RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
LMCD1-204ENST00000426878 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
LMCD1-204ENST00000426878 CSDC2Q9Y534 153 aaKnown RBP11.23□□□□□ -0.61
LMCD1-204ENST00000426878 SMIM2Q9BVW6 85 aa11.22□□□□□ -0.61
LMCD1-204ENST00000426878 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
LMCD1-204ENST00000426878 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
LMCD1-204ENST00000426878 PCLOQ9Y6V0 5065 aa11.22□□□□□ -0.61
LMCD1-204ENST00000426878 FAT1Q14517 4588 aa11.22□□□□□ -0.61
LMCD1-204ENST00000426878 NPYP01303 97 aa11.21□□□□□ -0.61
LMCD1-204ENST00000426878 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.61
LMCD1-204ENST00000426878 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
LMCD1-204ENST00000426878 C10orf91Q5T1B1 145 aa11.2□□□□□ -0.62
LMCD1-204ENST00000426878 ZNF664Q8N3J9 261 aa11.2□□□□□ -0.62
LMCD1-204ENST00000426878 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
LMCD1-204ENST00000426878 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
LMCD1-204ENST00000426878 IGKV3OR2-268A0A0C4DH90 116 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 GAGE12HA6NDE8 117 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 PRSS47A8MTI9 375 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 PRELID3AQ96N28 172 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 UBE2D4Q9Y2X8 147 aa11.19□□□□□ -0.62
LMCD1-204ENST00000426878 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
LMCD1-204ENST00000426878 LINC01620Q4KN68 170 aa11.18□□□□□ -0.62
LMCD1-204ENST00000426878 ABCA13Q86UQ4 5058 aa11.18□□□□□ -0.62
LMCD1-204ENST00000426878 LINC00959A0A1B0GUT2 108 aa11.18□□□□□ -0.62
LMCD1-204ENST00000426878 CNBPP62633 177 aaKnown RBP11.18□□□□□ -0.62
LMCD1-204ENST00000426878 C9orf163Q8N9P6 203 aa11.18□□□□□ -0.62
LMCD1-204ENST00000426878 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
LMCD1-204ENST00000426878 CARHSP1Q9Y2V2 147 aaKnown RBP11.17□□□□□ -0.62
LMCD1-204ENST00000426878 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
LMCD1-204ENST00000426878 CCL25O15444 150 aa11.16□□□□□ -0.62
LMCD1-204ENST00000426878 FOXI1Q12951 378 aa11.16□□□□□ -0.62
LMCD1-204ENST00000426878 EPM2AB3EWF7 344 aa11.15□□□□□ -0.62
LMCD1-204ENST00000426878 HAMPP81172 84 aa11.15□□□□□ -0.62
LMCD1-204ENST00000426878 SS18Q15532 418 aa11.15□□□□□ -0.62
LMCD1-204ENST00000426878 C15orf56Q8N910 161 aa11.15□□□□□ -0.62
LMCD1-204ENST00000426878 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
LMCD1-204ENST00000426878 XCL1P47992 114 aa11.14□□□□□ -0.63
LMCD1-204ENST00000426878 AP5S1Q9NUS5 200 aa11.14□□□□□ -0.63
LMCD1-204ENST00000426878 C1orf196B1AJZ1 125 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 RAB5AP20339 215 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
LMCD1-204ENST00000426878 RHEBQ15382 184 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 CHAC1Q9BUX1 264 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
LMCD1-204ENST00000426878 GVQW2A0A096LPI5 108 aaPredicted RBP11.12□□□□□ -0.63
LMCD1-204ENST00000426878 SMR3BP02814 79 aaPredicted RBP11.12□□□□□ -0.63
LMCD1-204ENST00000426878 SLPIP03973 132 aa11.12□□□□□ -0.63
LMCD1-204ENST00000426878 S100PP25815 95 aa11.12□□□□□ -0.63
LMCD1-204ENST00000426878 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-204ENST00000426878 MRPS36P82909 103 aaKnown RBP11.11□□□□□ -0.63
LMCD1-204ENST00000426878 Q6ZUT4 128 aa11.11□□□□□ -0.63
LMCD1-204ENST00000426878 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
LMCD1-204ENST00000426878 K7EMI3 77 aa11.1□□□□□ -0.63
LMCD1-204ENST00000426878 Q5VSD8 79 aa11.1□□□□□ -0.63
LMCD1-204ENST00000426878 SDIM1Q6ZPB5 146 aa11.1□□□□□ -0.63
LMCD1-204ENST00000426878 SCXQ7RTU7 201 aa11.1□□□□□ -0.63
LMCD1-204ENST00000426878 Q8N8P6 123 aa11.1□□□□□ -0.63
LMCD1-204ENST00000426878 SRRM2Q9UQ35 2752 aaKnown RBP11.1□□□□□ -0.63
LMCD1-204ENST00000426878 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
LMCD1-204ENST00000426878 FAM229AH3BQW9 127 aa11.09□□□□□ -0.63
LMCD1-204ENST00000426878 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
LMCD1-204ENST00000426878 PYGO1Q9Y3Y4 419 aa11.09□□□□□ -0.63
LMCD1-204ENST00000426878 IGHV1-58A0A0C4DH39 117 aa11.09□□□□□ -0.63
LMCD1-204ENST00000426878 RNASE13Q5GAN3 156 aaKnown RBP11.09□□□□□ -0.63
LMCD1-204ENST00000426878 TRAV13-1A0A0B4J241 112 aa11.08□□□□□ -0.64
LMCD1-204ENST00000426878 COX19Q49B96 90 aa11.08□□□□□ -0.64
LMCD1-204ENST00000426878 CIRBP-AS1Q8TBR5 109 aa11.08□□□□□ -0.64
LMCD1-204ENST00000426878 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
LMCD1-204ENST00000426878 RPS10P5Q9NQ39 176 aa11.08□□□□□ -0.64
LMCD1-204ENST00000426878 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
LMCD1-204ENST00000426878 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
LMCD1-204ENST00000426878 IFI27P40305 119 aaPredicted RBP11.06□□□□□ -0.64
LMCD1-204ENST00000426878 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
LMCD1-204ENST00000426878 COX7A2LO14548 114 aa11.05□□□□□ -0.64
LMCD1-204ENST00000426878 CIRBPQ14011 172 aaKnown RBP11.05□□□□□ -0.64
LMCD1-204ENST00000426878 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
LMCD1-204ENST00000426878 MT-ND6P03923 174 aa11.04□□□□□ -0.64
LMCD1-204ENST00000426878 KIAA1644Q3SXP7 199 aa11.04□□□□□ -0.64
LMCD1-204ENST00000426878 CYSLTR1Q9Y271 337 aa11.04□□□□□ -0.64
LMCD1-204ENST00000426878 APOC3P02656 99 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 NPSP0C0P6 89 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 MALP21145 153 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 NDUFA5Q16718 116 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 C2orf66Q6UXQ4 117 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 SVBPQ8N300 66 aa11.03□□□□□ -0.64
LMCD1-204ENST00000426878 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.03□□□□□ -0.64
LMCD1-204ENST00000426878 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.64
LMCD1-204ENST00000426878 SNAPINO95295 136 aa11.02□□□□□ -0.64
LMCD1-204ENST00000426878 G0S2P27469 103 aa11.02□□□□□ -0.64
LMCD1-204ENST00000426878 IGHV3OR16-9A0A0B4J2B5 98 aa11.01□□□□□ -0.65
LMCD1-204ENST00000426878 IFITM10A6NMD0 228 aa11.01□□□□□ -0.65
LMCD1-204ENST00000426878 PANO1I0J062 215 aa11.01□□□□□ -0.65
LMCD1-204ENST00000426878 ZNF561-AS1K7EIQ3 104 aa11.01□□□□□ -0.65
LMCD1-204ENST00000426878 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
LMCD1-204ENST00000426878 ALKBH7Q9BT30 221 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms