RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 ZNF415Q09FC8 603 aa4.38□□□□□ -1.71
NPHP1-204ENST00000417665 PRR9Q5T870 116 aa4.38□□□□□ -1.71
NPHP1-204ENST00000417665 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
NPHP1-204ENST00000417665 IGHV3OR16-10A0A075B7F0 116 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 USP17L23D6RBM5 183 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 LY6LH3BQJ8 138 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 M0R1W7 72 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 DNAL4O96015 105 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 IGHV3-23P01764 117 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
NPHP1-204ENST00000417665 Q6ZSV7 163 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 C10orf105Q8TEF2 133 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 C9orf85Q96MD7 179 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 SERP1Q9Y6X1 66 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 VPS13CQ709C8 3753 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 TRAV12-2A0A075B6T6 113 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 ADARB2-AS1A8MUL3 147 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
NPHP1-204ENST00000417665 BEAN1Q3B7T3 259 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 C9orf139Q6ZV77 190 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 NUP37Q8NFH4 326 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 C16orf92Q96LL3 132 aa4.37□□□□□ -1.71
NPHP1-204ENST00000417665 ABCA1O95477 2261 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 IGLV4-3A0A075B6K6 122 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 F5H697 171 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
NPHP1-204ENST00000417665 MRPS36P82909 103 aaKnown RBP4.36□□□□□ -1.71
NPHP1-204ENST00000417665 ZFAND2AQ8N6M9 145 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 C20orf203Q8NBC4 194 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 OVOL2Q9BRP0 275 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 ZNF580Q9UK33 172 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 COX7A1P24310 79 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 LINC00336Q6ZUF6 198 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 LY6G5BQ8NDX9 201 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 CCL17Q92583 94 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
NPHP1-204ENST00000417665 OPRPNQ99935 248 aaPredicted RBP4.36□□□□□ -1.71
NPHP1-204ENST00000417665 IGHV3OR16-8A0A075B7F1 116 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 RS1O15537 224 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 RPL35AP18077 110 aaKnown RBP4.35□□□□□ -1.71
NPHP1-204ENST00000417665 SEC61GP60059 68 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 VMO1Q7Z5L0 202 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 APRG1Q8IVJ8 170 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 TMEM86BQ8N661 226 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 TMEM243Q9BU79 118 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 V9GYY9 64 aa4.35□□□□□ -1.71
NPHP1-204ENST00000417665 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.35□□□□□ -1.71
NPHP1-204ENST00000417665 IGHV3-66A0A0C4DH42 116 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 CLPSL1A2RUU4 121 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 GNRH2O43555 120 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 IGHG2P01859 326 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 FHL2Q14192 279 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 LINC01561Q8N1V8 128 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 MBD3L2Q8NHZ7 208 aaPredicted RBP4.34□□□□□ -1.71
NPHP1-204ENST00000417665 Q96MF0 132 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 C22orf24Q9Y442 160 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 FAM215AQ9Y5M1 114 aa4.34□□□□□ -1.71
NPHP1-204ENST00000417665 IGHV3-35A0A0C4DH35 117 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 RBMY1BA6NDE4 496 aaKnown RBP4.34□□□□□ -1.72
NPHP1-204ENST00000417665 RBMY1EA6NEQ0 496 aaKnown RBP4.34□□□□□ -1.72
NPHP1-204ENST00000417665 IGF1P05019 195 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 RBMY1DP0C7P1 496 aaKnown RBP4.34□□□□□ -1.72
NPHP1-204ENST00000417665 RBMY1A1P0DJD3 496 aaKnown RBP4.34□□□□□ -1.72
NPHP1-204ENST00000417665 RBMY1CP0DJD4 496 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 CD28P10747 220 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 KRTAP1-1Q07627 177 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 RBMY1FQ15415 496 aaKnown RBP4.34□□□□□ -1.72
NPHP1-204ENST00000417665 FBXL19-AS1Q494R0 122 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 S100A7L2Q5SY68 101 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 LINC00308Q8TCZ7 52 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 DEFB104AQ8WTQ1 72 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 DPM3Q9P2X0 92 aa4.34□□□□□ -1.72
NPHP1-204ENST00000417665 MALRD1Q5VYJ5 2156 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 A0A1W2PPR1 153 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 FAM223BA6NKX1 122 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 NDUFA1O15239 70 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 RPL11P62913 178 aaKnown RBP4.33□□□□□ -1.72
NPHP1-204ENST00000417665 ATP5EP2Q5VTU8 51 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 UBE2D4Q9Y2X8 147 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 U3KQE9 123 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 ANK3Q12955 4377 aaKnown RBP4.33□□□□□ -1.72
NPHP1-204ENST00000417665 A0A087WVE0 104 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 A0A087WWL8 130 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 M0QY20 66 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 NDPQ00604 133 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 KLK9Q2XQG4 91 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 C15orf32Q32M92 178 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 FAM110DQ8TAY7 271 aaPredicted RBP4.33□□□□□ -1.72
NPHP1-204ENST00000417665 RNASE6Q93091 150 aaKnown RBP4.33□□□□□ -1.72
NPHP1-204ENST00000417665 KLK9Q9UKQ9 250 aa4.33□□□□□ -1.72
NPHP1-204ENST00000417665 ANK2Q01484 3957 aa4.32□□□□□ -1.72
NPHP1-204ENST00000417665 IGHV3OR16-13A0A075B7E8 117 aa4.32□□□□□ -1.72
NPHP1-204ENST00000417665 IGHV3-74A0A0B4J1X5 117 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms