RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 UBE2D4Q9Y2X8 147 aa13.67□□□□□ -0.22
HMGXB4-203ENST00000420166 WFDC2Q14508 124 aa13.66□□□□□ -0.22
HMGXB4-203ENST00000420166 KRTAP26-1Q6PEX3 210 aa13.66□□□□□ -0.22
HMGXB4-203ENST00000420166 TIMM21Q9BVV7 248 aa13.66□□□□□ -0.22
HMGXB4-203ENST00000420166 NXT2Q9NPJ8 142 aaKnown RBP13.66□□□□□ -0.22
HMGXB4-203ENST00000420166 CSDC2Q9Y534 153 aaKnown RBP13.66□□□□□ -0.22
HMGXB4-203ENST00000420166 BIRC6Q9NR09 4857 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 IGLV10-54A0A075B6I4 117 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 IGKV3OR2-268A0A0C4DH90 116 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 RPL39P62891 51 aaKnown RBP13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 DGAT2L7PQ6IED9 249 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 TRAPPC1Q9Y5R8 145 aa13.65□□□□□ -0.22
HMGXB4-203ENST00000420166 DNAH11Q96DT5 4516 aa13.64□□□□□ -0.23
HMGXB4-203ENST00000420166 LECT2O14960 151 aa13.64□□□□□ -0.23
HMGXB4-203ENST00000420166 IFI27P40305 119 aaPredicted RBP13.63□□□□□ -0.23
HMGXB4-203ENST00000420166 ZNF664Q8N3J9 261 aa13.63□□□□□ -0.23
HMGXB4-203ENST00000420166 Q8N814 137 aa13.63□□□□□ -0.23
HMGXB4-203ENST00000420166 PKHD1P08F94 4074 aa13.63□□□□□ -0.23
HMGXB4-203ENST00000420166 K7EMI3 77 aa13.62□□□□□ -0.23
HMGXB4-203ENST00000420166 SPANXA1Q9NS26 97 aa13.62□□□□□ -0.23
HMGXB4-203ENST00000420166 PGPEP1Q9NXJ5 209 aa13.62□□□□□ -0.23
HMGXB4-203ENST00000420166 C16orf90A8MZG2 172 aa13.61□□□□□ -0.23
HMGXB4-203ENST00000420166 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
HMGXB4-203ENST00000420166 Q6ZUT4 128 aa13.61□□□□□ -0.23
HMGXB4-203ENST00000420166 FUSP35637 526 aaKnown RBP eCLIP13.6□□□□□ -0.23
HMGXB4-203ENST00000420166 CDPF1Q6NVV7 123 aa13.6□□□□□ -0.23
HMGXB4-203ENST00000420166 PRSS3P2Q8NHM4 247 aa13.6□□□□□ -0.23
HMGXB4-203ENST00000420166 LINC00959A0A1B0GUT2 108 aa13.59□□□□□ -0.23
HMGXB4-203ENST00000420166 CHCHD10Q8WYQ3 142 aaPredicted RBP13.59□□□□□ -0.23
HMGXB4-203ENST00000420166 RNASE13Q5GAN3 156 aaKnown RBP13.58□□□□□ -0.24
HMGXB4-203ENST00000420166 NTN5Q8WTR8 489 aaPredicted RBP13.58□□□□□ -0.24
HMGXB4-203ENST00000420166 FAM104AQ969W3 186 aa13.58□□□□□ -0.24
HMGXB4-203ENST00000420166 CYSLTR1Q9Y271 337 aa13.58□□□□□ -0.24
HMGXB4-203ENST00000420166 GAGE12HA6NDE8 117 aa13.57□□□□□ -0.24
HMGXB4-203ENST00000420166 USP17L23D6RBM5 183 aa13.57□□□□□ -0.24
HMGXB4-203ENST00000420166 MRPS36P82909 103 aaKnown RBP13.57□□□□□ -0.24
HMGXB4-203ENST00000420166 C2orf66Q6UXQ4 117 aa13.57□□□□□ -0.24
HMGXB4-203ENST00000420166 PYGO1Q9Y3Y4 419 aa13.57□□□□□ -0.24
HMGXB4-203ENST00000420166 LINC01546A6NGU7 62 aa13.56□□□□□ -0.24
HMGXB4-203ENST00000420166 SS18Q15532 418 aa13.56□□□□□ -0.24
HMGXB4-203ENST00000420166 C14orf177Q52M58 125 aa13.56□□□□□ -0.24
HMGXB4-203ENST00000420166 OPRPNQ99935 248 aaPredicted RBP13.56□□□□□ -0.24
HMGXB4-203ENST00000420166 DYNC1H1Q14204 4646 aaKnown RBP13.55□□□□□ -0.24
HMGXB4-203ENST00000420166 C18orf32Q8TCD1 76 aa13.55□□□□□ -0.24
HMGXB4-203ENST00000420166 IGLV5-52A0A0A0MRZ9 124 aa13.54□□□□□ -0.24
HMGXB4-203ENST00000420166 CCL25O15444 150 aa13.54□□□□□ -0.24
HMGXB4-203ENST00000420166 XCL1P47992 114 aa13.54□□□□□ -0.24
HMGXB4-203ENST00000420166 FA2HQ7L5A8 372 aa13.54□□□□□ -0.24
HMGXB4-203ENST00000420166 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.53□□□□□ -0.24
HMGXB4-203ENST00000420166 IGLV4-3A0A075B6K6 122 aa13.53□□□□□ -0.24
HMGXB4-203ENST00000420166 G0S2P27469 103 aa13.53□□□□□ -0.24
HMGXB4-203ENST00000420166 FOXI1Q12951 378 aa13.53□□□□□ -0.24
HMGXB4-203ENST00000420166 TRAV13-1A0A0B4J241 112 aa13.52□□□□□ -0.25
HMGXB4-203ENST00000420166 C1orf196B1AJZ1 125 aa13.52□□□□□ -0.25
HMGXB4-203ENST00000420166 TOMM6Q96B49 74 aa13.51□□□□□ -0.25
HMGXB4-203ENST00000420166 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
HMGXB4-203ENST00000420166 IGIPA6NJ69 53 aa13.5□□□□□ -0.25
HMGXB4-203ENST00000420166 IFITM10A6NMD0 228 aa13.5□□□□□ -0.25
HMGXB4-203ENST00000420166 COLCA2A8K830 154 aa13.5□□□□□ -0.25
HMGXB4-203ENST00000420166 PRSS1P07477 247 aa13.5□□□□□ -0.25
HMGXB4-203ENST00000420166 CD164L2Q6UWJ8 174 aa13.5□□□□□ -0.25
HMGXB4-203ENST00000420166 SCO1O75880 301 aa13.49□□□□□ -0.25
HMGXB4-203ENST00000420166 NPSP0C0P6 89 aa13.49□□□□□ -0.25
HMGXB4-203ENST00000420166 GCSHP23434 173 aa13.49□□□□□ -0.25
HMGXB4-203ENST00000420166 AP5S1Q9NUS5 200 aa13.49□□□□□ -0.25
HMGXB4-203ENST00000420166 CFAP161Q6P656 301 aa13.48□□□□□ -0.25
HMGXB4-203ENST00000420166 URB1-AS1Q96HZ7 61 aa13.48□□□□□ -0.25
HMGXB4-203ENST00000420166 TRGC2P03986 189 aa13.47□□□□□ -0.25
HMGXB4-203ENST00000420166 Q6ZN92 141 aa13.47□□□□□ -0.25
HMGXB4-203ENST00000420166 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
HMGXB4-203ENST00000420166 C15orf56Q8N910 161 aa13.47□□□□□ -0.25
HMGXB4-203ENST00000420166 TIMM17AQ99595 171 aa13.47□□□□□ -0.25
HMGXB4-203ENST00000420166 LINC01549A6NIU2 74 aa13.46□□□□□ -0.25
HMGXB4-203ENST00000420166 LINC00614P0C842 121 aa13.46□□□□□ -0.25
HMGXB4-203ENST00000420166 KRTAP10-1P60331 282 aa13.46□□□□□ -0.25
HMGXB4-203ENST00000420166 LINC00173Q6ZV60 143 aa13.46□□□□□ -0.25
HMGXB4-203ENST00000420166 SCGB3A1Q96QR1 104 aa13.46□□□□□ -0.25
HMGXB4-203ENST00000420166 hDV102S1A0JD36 115 aa13.45□□□□□ -0.26
HMGXB4-203ENST00000420166 RAB5BP61020 215 aa13.45□□□□□ -0.26
HMGXB4-203ENST00000420166 ERASQ7Z444 233 aa13.45□□□□□ -0.26
HMGXB4-203ENST00000420166 AMELXQ99217 191 aa13.45□□□□□ -0.26
HMGXB4-203ENST00000420166 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
HMGXB4-203ENST00000420166 DNAH5Q8TE73 4624 aa13.44□□□□□ -0.26
HMGXB4-203ENST00000420166 PAPPA-AS1Q5QFB9 102 aa13.44□□□□□ -0.26
HMGXB4-203ENST00000420166 C2orf88Q9BSF0 95 aa13.44□□□□□ -0.26
HMGXB4-203ENST00000420166 VCX2Q9H322 139 aa13.44□□□□□ -0.26
HMGXB4-203ENST00000420166 COX7A2LO14548 114 aa13.43□□□□□ -0.26
HMGXB4-203ENST00000420166 ZC2HC1BQ5TFG8 222 aa13.43□□□□□ -0.26
HMGXB4-203ENST00000420166 A0A096LNJ9 63 aa13.42□□□□□ -0.26
HMGXB4-203ENST00000420166 GVQW2A0A096LPI5 108 aaPredicted RBP13.42□□□□□ -0.26
HMGXB4-203ENST00000420166 IGHV1-58A0A0C4DH39 117 aa13.42□□□□□ -0.26
HMGXB4-203ENST00000420166 HIGD2BQ4VC39 106 aa13.42□□□□□ -0.26
HMGXB4-203ENST00000420166 LRP1BQ9NZR2 4599 aa13.42□□□□□ -0.26
HMGXB4-203ENST00000420166 UBE2D1P51668 147 aa13.41□□□□□ -0.26
HMGXB4-203ENST00000420166 LINC00242Q5T6M2 205 aa13.41□□□□□ -0.26
HMGXB4-203ENST00000420166 C5orf38Q86SI9 138 aa13.41□□□□□ -0.26
HMGXB4-203ENST00000420166 IGHV3OR16-9A0A0B4J2B5 98 aa13.4□□□□□ -0.26
HMGXB4-203ENST00000420166 CDK2AP2O75956 126 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms