RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548		F8W036	122 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	MT-ND4L	P03901	98 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	ZNF25	P17030	456 aa	Predicted RBP	5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	FCER1G	P30273	86 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	PNRC1	Q12796	327 aa	Predicted RBP	5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	OR5A1	Q8NGJ0	315 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	TMEM101	Q96IK0	257 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	BTF3L4	Q96K17	158 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	KRTAP4-8	Q9BYQ9	185 aa		5.44	□□□□□ -1.54
CCT3-208	ENST00000415548	TRBV24-1	A0A075B6N3	115 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	hDV102S1	A0JD36	115 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	LINC00862	A6NCI5	91 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	TNFRSF6B	O95407	300 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	ADCYAP1	P18509	176 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	DGAT2L7P	Q6IED9	249 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	ATP5L2	Q7Z4Y8	100 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	MRPL52	Q86TS9	123 aa	Known RBP	5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	CLRN3	Q8NCR9	226 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	ANAPC16	Q96DE5	110 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	KIR2DL4	Q99706	377 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	C20orf78	Q9BR46	151 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	MYCBP2	O75592	4640 aa		5.43	□□□□□ -1.54
CCT3-208	ENST00000415548	SRRM2	Q9UQ35	2752 aa	Known RBP	5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	LINC00959	A0A1B0GUT2	108 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	FAM229A	H3BQW9	127 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	NPY	P01303	97 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	SCX	Q7RTU7	201 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	C15orf56	Q8N910	161 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	C9orf163	Q8N9P6	203 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	SMIM2	Q9BVW6	85 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	CDC42SE2	Q9NRR3	84 aa		5.42	□□□□□ -1.54
CCT3-208	ENST00000415548	TMEM218	A2RU14	115 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	CCL25	O15444	150 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	PPBP	P02775	128 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	SLPI	P03973	132 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	XCL1	P47992	114 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	CNBP	P62633	177 aa	Known RBP	5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	RPL32	P62910	135 aa	Known RBP	5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	FOXI1	Q12951	378 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	UQCC3	Q6UW78	93 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	TMEM136	Q6ZRR5	245 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	ZNF664	Q8N3J9	261 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	CHAC1	Q9BUX1	264 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	UBE2D4	Q9Y2X8	147 aa		5.41	□□□□□ -1.54
CCT3-208	ENST00000415548	PHOX2A	O14813	284 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	INAFM2	P0DMQ5	153 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	HIGD2B	Q4VC39	106 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	RNASE13	Q5GAN3	156 aa	Known RBP	5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	CFAP161	Q6P656	301 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	COMMD7	Q86VX2	200 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	ORMDL3	Q8N138	153 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	CIRBP-AS1	Q8TBR5	109 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	PRELID3A	Q96N28	172 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	AP5S1	Q9NUS5	200 aa		5.4	□□□□□ -1.54
CCT3-208	ENST00000415548	PKHD1L1	Q86WI1	4243 aa		5.4	□□□□□ -1.55
CCT3-208	ENST00000415548	HERC1	Q15751	4861 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	PANO1	I0J062	215 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	TCAP	O15273	167 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	RPL39	P62891	51 aa	Known RBP	5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	SMAGP	Q0VAQ4	97 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	SS18	Q15532	418 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	SDIM1	Q6ZPB5	146 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548		Q6ZUT4	128 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	TMEM18	Q96B42	140 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	TIMM21	Q9BVV7	248 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	CSDC2	Q9Y534	153 aa	Known RBP	5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	FAT3	Q8TDW7	4589 aa		5.39	□□□□□ -1.55
CCT3-208	ENST00000415548	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.38	□□□□□ -1.55
CCT3-208	ENST00000415548	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.38	□□□□□ -1.55
CCT3-208	ENST00000415548	LOC389332	A0A1B0GUA5	103 aa		5.38	□□□□□ -1.55
CCT3-208	ENST00000415548	CD164L2	Q6UWJ8	174 aa		5.38	□□□□□ -1.55
CCT3-208	ENST00000415548	IMMP2L	Q96T52	175 aa		5.38	□□□□□ -1.55
CCT3-208	ENST00000415548	CTDSP1	Q9GZU7	261 aa		5.38	□□□□□ -1.55
CCT3-208	ENST00000415548	IGHV3-64	A0A075B6Q5	118 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	TRAV13-1	A0A0B4J241	112 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	IGHV1-58	A0A0C4DH39	117 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	C1orf196	B1AJZ1	125 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	FAM104A	Q969W3	186 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	LINC00526	Q96FQ7	95 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	OPRPN	Q99935	248 aa	Predicted RBP	5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	SEC11C	Q9BY50	192 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	SPANXA1	Q9NS26	97 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	LAMTOR2	Q9Y2Q5	125 aa		5.37	□□□□□ -1.55
CCT3-208	ENST00000415548	FLG2	Q5D862	2391 aa	Predicted RBP	5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	PRSS47	A8MTI9	375 aa		5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	COX7A2L	O14548	114 aa		5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	PLA2G1B	P04054	148 aa	Known RBP	5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	CHTF8	P0CG12	524 aa		5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	RAB5A	P20339	215 aa		5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	MAP1LC3A	Q9H492	121 aa		5.36	□□□□□ -1.55
CCT3-208	ENST00000415548	LRP1	Q07954	4544 aa	Known RBP	5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	TRAV9-1	A0A075B6T8	112 aa		5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	MAL	P21145	153 aa		5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	MRPS36	P82909	103 aa	Known RBP	5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	COX6A2	Q02221	97 aa		5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	CIRBP	Q14011	172 aa	Known RBP	5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	C10orf91	Q5T1B1	145 aa		5.35	□□□□□ -1.55
CCT3-208	ENST00000415548	C5orf38	Q86SI9	138 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms