RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TRBV27A0A0K0K1C4 114 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGIPA6NJ69 53 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 LGALS9O00182 355 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 LEPROTO15243 131 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 TIMM17BO60830 172 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGKV2D-40P01614 121 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGHV3-33P01772 117 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 CTSGP08311 255 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 CXCL5P42830 114 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 SYNJ2BPP57105 145 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 DIAPH2-AS1Q14236 149 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 SPRNQ5BIV9 151 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 ZFP2Q6ZN57 461 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 Q8N6K4 173 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 C15orf53Q8NAA6 179 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 RNASE6Q93091 150 aaKnown RBP2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 TTTY13Q9BZ97 58 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 AGPAT4-IT1Q9H0P7 198 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 ZNRD1Q9P1U0 126 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 LAMTOR3Q9UHA4 124 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 BRCA2P51587 3418 aa2.47□□□□□ -2.01
HMGB3P23-201ENST00000414981 IGLV8-61A0A075B6I0 122 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 TMSB15BA0A087X1C1 80 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 ODF3BA8MYP8 253 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 H3BMM0 161 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 COX7A2LO14548 114 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 ZNF73O43830 326 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 CHTF8P0CG12 524 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 LGALS3P17931 250 aaKnown RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 PSMB8P28062 276 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 EFNA4P52798 201 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 POLR2KP53803 58 aaKnown RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 FXYD7P58549 80 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 CCL8P80075 99 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 EGFEM1PQ0D2K5 195 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 SDIM1Q6ZPB5 146 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 GPHB5Q86YW7 130 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 DYNAPQ8N1N2 210 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 C14orf178Q8N769 122 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 FDCSPQ8NFU4 85 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 FAM57AQ8TBR7 257 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 TMEM263Q8WUH6 116 aaKnown RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 UBE2WQ96B02 151 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 ODF3Q96PU9 254 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 HEATR1Q9H583 2144 aaKnown RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 FAM215AQ9Y5M1 114 aa2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 INTS1Q8N201 2190 aaKnown RBP2.46□□□□□ -2.02
HMGB3P23-201ENST00000414981 IGLV4-69A0A075B6H9 119 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 IGHV3-21A0A0B4J1V1 117 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 IGHV7-81A0A0B4J1V7 117 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 IGHV3-72A0A0B4J1Y9 119 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 TRAV2A0A0B4J234 112 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 TMEM223A0PJW6 202 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 FAM223BA6NKX1 122 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 KRTAP4-16G5E9R7 235 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 H3BUA1 57 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 H3BVH4 76 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 M0R378 163 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 UQCRQO14949 82 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 PRB2P02812 416 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 TRGV3P03979 118 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 ZNF22P17026 224 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 S100A4P26447 101 aaKnown RBP2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 RNASE4P34096 147 aaKnown RBP2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 LYPD2Q6UXB3 125 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 FAM223AQ8IWN6 122 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 TMEM105Q8N8V8 129 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 Q8TAT8 98 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 ITLN2Q8WWU7 325 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 FAM104AQ969W3 186 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 AMELXQ99217 191 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 C16orf95Q9H693 158 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 SND1-IT1Q9HBX3 110 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 DYNLRB1Q9NP97 96 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 PHLDA3Q9Y5J5 127 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 KNTC1P50748 2209 aa2.45□□□□□ -2.02
HMGB3P23-201ENST00000414981 TRBV7-6A0A0J9YX20 115 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 NDUFC2-KCTD14E9PQ53 114 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 NDUFA4O00483 81 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 LINC00315P59091 139 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 MRPS36P82909 103 aaKnown RBP2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 C2orf82Q6UX34 121 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 LCA10Q71F78 164 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 ZFAND2AQ8N6M9 145 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 DAND5Q8N907 189 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 LINC01006Q8NI28 216 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 LINC00526Q96FQ7 95 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 DPH3Q96FX2 82 aa2.44□□□□□ -2.02
HMGB3P23-201ENST00000414981 NAV3Q8IVL0 2385 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 CLPSL1A2RUU4 121 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 ATOX1O00244 68 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 TRACP01848 142 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 CRYGAP11844 174 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 RNASE3P12724 160 aaKnown RBP2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 BSPH1Q075Z2 132 aa2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 CIRBPQ14011 172 aaKnown RBP2.43□□□□□ -2.02
HMGB3P23-201ENST00000414981 PRR4Q16378 134 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms