□ -1.46
VTI1A-202ENST00000432306 TRAV4A0A0B4J268 109 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 TRBV7-7A0A0K0K1E9 115 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 FAM223BA6NKX1 122 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 KLLNB2CW77 178 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 C9JAW5 83 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 LYNX1G3V0Z9 82 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 LYNX1P0DP58 116 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 S100A4P26447 101 aaKnown RBP5.94□□□□□ -1.46
VTI1A-202ENST00000432306 RNASE4P34096 147 aaKnown RBP5.94□□□□□ -1.46
VTI1A-202ENST00000432306 FAM223AQ8IWN6 122 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 EDA2RQ9HAV5 297 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 ATP6V0E1O15342 81 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 LGALS3P17931 250 aaKnown RBP5.94□□□□□ -1.46
VTI1A-202ENST00000432306 CLEC19AQ6UXS0 136 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 IMUPQ9GZP8 106 aa5.94□□□□□ -1.46
VTI1A-202ENST00000432306 NDUFA4O00483 81 aa5.93□□□□□ -1.46
VTI1A-202ENST00000432306 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
VTI1A-202ENST00000432306 KRTAP1-1Q07627 177 aa5.93□□□□□ -1.46
VTI1A-202ENST00000432306 BEAN1Q3B7T3 259 aa5.93□□□□□ -1.46
VTI1A-202ENST00000432306 LITAFQ99732 161 aa5.93□□□□□ -1.46
VTI1A-202ENST00000432306 IGHV3OR16-8A0A075B7F1 116 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 TRAV8-4A0A0B4J246 113 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 ZNF22P17026 224 aaPredicted RBP5.92□□□□□ -1.46
VTI1A-202ENST00000432306 TTC32Q5I0X7 151 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 TMEM170BQ5T4T1 132 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 SUMO4Q6EEV6 95 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 C11orf71Q6IPW1 123 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
VTI1A-202ENST00000432306 NTN5Q8WTR8 489 aaPredicted RBP5.92□□□□□ -1.46
VTI1A-202ENST00000432306 PYGO1Q9Y3Y4 419 aa5.92□□□□□ -1.46
VTI1A-202ENST00000432306 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
VTI1A-202ENST00000432306 IGHV3-35A0A0C4DH35 117 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 H3BMM0 161 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 H3BUA1 57 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 CDK2AP2O75956 126 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 MGPP08493 103 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 SFTA2Q6UW10 78 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 TRPT1Q86TN4 253 aaKnown RBP5.91□□□□□ -1.46
VTI1A-202ENST00000432306 MUSTN1Q8IVN3 82 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 UBE2WQ96B02 151 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 C9orf85Q96MD7 179 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 IGHV3-66A0A0C4DH42 116 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 CCDC179H3BU77 68 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 TIMM17BO60830 172 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 ACYP1P07311 99 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 RPL39P62891 51 aaKnown RBP5.91□□□□□ -1.46
VTI1A-202ENST00000432306 ECSCRQ19T08 205 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 C15orf53Q8NAA6 179 aa5.91□□□□□ -1.46
VTI1A-202ENST00000432306 ZNF256Q9Y2P7 627 aaPredicted RBP5.91□□□□□ -1.46
VTI1A-202ENST00000432306 A0A1B0GX51 115 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 M0QY20 66 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 LST1O00453 97 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 GNRH2O43555 120 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 MRPS36P82909 103 aaKnown RBP5.9□□□□□ -1.47
VTI1A-202ENST00000432306 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 SDIM1Q6ZPB5 146 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 C5orf56Q8N8D9 126 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 C20orf203Q8NBC4 194 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 MAP6D1Q9H9H5 199 aa5.9□□□□□ -1.47
VTI1A-202ENST00000432306 ANK2Q01484 3957 aa5.89□□□□□ -1.47
VTI1A-202ENST00000432306 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
VTI1A-202ENST00000432306 H7C423 109 aa5.89□□□□□ -1.47
VTI1A-202ENST00000432306 APOC4P55056 127 aa5.89□□□□□ -1.47
VTI1A-202ENST00000432306 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 COX6CP09669 75 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 MAPK1IP1LQ8NDC0 245 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 USMG5Q96IX5 58 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 ICOSQ9Y6W8 199 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 CUBNO60494 3623 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 IGHV3OR16-13A0A075B7E8 117 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 IGHV3-74A0A0B4J1X5 117 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 TRAV2A0A0B4J234 112 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 F6UB75 175 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 G3V318 75 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 ATP5G1P05496 136 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 EMP1P54849 157 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 C2orf82Q6UX34 121 aa5.88□□□□□ -1.47
VTI1A-202ENST00000432306 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
VTI1A-202ENST00000432306 I3L3M4 83 aa5.87□□□□□ -1.47
VTI1A-202ENST00000432306 J3KT08 172 aa5.87□□□□□ -1.47
VTI1A-202ENST00000432306 IGHV3-30-3P0DP02 117 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms