RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
C9orf3-204ENST00000424143 Q9UF83 564 aa10.95□□□□□ -0.66
C9orf3-204ENST00000424143 AKAP6Q13023 2319 aa10.94□□□□□ -0.66
C9orf3-204ENST00000424143 A8MZ25 164 aa10.94□□□□□ -0.66
C9orf3-204ENST00000424143 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-204ENST00000424143 Q9H8V8 135 aa10.94□□□□□ -0.66
C9orf3-204ENST00000424143 SMIM1B2RUZ4 78 aa10.93□□□□□ -0.66
C9orf3-204ENST00000424143 COX6A2Q02221 97 aa10.93□□□□□ -0.66
C9orf3-204ENST00000424143 DEFB114Q30KQ6 69 aa10.93□□□□□ -0.66
C9orf3-204ENST00000424143 HTN1P15515 57 aa10.92□□□□□ -0.66
C9orf3-204ENST00000424143 SLURP1P55000 103 aa10.92□□□□□ -0.66
C9orf3-204ENST00000424143 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
C9orf3-204ENST00000424143 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
C9orf3-204ENST00000424143 B5MCH6 92 aa10.91□□□□□ -0.66
C9orf3-204ENST00000424143 F5H768 121 aa10.91□□□□□ -0.66
C9orf3-204ENST00000424143 Q6ZSV7 163 aa10.91□□□□□ -0.66
C9orf3-204ENST00000424143 LINC00643Q86TS7 51 aa10.91□□□□□ -0.66
C9orf3-204ENST00000424143 DAND5Q8N907 189 aa10.91□□□□□ -0.66
C9orf3-204ENST00000424143 OVOL2Q9BRP0 275 aa10.91□□□□□ -0.66
C9orf3-204ENST00000424143 ATP5G1P05496 136 aa10.9□□□□□ -0.66
C9orf3-204ENST00000424143 DYNLRB2Q8TF09 96 aa10.9□□□□□ -0.66
C9orf3-204ENST00000424143 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
C9orf3-204ENST00000424143 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
C9orf3-204ENST00000424143 K7EQD1 137 aa10.89□□□□□ -0.67
C9orf3-204ENST00000424143 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
C9orf3-204ENST00000424143 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
C9orf3-204ENST00000424143 CMC4P56277 68 aaPredicted RBP10.88□□□□□ -0.67
C9orf3-204ENST00000424143 NPC2P61916 151 aa10.88□□□□□ -0.67
C9orf3-204ENST00000424143 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
C9orf3-204ENST00000424143 CCDC179H3BU77 68 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 INAFM2P0DMQ5 153 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 CXCL5P42830 114 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 SORL1Q92673 2214 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 HIST2H2BCQ6DN03 193 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 HIST2H2BDQ6DRA6 164 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 PRIMA1Q86XR5 153 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 C1orf158Q8N1D5 194 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 SS18L2Q9UHA2 77 aa10.87□□□□□ -0.67
C9orf3-204ENST00000424143 NTM-AS1Q6ZSK4 140 aa10.86□□□□□ -0.67
C9orf3-204ENST00000424143 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
C9orf3-204ENST00000424143 PRM2P04554 102 aa10.85□□□□□ -0.67
C9orf3-204ENST00000424143 BAALC-AS2P0C853 105 aa10.85□□□□□ -0.67
C9orf3-204ENST00000424143 CSPG4Q6UVK1 2322 aa10.85□□□□□ -0.67
C9orf3-204ENST00000424143 LINC00694P0DN24 101 aa10.84□□□□□ -0.67
C9orf3-204ENST00000424143 IGHV4-31P0DP07 118 aa10.84□□□□□ -0.67
C9orf3-204ENST00000424143 MEIG1Q5JSS6 88 aa10.84□□□□□ -0.67
C9orf3-204ENST00000424143 C18orf65Q6ZTR6 163 aa10.84□□□□□ -0.67
C9orf3-204ENST00000424143 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
C9orf3-204ENST00000424143 TMEM243Q9BU79 118 aa10.84□□□□□ -0.67
C9orf3-204ENST00000424143 DEFB136Q30KP8 78 aa10.83□□□□□ -0.68
C9orf3-204ENST00000424143 STHQ8IWL8 128 aa10.83□□□□□ -0.68
C9orf3-204ENST00000424143 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
C9orf3-204ENST00000424143 ASH1LQ9NR48 2969 aaKnown RBP10.82□□□□□ -0.68
C9orf3-204ENST00000424143 TRGV1A0A0A0MS02 117 aa10.82□□□□□ -0.68
C9orf3-204ENST00000424143 RELNP78509 3460 aa10.82□□□□□ -0.68
C9orf3-204ENST00000424143 H0YGX0 51 aa10.81□□□□□ -0.68
C9orf3-204ENST00000424143 C5orf38Q86SI9 138 aa10.81□□□□□ -0.68
C9orf3-204ENST00000424143 FAM110AQ9BQ89 295 aa10.81□□□□□ -0.68
C9orf3-204ENST00000424143 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
C9orf3-204ENST00000424143 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
C9orf3-204ENST00000424143 LRRC75A-AS1Q8N1F1 130 aa10.8□□□□□ -0.68
C9orf3-204ENST00000424143 XCL2Q9UBD3 114 aa10.8□□□□□ -0.68
C9orf3-204ENST00000424143 COX7B2Q8TF08 81 aa10.8□□□□□ -0.68
C9orf3-204ENST00000424143 CRPP02741 224 aa10.79□□□□□ -0.68
C9orf3-204ENST00000424143 MALP21145 153 aa10.79□□□□□ -0.68
C9orf3-204ENST00000424143 Q96MF0 132 aa10.79□□□□□ -0.68
C9orf3-204ENST00000424143 DOPEY1Q5JWR5 2465 aa10.79□□□□□ -0.68
C9orf3-204ENST00000424143 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
C9orf3-204ENST00000424143 UBE2L6O14933 153 aa10.78□□□□□ -0.68
C9orf3-204ENST00000424143 OBSCN-AS1Q96MR7 158 aa10.78□□□□□ -0.68
C9orf3-204ENST00000424143 Q6ZTI0 123 aa10.77□□□□□ -0.68
C9orf3-204ENST00000424143 C16orf74Q96GX8 76 aa10.77□□□□□ -0.68
C9orf3-204ENST00000424143 SMCR5Q8TEV8 140 aa10.76□□□□□ -0.69
C9orf3-204ENST00000424143 FAM218AQ96MZ4 157 aa10.76□□□□□ -0.69
C9orf3-204ENST00000424143 CREBBPQ92793 2442 aa10.76□□□□□ -0.69
C9orf3-204ENST00000424143 NDUFA7O95182 113 aa10.76□□□□□ -0.69
C9orf3-204ENST00000424143 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
C9orf3-204ENST00000424143 CHCHD5Q9BSY4 110 aa10.76□□□□□ -0.69
C9orf3-204ENST00000424143 UQCRQO14949 82 aa10.75□□□□□ -0.69
C9orf3-204ENST00000424143 SND1-IT1Q9HBX3 110 aa10.75□□□□□ -0.69
C9orf3-204ENST00000424143 IGKV2-28A0A075B6P5 120 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 IGKV2D-28P01615 120 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 HIST1H4AP62805 103 aaKnown RBP10.74□□□□□ -0.69
C9orf3-204ENST00000424143 C3orf22Q8N5N4 141 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 NRGNQ92686 78 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 CR1P17927 2039 aa10.74□□□□□ -0.69
C9orf3-204ENST00000424143 A0A087WZ39 114 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 A0A0U1RRA0 63 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 MIR7-3HGQ8N6C7 128 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 LINC00526Q96FQ7 95 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 SVEP1Q4LDE5 3571 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 PLAC8L1A1L4L8 177 aa10.73□□□□□ -0.69
C9orf3-204ENST00000424143 A0A1B0GX51 115 aa10.72□□□□□ -0.69
C9orf3-204ENST00000424143 SPG11Q96JI7 2443 aa10.71□□□□□ -0.69
C9orf3-204ENST00000424143 LY6G6DO95868 133 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms