RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 TNRC6BQ9UPQ9 1833 aaKnown RBP10.18□□□□□ -0.78
RPL28-202ENST00000426763 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
RPL28-202ENST00000426763 H3BQ85 93 aa10.18□□□□□ -0.78
RPL28-202ENST00000426763 DIRC1Q969H9 104 aa10.18□□□□□ -0.78
RPL28-202ENST00000426763 NFE4Q86UQ8 179 aa10.17□□□□□ -0.78
RPL28-202ENST00000426763 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
RPL28-202ENST00000426763 A0A0J9YWU9 116 aa10.16□□□□□ -0.78
RPL28-202ENST00000426763 LELP1Q5T871 98 aa10.16□□□□□ -0.78
RPL28-202ENST00000426763 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
RPL28-202ENST00000426763 K7EP13 123 aa10.16□□□□□ -0.78
RPL28-202ENST00000426763 FUSP35637 526 aaKnown RBP eCLIP10.16□□□□□ -0.78
RPL28-202ENST00000426763 Q8N976 141 aa10.15□□□□□ -0.78
RPL28-202ENST00000426763 PRM2P04554 102 aa10.15□□□□□ -0.78
RPL28-202ENST00000426763 MIAQ16674 131 aa10.15□□□□□ -0.78
RPL28-202ENST00000426763 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.78
RPL28-202ENST00000426763 RBX1P62877 108 aa10.15□□□□□ -0.78
RPL28-202ENST00000426763 FXYD2P54710 66 aa10.15□□□□□ -0.79
RPL28-202ENST00000426763 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.79
RPL28-202ENST00000426763 PTPRBP23467 1997 aa10.14□□□□□ -0.79
RPL28-202ENST00000426763 JMJD1CQ15652 2540 aa10.14□□□□□ -0.79
RPL28-202ENST00000426763 NANOS2P60321 138 aaKnown RBP10.14□□□□□ -0.79
RPL28-202ENST00000426763 MRGPRG-AS1Q2M3A8 158 aa10.14□□□□□ -0.79
RPL28-202ENST00000426763 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
RPL28-202ENST00000426763 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
RPL28-202ENST00000426763 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
RPL28-202ENST00000426763 TSHBP01222 138 aa10.13□□□□□ -0.79
RPL28-202ENST00000426763 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
RPL28-202ENST00000426763 NRACQ8N912 160 aa10.13□□□□□ -0.79
RPL28-202ENST00000426763 CLUHP3Q96NS8 147 aa10.13□□□□□ -0.79
RPL28-202ENST00000426763 hADV29S1A0JD25 119 aa10.12□□□□□ -0.79
RPL28-202ENST00000426763 USP9XQ93008 2570 aaPredicted RBP10.12□□□□□ -0.79
RPL28-202ENST00000426763 Q8N2B8 174 aa10.12□□□□□ -0.79
RPL28-202ENST00000426763 TMEM223A0PJW6 202 aa10.11□□□□□ -0.79
RPL28-202ENST00000426763 ZFYVE26Q68DK2 2539 aa10.11□□□□□ -0.79
RPL28-202ENST00000426763 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
RPL28-202ENST00000426763 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
RPL28-202ENST00000426763 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
RPL28-202ENST00000426763 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 LECT2O14960 151 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 NPSP0C0P6 89 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 COX7BP24311 80 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 ANKRD29Q8N6D5 301 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 POLR2KP53803 58 aaKnown RBP10.1□□□□□ -0.79
RPL28-202ENST00000426763 SYCNQ0VAF6 134 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 TLN2Q9Y4G6 2542 aa10.1□□□□□ -0.79
RPL28-202ENST00000426763 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 UBE2D3P61077 147 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 UBE2D2P62837 147 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 C4orf48Q5BLP8 95 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 CD164L2Q6UWJ8 174 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 RETNQ9HD89 108 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 CITED1Q99966 193 aa10.09□□□□□ -0.79
RPL28-202ENST00000426763 LINC01620Q4KN68 170 aa10.08□□□□□ -0.8
RPL28-202ENST00000426763 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
RPL28-202ENST00000426763 NUPR2A6NF83 97 aa10.08□□□□□ -0.8
RPL28-202ENST00000426763 LY6G6CO95867 125 aa10.08□□□□□ -0.8
RPL28-202ENST00000426763 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
RPL28-202ENST00000426763 UBE2D4Q9Y2X8 147 aa10.07□□□□□ -0.8
RPL28-202ENST00000426763 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
RPL28-202ENST00000426763 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
RPL28-202ENST00000426763 M0R2N4 97 aa10.06□□□□□ -0.8
RPL28-202ENST00000426763 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
RPL28-202ENST00000426763 LINC00959A0A1B0GUT2 108 aa10.06□□□□□ -0.8
RPL28-202ENST00000426763 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
RPL28-202ENST00000426763 JMJD7-PLA2G4BH0Y9G9 81 aa10.05□□□□□ -0.8
RPL28-202ENST00000426763 ACYP1P07311 99 aa10.05□□□□□ -0.8
RPL28-202ENST00000426763 TRACP01848 142 aa10.05□□□□□ -0.8
RPL28-202ENST00000426763 CLEC2BQ92478 149 aa10.04□□□□□ -0.8
RPL28-202ENST00000426763 A0A087WZ39 114 aa10.04□□□□□ -0.8
RPL28-202ENST00000426763 HIGD2AQ9BW72 106 aa10.04□□□□□ -0.8
RPL28-202ENST00000426763 LRRK2Q5S007 2527 aa10.04□□□□□ -0.8
RPL28-202ENST00000426763 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 C9orf153Q5TBE3 101 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 PKD1L2Q7Z442 2459 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 NDUFS5O43920 106 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 COX8CQ7Z4L0 72 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 NDUFB1O75438 58 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 TMEM256-PLSCR3K7ERE1 68 aa10.03□□□□□ -0.8
RPL28-202ENST00000426763 RNASE8Q8TDE3 154 aaKnown RBP10.03□□□□□ -0.8
RPL28-202ENST00000426763 PCSK5Q92824 1860 aa10.02□□□□□ -0.8
RPL28-202ENST00000426763 XAGE1AQ9HD64 81 aa10.02□□□□□ -0.8
RPL28-202ENST00000426763 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
RPL28-202ENST00000426763 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
RPL28-202ENST00000426763 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 GAS8-AS1O95177 125 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 DSCAML1Q8TD84 2053 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 FAM19A1Q7Z5A9 133 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 TRBV10-2A0A0K0K1G8 114 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 SPANXB1Q9NS25 103 aaPredicted RBP10.01□□□□□ -0.81
RPL28-202ENST00000426763 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
RPL28-202ENST00000426763 NREPQ16612 68 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 Q6ZTC4 211 aa10.01□□□□□ -0.81
RPL28-202ENST00000426763 RBM3P98179 157 aaKnown RBP10.01□□□□□ -0.81
RPL28-202ENST00000426763 H3BT86 120 aa10□□□□□ -0.81
RPL28-202ENST00000426763 UBE2D1P51668 147 aa10□□□□□ -0.81
RPL28-202ENST00000426763 C7orf33Q8WU49 177 aa10□□□□□ -0.81
RPL28-202ENST00000426763 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
RPL28-202ENST00000426763 TAX1BP3O14907 124 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms