RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
SYNGAP1-202ENST00000418600 NPSP0C0P6 89 aa12.42□□□□□ -0.42
SYNGAP1-202ENST00000418600 CEMP1Q6PRD7 247 aaPredicted RBP12.42□□□□□ -0.42
SYNGAP1-202ENST00000418600 DCANP1Q8TF63 244 aa12.42□□□□□ -0.42
SYNGAP1-202ENST00000418600 C20orf203Q8NBC4 194 aa12.41□□□□□ -0.42
SYNGAP1-202ENST00000418600 H3BT86 120 aa12.41□□□□□ -0.42
SYNGAP1-202ENST00000418600 Q8N2B8 174 aa12.41□□□□□ -0.42
SYNGAP1-202ENST00000418600 IGKV4-1P06312 121 aa12.41□□□□□ -0.42
SYNGAP1-202ENST00000418600 EDN2P20800 178 aa12.4□□□□□ -0.42
SYNGAP1-202ENST00000418600 UPK3BQ9BT76 320 aa12.4□□□□□ -0.42
SYNGAP1-202ENST00000418600 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
SYNGAP1-202ENST00000418600 IGKV2D-26A0A0A0MRZ7 120 aa12.4□□□□□ -0.43
SYNGAP1-202ENST00000418600 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.43
SYNGAP1-202ENST00000418600 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
SYNGAP1-202ENST00000418600 K7ERS5 55 aa12.39□□□□□ -0.43
SYNGAP1-202ENST00000418600 ZNF80P51504 273 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-202ENST00000418600 TRBV10-2A0A0K0K1G8 114 aa12.39□□□□□ -0.43
SYNGAP1-202ENST00000418600 LINC00467Q9BRT7 94 aa12.39□□□□□ -0.43
SYNGAP1-202ENST00000418600 IGLV4-69A0A075B6H9 119 aa12.38□□□□□ -0.43
SYNGAP1-202ENST00000418600 TEN1Q86WV5 123 aa12.38□□□□□ -0.43
SYNGAP1-202ENST00000418600 CRIP3Q6Q6R5 217 aa12.37□□□□□ -0.43
SYNGAP1-202ENST00000418600 DAND5Q8N907 189 aa12.36□□□□□ -0.43
SYNGAP1-202ENST00000418600 PTPRBP23467 1997 aa12.36□□□□□ -0.43
SYNGAP1-202ENST00000418600 Q6ZPA2 131 aa12.36□□□□□ -0.43
SYNGAP1-202ENST00000418600 FREM1Q5H8C1 2179 aa12.36□□□□□ -0.43
SYNGAP1-202ENST00000418600 BPY2O14599 106 aa12.35□□□□□ -0.43
SYNGAP1-202ENST00000418600 IGLV2-8P01709 118 aa12.35□□□□□ -0.43
SYNGAP1-202ENST00000418600 RBX1P62877 108 aa12.35□□□□□ -0.43
SYNGAP1-202ENST00000418600 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
SYNGAP1-202ENST00000418600 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-202ENST00000418600 CACNA1AO00555 2505 aa12.34□□□□□ -0.43
SYNGAP1-202ENST00000418600 A0A096LNI7 61 aa12.34□□□□□ -0.43
SYNGAP1-202ENST00000418600 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
SYNGAP1-202ENST00000418600 MED13LQ71F56 2210 aa12.34□□□□□ -0.43
SYNGAP1-202ENST00000418600 PLAC8L1A1L4L8 177 aa12.33□□□□□ -0.44
SYNGAP1-202ENST00000418600 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
SYNGAP1-202ENST00000418600 FAM229AH3BQW9 127 aa12.33□□□□□ -0.44
SYNGAP1-202ENST00000418600 ANKRD39Q53RE8 183 aa12.32□□□□□ -0.44
SYNGAP1-202ENST00000418600 PRM2P04554 102 aa12.32□□□□□ -0.44
SYNGAP1-202ENST00000418600 USP17L23D6RBM5 183 aa12.32□□□□□ -0.44
SYNGAP1-202ENST00000418600 IGLV2-11P01706 119 aa12.31□□□□□ -0.44
SYNGAP1-202ENST00000418600 C3orf84H3BNL1 204 aa12.31□□□□□ -0.44
SYNGAP1-202ENST00000418600 HIVEP3Q5T1R4 2406 aa12.31□□□□□ -0.44
SYNGAP1-202ENST00000418600 FAM236AA0A1B0GUQ0 79 aa12.31□□□□□ -0.44
SYNGAP1-202ENST00000418600 FAM236BA0A1B0GV22 79 aa12.31□□□□□ -0.44
SYNGAP1-202ENST00000418600 NCOA6Q14686 2063 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-202ENST00000418600 CD164L2Q6UWJ8 174 aa12.3□□□□□ -0.44
SYNGAP1-202ENST00000418600 CPAMD8Q8IZJ3 1885 aa12.29□□□□□ -0.44
SYNGAP1-202ENST00000418600 SS18L2Q9UHA2 77 aa12.29□□□□□ -0.44
SYNGAP1-202ENST00000418600 TAX1BP3O14907 124 aa12.29□□□□□ -0.44
SYNGAP1-202ENST00000418600 J3KT08 172 aa12.28□□□□□ -0.44
SYNGAP1-202ENST00000418600 CLEC2BQ92478 149 aa12.28□□□□□ -0.44
SYNGAP1-202ENST00000418600 C19orf71A6NCJ1 209 aa12.28□□□□□ -0.44
SYNGAP1-202ENST00000418600 KLLNB2CW77 178 aa12.28□□□□□ -0.44
SYNGAP1-202ENST00000418600 CHCHD7Q9BUK0 85 aa12.27□□□□□ -0.45
SYNGAP1-202ENST00000418600 UBE2D2P62837 147 aa12.27□□□□□ -0.45
SYNGAP1-202ENST00000418600 IBA57-AS1B1ANH7 110 aa12.26□□□□□ -0.45
SYNGAP1-202ENST00000418600 B5MCH6 92 aa12.26□□□□□ -0.45
SYNGAP1-202ENST00000418600 RPL28P46779 137 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-202ENST00000418600 M0QY20 66 aa12.26□□□□□ -0.45
SYNGAP1-202ENST00000418600 SPG11Q96JI7 2443 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 C16orf90A8MZG2 172 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 ATP5EP2Q5VTU8 51 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 LINC00643Q86TS7 51 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 PRR15LQ9BU68 103 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 FXYD2P54710 66 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 FOXI1Q12951 378 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 XAGE1AQ9HD64 81 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 SPANXB1Q9NS25 103 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 CSPG4Q6UVK1 2322 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 TET2Q6N021 2002 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 TNRC6BQ9UPQ9 1833 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 J3QL48 77 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
SYNGAP1-202ENST00000418600 SHANK1Q9Y566 2161 aa12.24□□□□□ -0.45
SYNGAP1-202ENST00000418600 ATRXP46100 2492 aa12.24□□□□□ -0.45
SYNGAP1-202ENST00000418600 ATG2AQ2TAZ0 1938 aa12.24□□□□□ -0.45
SYNGAP1-202ENST00000418600 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 IGKV2-28A0A075B6P5 120 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 A0A0J9YXY3 114 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 IGKV2D-28P01615 120 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 IGLC6P0CF74 106 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 BEAN1Q3B7T3 259 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 C1orf158Q8N1D5 194 aa12.22□□□□□ -0.45
SYNGAP1-202ENST00000418600 DHRS4-AS1Q9P1J3 65 aa12.21□□□□□ -0.45
SYNGAP1-202ENST00000418600 PRR9Q5T870 116 aa12.21□□□□□ -0.46
SYNGAP1-202ENST00000418600 HRCT1Q6UXD1 115 aa12.2□□□□□ -0.46
SYNGAP1-202ENST00000418600 C1orf137Q5JT78 98 aa12.2□□□□□ -0.46
SYNGAP1-202ENST00000418600 M0QXV9 152 aa12.19□□□□□ -0.46
SYNGAP1-202ENST00000418600 LYPD5Q6UWN5 251 aa12.19□□□□□ -0.46
SYNGAP1-202ENST00000418600 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
SYNGAP1-202ENST00000418600 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
SYNGAP1-202ENST00000418600 FHL2Q14192 279 aa12.19□□□□□ -0.46
SYNGAP1-202ENST00000418600 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
SYNGAP1-202ENST00000418600 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
SYNGAP1-202ENST00000418600 PIK3CD-AS1Q5SR53 167 aa12.18□□□□□ -0.46
SYNGAP1-202ENST00000418600 SVIPQ8NHG7 77 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms