RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
RTN4-210ENST00000427710 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
RTN4-210ENST00000427710 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
RTN4-210ENST00000427710 PKHD1L1Q86WI1 4243 aa9.63□□□□□ -0.87
RTN4-210ENST00000427710 TMEM218A2RU14 115 aa9.62□□□□□ -0.87
RTN4-210ENST00000427710 ATP5L2Q7Z4Y8 100 aa9.62□□□□□ -0.87
RTN4-210ENST00000427710 COMMD7Q86VX2 200 aa9.62□□□□□ -0.87
RTN4-210ENST00000427710 C15orf56Q8N910 161 aa9.62□□□□□ -0.87
RTN4-210ENST00000427710 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
RTN4-210ENST00000427710 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
RTN4-210ENST00000427710 TRBV24-1A0A075B6N3 115 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 SLPIP03973 132 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 XCL1P47992 114 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 HIGD2BQ4VC39 106 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 UQCC3Q6UW78 93 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 SCXQ7RTU7 201 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 MRPL52Q86TS9 123 aaKnown RBP9.61□□□□□ -0.87
RTN4-210ENST00000427710 C20orf78Q9BR46 151 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
RTN4-210ENST00000427710 TCAPO15273 167 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 CCL25O15444 150 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
RTN4-210ENST00000427710 FOXI1Q12951 378 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 DGAT2L7PQ6IED9 249 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 TMEM136Q6ZRR5 245 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 ZNF664Q8N3J9 261 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 CLRN3Q8NCR9 226 aa9.6□□□□□ -0.87
RTN4-210ENST00000427710 Q6ZUT4 128 aa9.59□□□□□ -0.87
RTN4-210ENST00000427710 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
RTN4-210ENST00000427710 C9orf163Q8N9P6 203 aa9.59□□□□□ -0.87
RTN4-210ENST00000427710 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
RTN4-210ENST00000427710 UBE2D4Q9Y2X8 147 aa9.59□□□□□ -0.87
RTN4-210ENST00000427710 LOC389332A0A1B0GUA5 103 aa9.58□□□□□ -0.88
RTN4-210ENST00000427710 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
RTN4-210ENST00000427710 RPL32P62910 135 aaKnown RBP9.58□□□□□ -0.88
RTN4-210ENST00000427710 CHAC1Q9BUX1 264 aa9.58□□□□□ -0.88
RTN4-210ENST00000427710 AP5S1Q9NUS5 200 aa9.58□□□□□ -0.88
RTN4-210ENST00000427710 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
RTN4-210ENST00000427710 PANO1I0J062 215 aa9.57□□□□□ -0.88
RTN4-210ENST00000427710 PPBPP02775 128 aa9.57□□□□□ -0.88
RTN4-210ENST00000427710 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
RTN4-210ENST00000427710 SS18Q15532 418 aa9.57□□□□□ -0.88
RTN4-210ENST00000427710 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
RTN4-210ENST00000427710 CIRBP-AS1Q8TBR5 109 aa9.57□□□□□ -0.88
RTN4-210ENST00000427710 OPRPNQ99935 248 aaPredicted RBP9.57□□□□□ -0.88
RTN4-210ENST00000427710 PHOX2AO14813 284 aa9.56□□□□□ -0.88
RTN4-210ENST00000427710 CNBPP62633 177 aaKnown RBP9.56□□□□□ -0.88
RTN4-210ENST00000427710 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
RTN4-210ENST00000427710 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
RTN4-210ENST00000427710 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
RTN4-210ENST00000427710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
RTN4-210ENST00000427710 TRAV13-1A0A0B4J241 112 aa9.55□□□□□ -0.88
RTN4-210ENST00000427710 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
RTN4-210ENST00000427710 FAM104AQ969W3 186 aa9.55□□□□□ -0.88
RTN4-210ENST00000427710 CHTF8P0CG12 524 aa9.54□□□□□ -0.88
RTN4-210ENST00000427710 KIAA1644Q3SXP7 199 aa9.54□□□□□ -0.88
RTN4-210ENST00000427710 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
RTN4-210ENST00000427710 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
RTN4-210ENST00000427710 MYCBP2O75592 4640 aa9.54□□□□□ -0.88
RTN4-210ENST00000427710 IGHV3-64A0A075B6Q5 118 aa9.53□□□□□ -0.88
RTN4-210ENST00000427710 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
RTN4-210ENST00000427710 CD164L2Q6UWJ8 174 aa9.53□□□□□ -0.88
RTN4-210ENST00000427710 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
RTN4-210ENST00000427710 CTDSP1Q9GZU7 261 aa9.53□□□□□ -0.88
RTN4-210ENST00000427710 MAP1LC3AQ9H492 121 aa9.53□□□□□ -0.88
RTN4-210ENST00000427710 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
RTN4-210ENST00000427710 RAB5AP20339 215 aa9.52□□□□□ -0.89
RTN4-210ENST00000427710 IMMP2LQ96T52 175 aa9.52□□□□□ -0.89
RTN4-210ENST00000427710 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
RTN4-210ENST00000427710 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
RTN4-210ENST00000427710 C5orf38Q86SI9 138 aa9.51□□□□□ -0.89
RTN4-210ENST00000427710 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
RTN4-210ENST00000427710 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
RTN4-210ENST00000427710 PRSS47A8MTI9 375 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 C1orf196B1AJZ1 125 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 C10orf91Q5T1B1 145 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 Q8N8P6 123 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 SPANXA1Q9NS26 97 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 LAMTOR2Q9Y2Q5 125 aa9.5□□□□□ -0.89
RTN4-210ENST00000427710 COX6A2Q02221 97 aa9.49□□□□□ -0.89
RTN4-210ENST00000427710 RPS10P5Q9NQ39 176 aa9.49□□□□□ -0.89
RTN4-210ENST00000427710 FAT3Q8TDW7 4589 aa9.49□□□□□ -0.89
RTN4-210ENST00000427710 COX7A2LO14548 114 aa9.48□□□□□ -0.89
RTN4-210ENST00000427710 PLA2G1BP04054 148 aaKnown RBP9.48□□□□□ -0.89
RTN4-210ENST00000427710 MALP21145 153 aa9.48□□□□□ -0.89
RTN4-210ENST00000427710 IFI27P40305 119 aaPredicted RBP9.48□□□□□ -0.89
RTN4-210ENST00000427710 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
RTN4-210ENST00000427710 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
RTN4-210ENST00000427710 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
RTN4-210ENST00000427710 IGLV4-3A0A075B6K6 122 aa9.47□□□□□ -0.89
RTN4-210ENST00000427710 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
RTN4-210ENST00000427710 IFITM10A6NMD0 228 aa9.47□□□□□ -0.89
RTN4-210ENST00000427710 S100PP25815 95 aa9.47□□□□□ -0.89
RTN4-210ENST00000427710 MRPS36P82909 103 aaKnown RBP9.47□□□□□ -0.89
RTN4-210ENST00000427710 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
RTN4-210ENST00000427710 TRAV9-1A0A075B6T8 112 aa9.46□□□□□ -0.9
RTN4-210ENST00000427710 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
RTN4-210ENST00000427710 CARD19Q96LW7 228 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms