RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 YLPM1P49750 1951 aaKnown RBP5.21□□□□□ -1.58
ALMS1-201ENST00000423048 SHANK1Q9Y566 2161 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 IGLV5-39A0A0G2JS06 123 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 UBE2AP49459 152 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 SBSPONQ8IVN8 264 aa5.21□□□□□ -1.58
ALMS1-201ENST00000423048 SPTA1P02549 2419 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 ARHGAP21Q5T5U3 1957 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 RAI1Q7Z5J4 1906 aaPredicted RBP5.2□□□□□ -1.58
ALMS1-201ENST00000423048 NCOA6Q14686 2063 aaPredicted RBP5.2□□□□□ -1.58
ALMS1-201ENST00000423048 PLA2G2AP14555 144 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 FHL3Q13643 280 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 KIAA2026Q5HYC2 2103 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 DOCK7Q96N67 2140 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 DNAJC13O75165 2243 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 ADAMTS20P59510 1910 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
ALMS1-201ENST00000423048 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
ALMS1-201ENST00000423048 MRAPQ8TCY5 172 aa5.19□□□□□ -1.58
ALMS1-201ENST00000423048 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
ALMS1-201ENST00000423048 F8W735 103 aaPredicted RBP5.19□□□□□ -1.58
ALMS1-201ENST00000423048 DOCK11Q5JSL3 2073 aa5.19□□□□□ -1.58
ALMS1-201ENST00000423048 APC2O95996 2303 aa5.19□□□□□ -1.58
ALMS1-201ENST00000423048 URB1-AS1Q96HZ7 61 aa5.19□□□□□ -1.58
ALMS1-201ENST00000423048 KIF25-AS1Q9Y6Z4 181 aa5.19□□□□□ -1.58
ALMS1-201ENST00000423048 DEFB121Q5J5C9 76 aa5.18□□□□□ -1.58
ALMS1-201ENST00000423048 TANC2Q9HCD6 1990 aa5.18□□□□□ -1.58
ALMS1-201ENST00000423048 Q6ZTI0 123 aa5.18□□□□□ -1.58
ALMS1-201ENST00000423048 C4orf48Q5BLP8 95 aa5.18□□□□□ -1.58
ALMS1-201ENST00000423048 LINC01600Q96MT4 127 aa5.18□□□□□ -1.58
ALMS1-201ENST00000423048 MAPKAPK5-AS1Q8N8E1 139 aa5.18□□□□□ -1.58
ALMS1-201ENST00000423048 URB1O60287 2271 aaKnown RBP5.18□□□□□ -1.58
ALMS1-201ENST00000423048 NHLRC4P0CG21 123 aaPredicted RBP5.17□□□□□ -1.58
ALMS1-201ENST00000423048 SMIM1B2RUZ4 78 aa5.17□□□□□ -1.58
ALMS1-201ENST00000423048 SEC61GP60059 68 aa5.17□□□□□ -1.58
ALMS1-201ENST00000423048 FASNP49327 2511 aaKnown RBP5.17□□□□□ -1.58
ALMS1-201ENST00000423048 NUPR2A6NF83 97 aa5.17□□□□□ -1.58
ALMS1-201ENST00000423048 ERC2-IT1O76042 136 aa5.17□□□□□ -1.58
ALMS1-201ENST00000423048 LINC00242Q5T6M2 205 aa5.17□□□□□ -1.58
ALMS1-201ENST00000423048 GVQW2A0A096LPI5 108 aaPredicted RBP5.16□□□□□ -1.58
ALMS1-201ENST00000423048 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
ALMS1-201ENST00000423048 Q6ZQT7 251 aa5.16□□□□□ -1.58
ALMS1-201ENST00000423048 CLEC2BQ92478 149 aa5.16□□□□□ -1.58
ALMS1-201ENST00000423048 CEP250Q9BV73 2442 aa5.16□□□□□ -1.58
ALMS1-201ENST00000423048 KLK12Q9UKR0 248 aa5.16□□□□□ -1.58
ALMS1-201ENST00000423048 LINC01006Q8NI28 216 aa5.16□□□□□ -1.58
ALMS1-201ENST00000423048 ZNF73O43830 326 aaPredicted RBP5.15□□□□□ -1.58
ALMS1-201ENST00000423048 INTS1Q8N201 2190 aaKnown RBP5.15□□□□□ -1.58
ALMS1-201ENST00000423048 USP17L23D6RBM5 183 aa5.15□□□□□ -1.58
ALMS1-201ENST00000423048 ZFHX2Q9C0A1 2572 aaPredicted RBP5.15□□□□□ -1.59
ALMS1-201ENST00000423048 C7orf33Q8WU49 177 aa5.15□□□□□ -1.59
ALMS1-201ENST00000423048 MALRD1Q5VYJ5 2156 aa5.15□□□□□ -1.59
ALMS1-201ENST00000423048 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
ALMS1-201ENST00000423048 DEFB131BA0A096LNP1 70 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 FRMD6-AS1P0C7T7 363 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 LINC00269Q8N2A0 174 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 Q8N814 137 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 A0A096LNJ9 63 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 DEFB136Q30KP8 78 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 ZNF407Q9C0G0 2248 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 LOC110117498A0A087WWA1 95 aa5.14□□□□□ -1.59
ALMS1-201ENST00000423048 hDV103S1A0JD37 113 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 NCR3O14931 201 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 FSHBP01225 129 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 NTM-AS1Q6ZSK4 140 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 ZNF843Q8N446 348 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 PRR9Q5T870 116 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 SMIM11BQ8TCY0 68 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 TP53AIP1Q9HCN2 124 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 C14orf132Q9NPU4 83 aa5.13□□□□□ -1.59
ALMS1-201ENST00000423048 K7ERS5 55 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 RPL37AP61513 92 aaKnown RBP5.12□□□□□ -1.59
ALMS1-201ENST00000423048 SPATA3Q8NHX4 192 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 TECTAO75443 2155 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 IGHV4-28A0A0C4DH34 117 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 DEFB135Q30KP9 77 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 ODF3L2Q3SX64 289 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 RNASE13Q5GAN3 156 aaKnown RBP5.12□□□□□ -1.59
ALMS1-201ENST00000423048 SDIM1Q6ZPB5 146 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 TEX49A0A1B0GTD5 131 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 C6orf99Q4VX62 202 aa5.12□□□□□ -1.59
ALMS1-201ENST00000423048 PCSK5Q92824 1860 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 FHL2Q14192 279 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 NOTCH2Q04721 2471 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 C19orf84I3L1E1 186 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 IGKV3D-7A0A0C4DH55 119 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 PCNX2A6NKB5 2137 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 ESPL1Q14674 2120 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 MED12LQ86YW9 2145 aa5.11□□□□□ -1.59
ALMS1-201ENST00000423048 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 GTF3C1Q12789 2109 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 CRYGAP11844 174 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 WFDC9Q8NEX5 89 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 LINC00575Q6W349 94 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 MED13Q9UHV7 2174 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 C22orf34Q6ZV56 151 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 C11orf72Q8NBR9 251 aa5.1□□□□□ -1.59
ALMS1-201ENST00000423048 LINC00315P59091 139 aa5.09□□□□□ -1.59
ALMS1-201ENST00000423048 LINC01556Q5JQF7 62 aa5.09□□□□□ -1.59
ALMS1-201ENST00000423048 KPRPQ5T749 579 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms