RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 LINC00694P0DN24 101 aa17.41■□□□□ 0.38
VRK2-202ENST00000412104 SRSF9Q13242 221 aaKnown RBP eCLIP17.41■□□□□ 0.38
VRK2-202ENST00000412104 DGAT2L7PQ6IED9 249 aa17.41■□□□□ 0.38
VRK2-202ENST00000412104 OR5A1Q8NGJ0 315 aa17.41■□□□□ 0.38
VRK2-202ENST00000412104 VWFP04275 2813 aa17.4■□□□□ 0.38
VRK2-202ENST00000412104 LOC100131303A0A0U1RQF7 123 aa17.4■□□□□ 0.38
VRK2-202ENST00000412104 GAGE10A6NGK3 116 aa17.4■□□□□ 0.38
VRK2-202ENST00000412104 UBE2D1P51668 147 aa17.4■□□□□ 0.38
VRK2-202ENST00000412104 SAMD5Q5TGI4 173 aa17.4■□□□□ 0.38
VRK2-202ENST00000412104 SBSPONQ8IVN8 264 aa17.39■□□□□ 0.37
VRK2-202ENST00000412104 SPANXB1Q9NS25 103 aaPredicted RBP17.39■□□□□ 0.37
VRK2-202ENST00000412104 A0A1B0GWB2 263 aa17.39■□□□□ 0.37
VRK2-202ENST00000412104 FHL2Q14192 279 aa17.39■□□□□ 0.37
VRK2-202ENST00000412104 X6R8D5 127 aa17.39■□□□□ 0.37
VRK2-202ENST00000412104 K7EP34 96 aa17.38■□□□□ 0.37
VRK2-202ENST00000412104 IGHV3-30-3P0DP02 117 aa17.38■□□□□ 0.37
VRK2-202ENST00000412104 TENM1Q9UKZ4 2725 aa17.38■□□□□ 0.37
VRK2-202ENST00000412104 GTF2H5Q6ZYL4 71 aa17.37■□□□□ 0.37
VRK2-202ENST00000412104 KIR2DL5BQ8NHK3 375 aa17.37■□□□□ 0.37
VRK2-202ENST00000412104 GTSF1LQ9H1H1 148 aa17.37■□□□□ 0.37
VRK2-202ENST00000412104 CSDC2Q9Y534 153 aaKnown RBP17.37■□□□□ 0.37
VRK2-202ENST00000412104 TRAV8-3A0A0A6YYJ7 113 aa17.36■□□□□ 0.37
VRK2-202ENST00000412104 FABP2P12104 132 aa17.36■□□□□ 0.37
VRK2-202ENST00000412104 LINC00612Q8N6U2 182 aa17.36■□□□□ 0.37
VRK2-202ENST00000412104 GEMIN7Q9H840 131 aaKnown RBP17.36■□□□□ 0.37
VRK2-202ENST00000412104 IGHV1-58A0A0C4DH39 117 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 TMEM238LA0A1B0GVL6 79 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 A6NJY4 79 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 IGLL5B9A064 214 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 DEFB130BP0DP73 79 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 DEFB130AP0DP74 79 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 SPCS1Q9Y6A9 102 aa17.35■□□□□ 0.37
VRK2-202ENST00000412104 SMIM9A6NGZ8 99 aa17.34■□□□□ 0.37
VRK2-202ENST00000412104 IGHV3-30P01768 117 aa17.33■□□□□ 0.37
VRK2-202ENST00000412104 IGHV3-30-5P0DP03 117 aa17.33■□□□□ 0.37
VRK2-202ENST00000412104 TMEM243Q9BU79 118 aa17.33■□□□□ 0.37
VRK2-202ENST00000412104 SPINK8P0C7L1 97 aa17.33■□□□□ 0.36
VRK2-202ENST00000412104 TIRAPP58753 221 aa17.33■□□□□ 0.36
VRK2-202ENST00000412104 C10orf126Q8N4M7 172 aa17.33■□□□□ 0.36
VRK2-202ENST00000412104 IGLV5-45A0A087WSX0 123 aa17.32■□□□□ 0.36
VRK2-202ENST00000412104 VSIG2Q96IQ7 327 aa17.32■□□□□ 0.36
VRK2-202ENST00000412104 SMAGPQ0VAQ4 97 aa17.31■□□□□ 0.36
VRK2-202ENST00000412104 CDKN2A-AS1Q9UH64 79 aa17.31■□□□□ 0.36
VRK2-202ENST00000412104 UBE2L6O14933 153 aa17.31■□□□□ 0.36
VRK2-202ENST00000412104 WFDC9Q8NEX5 89 aa17.31■□□□□ 0.36
VRK2-202ENST00000412104 DEFB135Q30KP9 77 aa17.29■□□□□ 0.36
VRK2-202ENST00000412104 CDC42SE2Q9NRR3 84 aa17.29■□□□□ 0.36
VRK2-202ENST00000412104 TEP1Q99973 2627 aaKnown RBP17.29■□□□□ 0.36
VRK2-202ENST00000412104 A0A0J9YXY3 114 aa17.29■□□□□ 0.36
VRK2-202ENST00000412104 APOC4P55056 127 aa17.29■□□□□ 0.36
VRK2-202ENST00000412104 LINC00242Q5T6M2 205 aa17.29■□□□□ 0.36
VRK2-202ENST00000412104 ATRQ13535 2644 aa17.28■□□□□ 0.36
VRK2-202ENST00000412104 COX6A2Q02221 97 aa17.28■□□□□ 0.36
VRK2-202ENST00000412104 FAM19A3Q7Z5A8 133 aa17.28■□□□□ 0.36
VRK2-202ENST00000412104 HERVK_113P63121 156 aa17.27■□□□□ 0.36
VRK2-202ENST00000412104 A8MZ25 164 aa17.27■□□□□ 0.35
VRK2-202ENST00000412104 H7C423 109 aa17.27■□□□□ 0.35
VRK2-202ENST00000412104 NDUFA12Q9UI09 145 aa17.27■□□□□ 0.35
VRK2-202ENST00000412104 TMEM238C9JI98 176 aa17.26■□□□□ 0.35
VRK2-202ENST00000412104 TMEM101Q96IK0 257 aa17.26■□□□□ 0.35
VRK2-202ENST00000412104 TRAV13-1A0A0B4J241 112 aa17.25■□□□□ 0.35
VRK2-202ENST00000412104 WIPF1O43516 503 aa17.25■□□□□ 0.35
VRK2-202ENST00000412104 FAM222AQ5U5X8 452 aa17.25■□□□□ 0.35
VRK2-202ENST00000412104 F8P00451 2351 aa17.25■□□□□ 0.35
VRK2-202ENST00000412104 TRBV6-8A0A0A6YYG3 113 aa17.24■□□□□ 0.35
VRK2-202ENST00000412104 ZFAND6Q6FIF0 208 aa17.24■□□□□ 0.35
VRK2-202ENST00000412104 PGPEP1Q9NXJ5 209 aa17.24■□□□□ 0.35
VRK2-202ENST00000412104 LYRM9A8MSI8 78 aa17.23■□□□□ 0.35
VRK2-202ENST00000412104 APOMO95445 188 aa17.23■□□□□ 0.35
VRK2-202ENST00000412104 GAGE6Q13070 117 aa17.22■□□□□ 0.35
VRK2-202ENST00000412104 LITAFQ99732 161 aa17.22■□□□□ 0.35
VRK2-202ENST00000412104 CFC1BP0CG36 223 aa17.21■□□□□ 0.35
VRK2-202ENST00000412104 CFC1P0CG37 223 aa17.21■□□□□ 0.35
VRK2-202ENST00000412104 GYPEP15421 78 aa17.21■□□□□ 0.35
VRK2-202ENST00000412104 DEFB4AO15263 64 aa17.2■□□□□ 0.34
VRK2-202ENST00000412104 IGHV4-28A0A0C4DH34 117 aa17.19■□□□□ 0.34
VRK2-202ENST00000412104 IGLV5-39A0A0G2JS06 123 aa17.19■□□□□ 0.34
VRK2-202ENST00000412104 MUSTN1Q8IVN3 82 aa17.19■□□□□ 0.34
VRK2-202ENST00000412104 CHCHD5Q9BSY4 110 aa17.19■□□□□ 0.34
VRK2-202ENST00000412104 PRO0255Q9UI72 69 aa17.19■□□□□ 0.34
VRK2-202ENST00000412104 A4D1N5 150 aa17.18■□□□□ 0.34
VRK2-202ENST00000412104 TSPAN13O95857 204 aa17.18■□□□□ 0.34
VRK2-202ENST00000412104 RPL24P83731 157 aaKnown RBP17.18■□□□□ 0.34
VRK2-202ENST00000412104 SMIM1B2RUZ4 78 aa17.17■□□□□ 0.34
VRK2-202ENST00000412104 IGHV4-30-4P0DP06 118 aa17.17■□□□□ 0.34
VRK2-202ENST00000412104 ATP6V0E2Q8NHE4 81 aa17.17■□□□□ 0.34
VRK2-202ENST00000412104 NDUFA1O15239 70 aa17.17■□□□□ 0.34
VRK2-202ENST00000412104 TRRAPQ9Y4A5 3859 aa17.16■□□□□ 0.34
VRK2-202ENST00000412104 IGLV4-60A0A075B6I1 120 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 KRTAP24-1Q3LI83 254 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 Q8NAQ8 132 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 F5H768 121 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 ADAMTSL4-AS1Q5T5F5 129 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 SPANXDQ9BXN6 97 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 SPANXCQ9NY87 97 aa17.15■□□□□ 0.34
VRK2-202ENST00000412104 MIFP14174 115 aa17.14■□□□□ 0.33
VRK2-202ENST00000412104 NBEAL2Q6ZNJ1 2754 aa17.14■□□□□ 0.33
VRK2-202ENST00000412104 EIF4EBP3O60516 100 aaPredicted RBP17.13■□□□□ 0.33
VRK2-202ENST00000412104 PAX4O43316 350 aa17.12■□□□□ 0.33
VRK2-202ENST00000412104 RNF183Q96D59 192 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms