RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 hDV102S1A0JD36 115 aa13.46□□□□□ -0.25
HSPG2-205ENST00000427897 FGF6P10767 208 aa13.46□□□□□ -0.25
HSPG2-205ENST00000427897 KRTAP26-1Q6PEX3 210 aa13.46□□□□□ -0.25
HSPG2-205ENST00000427897 FCER1GP30273 86 aa13.45□□□□□ -0.26
HSPG2-205ENST00000427897 GAGE12HA6NDE8 117 aa13.44□□□□□ -0.26
HSPG2-205ENST00000427897 GAS8-AS1O95177 125 aa13.44□□□□□ -0.26
HSPG2-205ENST00000427897 PLA2G1BP04054 148 aaKnown RBP13.44□□□□□ -0.26
HSPG2-205ENST00000427897 ZNF25P17030 456 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-205ENST00000427897 CFAP161Q6P656 301 aa13.44□□□□□ -0.26
HSPG2-205ENST00000427897 D6R8Y8 96 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 SMKR1H3BMG3 65 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 VCYO14598 125 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 TMEM136Q6ZRR5 245 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 OR5A1Q8NGJ0 315 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 GNB1LQ9BYB4 327 aa13.43□□□□□ -0.26
HSPG2-205ENST00000427897 ABCA13Q86UQ4 5058 aa13.42□□□□□ -0.26
HSPG2-205ENST00000427897 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-205ENST00000427897 TSHBP01222 138 aa13.42□□□□□ -0.26
HSPG2-205ENST00000427897 MT-ND6P03923 174 aa13.42□□□□□ -0.26
HSPG2-205ENST00000427897 RPS10P46783 165 aaKnown RBP13.42□□□□□ -0.26
HSPG2-205ENST00000427897 SCXQ7RTU7 201 aa13.42□□□□□ -0.26
HSPG2-205ENST00000427897 SMCO4Q9NRQ5 59 aa13.42□□□□□ -0.26
HSPG2-205ENST00000427897 TRBV24-1A0A075B6N3 115 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 TRBV27A0A0K0K1C4 114 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 PHOX2AO14813 284 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 POLR2KP53803 58 aaKnown RBP13.41□□□□□ -0.26
HSPG2-205ENST00000427897 LINC00528Q8N1L1 170 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 NRACQ8N912 160 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 C9orf163Q8N9P6 203 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 KIR2DL4Q99706 377 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 C20orf78Q9BR46 151 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 LAMTOR2Q9Y2Q5 125 aa13.41□□□□□ -0.26
HSPG2-205ENST00000427897 SUMO2P61956 95 aaKnown RBP13.4□□□□□ -0.26
HSPG2-205ENST00000427897 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
HSPG2-205ENST00000427897 CHCHD10Q8WYQ3 142 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-205ENST00000427897 PRELID3AQ96N28 172 aa13.4□□□□□ -0.26
HSPG2-205ENST00000427897 TGIF2-C20orf24A0A0A6YYL0 155 aa13.39□□□□□ -0.27
HSPG2-205ENST00000427897 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
HSPG2-205ENST00000427897 ESDP10768 282 aa13.39□□□□□ -0.27
HSPG2-205ENST00000427897 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
HSPG2-205ENST00000427897 RPL32P62910 135 aaKnown RBP13.38□□□□□ -0.27
HSPG2-205ENST00000427897 CIRBP-AS1Q8TBR5 109 aa13.38□□□□□ -0.27
HSPG2-205ENST00000427897 SS18Q15532 418 aa13.37□□□□□ -0.27
HSPG2-205ENST00000427897 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
HSPG2-205ENST00000427897 NPYP01303 97 aa13.36□□□□□ -0.27
HSPG2-205ENST00000427897 CBLN2Q8IUK8 224 aa13.36□□□□□ -0.27
HSPG2-205ENST00000427897 IGHV3-64A0A075B6Q5 118 aa13.35□□□□□ -0.27
HSPG2-205ENST00000427897 TCAPO15273 167 aa13.35□□□□□ -0.27
HSPG2-205ENST00000427897 XCL1P47992 114 aa13.35□□□□□ -0.27
HSPG2-205ENST00000427897 CNBPP62633 177 aaKnown RBP13.35□□□□□ -0.27
HSPG2-205ENST00000427897 LINC00959A0A1B0GUT2 108 aa13.34□□□□□ -0.27
HSPG2-205ENST00000427897 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
HSPG2-205ENST00000427897 ZNF664Q8N3J9 261 aa13.34□□□□□ -0.27
HSPG2-205ENST00000427897 YPEL4Q96NS1 127 aa13.34□□□□□ -0.27
HSPG2-205ENST00000427897 SMIM2Q9BVW6 85 aa13.34□□□□□ -0.27
HSPG2-205ENST00000427897 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
HSPG2-205ENST00000427897 CCL25O15444 150 aa13.33□□□□□ -0.28
HSPG2-205ENST00000427897 FABP9Q0Z7S8 132 aa13.33□□□□□ -0.28
HSPG2-205ENST00000427897 HIGD2BQ4VC39 106 aa13.33□□□□□ -0.28
HSPG2-205ENST00000427897 MAP1LC3AQ9H492 121 aa13.33□□□□□ -0.28
HSPG2-205ENST00000427897 CDC42SE2Q9NRR3 84 aa13.33□□□□□ -0.28
HSPG2-205ENST00000427897 TRAPPC1Q9Y5R8 145 aa13.33□□□□□ -0.28
HSPG2-205ENST00000427897 PRSS47A8MTI9 375 aa13.31□□□□□ -0.28
HSPG2-205ENST00000427897 S100A1P23297 94 aa13.31□□□□□ -0.28
HSPG2-205ENST00000427897 KIAA1644Q3SXP7 199 aa13.31□□□□□ -0.28
HSPG2-205ENST00000427897 SDIM1Q6ZPB5 146 aa13.31□□□□□ -0.28
HSPG2-205ENST00000427897 C15orf56Q8N910 161 aa13.31□□□□□ -0.28
HSPG2-205ENST00000427897 FOXI1Q12951 378 aa13.3□□□□□ -0.28
HSPG2-205ENST00000427897 RAB5AP20339 215 aa13.28□□□□□ -0.28
HSPG2-205ENST00000427897 NXT2Q9NPJ8 142 aaKnown RBP13.28□□□□□ -0.28
HSPG2-205ENST00000427897 UBE2D4Q9Y2X8 147 aa13.28□□□□□ -0.28
HSPG2-205ENST00000427897 CSDC2Q9Y534 153 aaKnown RBP13.28□□□□□ -0.28
HSPG2-205ENST00000427897 IGHV1-58A0A0C4DH39 117 aa13.27□□□□□ -0.29
HSPG2-205ENST00000427897 C1orf196B1AJZ1 125 aa13.27□□□□□ -0.29
HSPG2-205ENST00000427897 SLPIP03973 132 aa13.27□□□□□ -0.29
HSPG2-205ENST00000427897 MALP21145 153 aa13.27□□□□□ -0.29
HSPG2-205ENST00000427897 CD164L2Q6UWJ8 174 aa13.27□□□□□ -0.29
HSPG2-205ENST00000427897 ALKBH7Q9BT30 221 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-205ENST00000427897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-205ENST00000427897 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
HSPG2-205ENST00000427897 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
HSPG2-205ENST00000427897 RNASE13Q5GAN3 156 aaKnown RBP13.26□□□□□ -0.29
HSPG2-205ENST00000427897 Q8N8P6 123 aa13.26□□□□□ -0.29
HSPG2-205ENST00000427897 GVQW2A0A096LPI5 108 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-205ENST00000427897 TRAV13-1A0A0B4J241 112 aa13.25□□□□□ -0.29
HSPG2-205ENST00000427897 ZNF561-AS1K7EIQ3 104 aa13.25□□□□□ -0.29
HSPG2-205ENST00000427897 K7EMI3 77 aa13.25□□□□□ -0.29
HSPG2-205ENST00000427897 RPL37AP61513 92 aaKnown RBP13.25□□□□□ -0.29
HSPG2-205ENST00000427897 J3QL48 77 aa13.24□□□□□ -0.29
HSPG2-205ENST00000427897 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
HSPG2-205ENST00000427897 COX6A2Q02221 97 aa13.23□□□□□ -0.29
HSPG2-205ENST00000427897 SRRM2Q9UQ35 2752 aaKnown RBP13.23□□□□□ -0.29
HSPG2-205ENST00000427897 FAT1Q14517 4588 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 PANO1I0J062 215 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 COX7A2LO14548 114 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 SCO1O75880 301 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 ORMDL2Q53FV1 153 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 Q6ZUT4 128 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms