RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 KRTAP26-1Q6PEX3 210 aa5.62□□□□□ -1.51
MDC1-204ENST00000422266 NUP35Q8NFH5 326 aa5.62□□□□□ -1.51
MDC1-204ENST00000422266 OR5A1Q8NGJ0 315 aa5.62□□□□□ -1.51
MDC1-204ENST00000422266 RPL39LQ96EH5 51 aaKnown RBP5.62□□□□□ -1.51
MDC1-204ENST00000422266 IMMP2LQ96T52 175 aa5.62□□□□□ -1.51
MDC1-204ENST00000422266 KIR2DL4Q99706 377 aa5.62□□□□□ -1.51
MDC1-204ENST00000422266 SMCO4Q9NRQ5 59 aa5.62□□□□□ -1.51
MDC1-204ENST00000422266 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 CCL25O15444 150 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 RAB4AP20338 218 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 FCER1GP30273 86 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 HAMPP81172 84 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 LINC01620Q4KN68 170 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 CIRBP-AS1Q8TBR5 109 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 RNF185Q96GF1 192 aa5.61□□□□□ -1.51
MDC1-204ENST00000422266 ABCA13Q86UQ4 5058 aa5.6□□□□□ -1.51
MDC1-204ENST00000422266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 A0A1B0GXF2 115 aa5.6□□□□□ -1.51
MDC1-204ENST00000422266 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 S100PP25815 95 aa5.6□□□□□ -1.51
MDC1-204ENST00000422266 POLR2KP53803 58 aaKnown RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 SUMO2P61956 95 aaKnown RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 SS18Q15532 418 aa5.6□□□□□ -1.51
MDC1-204ENST00000422266 MRPL54Q6P161 138 aaKnown RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 AMN1Q8IY45 258 aa5.6□□□□□ -1.51
MDC1-204ENST00000422266 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
MDC1-204ENST00000422266 TRBV24-1A0A075B6N3 115 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 TRAV9-1A0A075B6T8 112 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 IGKV3OR2-268A0A0C4DH90 116 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 GAGE12HA6NDE8 117 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 COLCA2A8K830 154 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 PPBPP02775 128 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 ESDP10768 282 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 RPS10P46783 165 aaKnown RBP5.59□□□□□ -1.51
MDC1-204ENST00000422266 FAM104BQ5XKR9 115 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 CHCHD10Q8WYQ3 142 aaPredicted RBP5.59□□□□□ -1.51
MDC1-204ENST00000422266 DPH3Q96FX2 82 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 C20orf78Q9BR46 151 aa5.59□□□□□ -1.51
MDC1-204ENST00000422266 J3QL48 77 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 PHOX2AO14813 284 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 TSHBP01222 138 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 CKS2P33552 79 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 RPL32P62910 135 aaKnown RBP5.58□□□□□ -1.52
MDC1-204ENST00000422266 HBBP68871 147 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 ATP5L2Q7Z4Y8 100 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 ZNF664Q8N3J9 261 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 LINC00474Q9P2X8 69 aa5.58□□□□□ -1.52
MDC1-204ENST00000422266 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
MDC1-204ENST00000422266 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
MDC1-204ENST00000422266 LINC00959A0A1B0GUT2 108 aa5.57□□□□□ -1.52
MDC1-204ENST00000422266 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
MDC1-204ENST00000422266 RPL37AP61513 92 aaKnown RBP5.57□□□□□ -1.52
MDC1-204ENST00000422266 CD164L2Q6UWJ8 174 aa5.57□□□□□ -1.52
MDC1-204ENST00000422266 CDC42SE2Q9NRR3 84 aa5.57□□□□□ -1.52
MDC1-204ENST00000422266 KRTAP29-1A8MX34 341 aaPredicted RBP5.56□□□□□ -1.52
MDC1-204ENST00000422266 ZNF561-AS1K7EIQ3 104 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 RAB5AP20339 215 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 XCL1P47992 114 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 CAMPP49913 170 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 CIRBPQ14011 172 aaKnown RBP5.56□□□□□ -1.52
MDC1-204ENST00000422266 TMEM136Q6ZRR5 245 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 TIMM21Q9BVV7 248 aa5.56□□□□□ -1.52
MDC1-204ENST00000422266 DMBT1Q9UGM3 2413 aaPredicted RBP5.56□□□□□ -1.52
MDC1-204ENST00000422266 FAT1Q14517 4588 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 APOMO95445 188 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 OXTP01178 125 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 MALP21145 153 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 FOXI1Q12951 378 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 MRPL51Q4U2R6 128 aaKnown RBP5.55□□□□□ -1.52
MDC1-204ENST00000422266 NRACQ8N912 160 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 C7orf33Q8WU49 177 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 LAMTOR2Q9Y2Q5 125 aa5.55□□□□□ -1.52
MDC1-204ENST00000422266 FLG2Q5D862 2391 aaPredicted RBP5.55□□□□□ -1.52
MDC1-204ENST00000422266 SMKR1H3BMG3 65 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 GAS8-AS1O95177 125 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 TNFRSF6BO95407 300 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 HIGD2BQ4VC39 106 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 ORMDL3Q8N138 153 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 SPACA4Q8TDM5 124 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 SPANXA1Q9NS26 97 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 UBE2D4Q9Y2X8 147 aa5.54□□□□□ -1.52
MDC1-204ENST00000422266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.54□□□□□ -1.52
MDC1-204ENST00000422266 D6R8Y8 96 aa5.53□□□□□ -1.52
MDC1-204ENST00000422266 COX7A2LO14548 114 aa5.53□□□□□ -1.52
MDC1-204ENST00000422266 CARD19Q96LW7 228 aa5.53□□□□□ -1.52
MDC1-204ENST00000422266 SMIM2Q9BVW6 85 aa5.53□□□□□ -1.52
MDC1-204ENST00000422266 GNB1LQ9BYB4 327 aa5.53□□□□□ -1.52
MDC1-204ENST00000422266 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
MDC1-204ENST00000422266 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
MDC1-204ENST00000422266 A0A087WYN8 130 aa5.52□□□□□ -1.53
MDC1-204ENST00000422266 F8WDY8 70 aa5.52□□□□□ -1.53
MDC1-204ENST00000422266 MT-ND6P03923 174 aa5.52□□□□□ -1.53
MDC1-204ENST00000422266 SLPIP03973 132 aa5.52□□□□□ -1.53
MDC1-204ENST00000422266 TRGC2P03986 189 aa5.52□□□□□ -1.53
MDC1-204ENST00000422266 G0S2P27469 103 aa5.52□□□□□ -1.53
MDC1-204ENST00000422266 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
MDC1-204ENST00000422266 COX6A2Q02221 97 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms