RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 COX6A2Q02221 97 aa11.21□□□□□ -0.61
GPC1-203ENST00000425056 ADIRFQ15847 76 aa11.21□□□□□ -0.61
GPC1-203ENST00000425056 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
GPC1-203ENST00000425056 ADCYAP1P18509 176 aa11.2□□□□□ -0.62
GPC1-203ENST00000425056 FOXI1Q12951 378 aa11.2□□□□□ -0.62
GPC1-203ENST00000425056 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
GPC1-203ENST00000425056 ISOC2Q96AB3 205 aa11.2□□□□□ -0.62
GPC1-203ENST00000425056 I3L3M4 83 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 PHOX2AO14813 284 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 SLC7A5P1Q8MH63 180 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 C7orf33Q8WU49 177 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
GPC1-203ENST00000425056 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
GPC1-203ENST00000425056 ESDP10768 282 aa11.18□□□□□ -0.62
GPC1-203ENST00000425056 PMCHP20382 165 aa11.18□□□□□ -0.62
GPC1-203ENST00000425056 GAS8-AS1O95177 125 aa11.17□□□□□ -0.62
GPC1-203ENST00000425056 TSHBP01222 138 aa11.17□□□□□ -0.62
GPC1-203ENST00000425056 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
GPC1-203ENST00000425056 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
GPC1-203ENST00000425056 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
GPC1-203ENST00000425056 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 LINC00959A0A1B0GUT2 108 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 XCL1P47992 114 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 MRAP2Q96G30 205 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 TMEM242Q9NWH2 141 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 UBR4Q5T4S7 5183 aa11.16□□□□□ -0.62
GPC1-203ENST00000425056 A0A1B0GUT8 65 aa11.15□□□□□ -0.62
GPC1-203ENST00000425056 HIGD1CA8MV81 97 aa11.15□□□□□ -0.62
GPC1-203ENST00000425056 PPP1R2P9O14990 202 aa11.15□□□□□ -0.62
GPC1-203ENST00000425056 CCL25O15444 150 aa11.15□□□□□ -0.62
GPC1-203ENST00000425056 MRPL52Q86TS9 123 aaKnown RBP11.15□□□□□ -0.62
GPC1-203ENST00000425056 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
GPC1-203ENST00000425056 A0A096LNI7 61 aa11.14□□□□□ -0.63
GPC1-203ENST00000425056 TRBV27A0A0K0K1C4 114 aa11.14□□□□□ -0.63
GPC1-203ENST00000425056 MT-ND4LP03901 98 aa11.14□□□□□ -0.63
GPC1-203ENST00000425056 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
GPC1-203ENST00000425056 STPG4Q8N801 248 aa11.14□□□□□ -0.63
GPC1-203ENST00000425056 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
GPC1-203ENST00000425056 PRR3P79522 188 aaKnown RBP11.13□□□□□ -0.63
GPC1-203ENST00000425056 SVBPQ8N300 66 aa11.13□□□□□ -0.63
GPC1-203ENST00000425056 ANAPC16Q96DE5 110 aa11.13□□□□□ -0.63
GPC1-203ENST00000425056 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
GPC1-203ENST00000425056 V9GYV3 84 aa11.13□□□□□ -0.63
GPC1-203ENST00000425056 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
GPC1-203ENST00000425056 APOC3P02656 99 aa11.12□□□□□ -0.63
GPC1-203ENST00000425056 RAB4AP20338 218 aa11.12□□□□□ -0.63
GPC1-203ENST00000425056 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
GPC1-203ENST00000425056 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
GPC1-203ENST00000425056 SNAPINO95295 136 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 RHEBQ15382 184 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 SS18Q15532 418 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 CTDSP1Q9GZU7 261 aa11.11□□□□□ -0.63
GPC1-203ENST00000425056 LINC00526Q96FQ7 95 aa11.1□□□□□ -0.63
GPC1-203ENST00000425056 TNXBP22105 4242 aa11.1□□□□□ -0.63
GPC1-203ENST00000425056 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
GPC1-203ENST00000425056 SMIM27A0A1W2PRY6 76 aa11.07□□□□□ -0.64
GPC1-203ENST00000425056 SYCNQ0VAF6 134 aa11.07□□□□□ -0.64
GPC1-203ENST00000425056 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
GPC1-203ENST00000425056 NAT8BQ9UHF3 227 aa11.07□□□□□ -0.64
GPC1-203ENST00000425056 CSDC2Q9Y534 153 aaKnown RBP11.07□□□□□ -0.64
GPC1-203ENST00000425056 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 ZNF561-AS1K7EIQ3 104 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 VCYO14598 125 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 PPP1R17O96001 155 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 CAMPP49913 170 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 RIGQ13278 110 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 NRACQ8N912 160 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 NUP35Q8NFH5 326 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 RPS10P5Q9NQ39 176 aa11.06□□□□□ -0.64
GPC1-203ENST00000425056 C1orf196B1AJZ1 125 aa11.05□□□□□ -0.64
GPC1-203ENST00000425056 FCER1GP30273 86 aa11.05□□□□□ -0.64
GPC1-203ENST00000425056 SUMO2P61956 95 aaKnown RBP11.05□□□□□ -0.64
GPC1-203ENST00000425056 IMMP2LQ96T52 175 aa11.05□□□□□ -0.64
GPC1-203ENST00000425056 UBE2D4Q9Y2X8 147 aa11.05□□□□□ -0.64
GPC1-203ENST00000425056 SMAGPQ0VAQ4 97 aa11.04□□□□□ -0.64
GPC1-203ENST00000425056 KIR2DL4Q99706 377 aa11.04□□□□□ -0.64
GPC1-203ENST00000425056 COX7A2LO14548 114 aa11.03□□□□□ -0.64
GPC1-203ENST00000425056 PTTG1IPP53801 180 aa11.03□□□□□ -0.64
GPC1-203ENST00000425056 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.65
GPC1-203ENST00000425056 MALP21145 153 aa11.02□□□□□ -0.65
GPC1-203ENST00000425056 S100PP25815 95 aa11.02□□□□□ -0.65
GPC1-203ENST00000425056 SPINK6Q6UWN8 80 aa11.02□□□□□ -0.65
GPC1-203ENST00000425056 TRAV9-1A0A075B6T8 112 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 LOC107984640A0A0U1RRK4 108 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 A0A1B0GW15 77 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 S100A1P23297 94 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 RNASE13Q5GAN3 156 aaKnown RBP11.01□□□□□ -0.65
GPC1-203ENST00000425056 FAM104BQ5XKR9 115 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 Q6ZRP5 223 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 Q6ZUT4 128 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 TIMM21Q9BVV7 248 aa11.01□□□□□ -0.65
GPC1-203ENST00000425056 A0A0J9YXV3 536 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms