RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-208	ENST00000411917	HIST1H2BL	Q99880	126 aa		13.77	□□□□□ -0.21
PTPA-208	ENST00000411917	IGLV4-3	A0A075B6K6	122 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	TMEM262	E9PQX1	116 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	DGAT2L7P	Q6IED9	249 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	UBE2DNL	Q8IWF7	75 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	ZNF664	Q8N3J9	261 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	C10orf126	Q8N4M7	172 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	FAM104A	Q969W3	186 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	IFI27L1	Q96BM0	104 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	AMELX	Q99217	191 aa		13.76	□□□□□ -0.21
PTPA-208	ENST00000411917	TENM2	Q9NT68	2774 aa		13.75	□□□□□ -0.21
PTPA-208	ENST00000411917		Q6ZN92	141 aa		13.75	□□□□□ -0.21
PTPA-208	ENST00000411917		Q9H8V8	135 aa		13.75	□□□□□ -0.21
PTPA-208	ENST00000411917	TRAV12-1	A0A0B4J245	112 aa		13.74	□□□□□ -0.21
PTPA-208	ENST00000411917	IFITM10	A6NMD0	228 aa		13.74	□□□□□ -0.21
PTPA-208	ENST00000411917	CCL25	O15444	150 aa		13.74	□□□□□ -0.21
PTPA-208	ENST00000411917	SPATA12	Q7Z6I5	190 aa		13.74	□□□□□ -0.21
PTPA-208	ENST00000411917	PRR34	Q9NV39	138 aa		13.74	□□□□□ -0.21
PTPA-208	ENST00000411917	TRAV9-2	A0A087WT02	112 aa		13.73	□□□□□ -0.21
PTPA-208	ENST00000411917	ALMS1	Q8TCU4	4167 aa		13.72	□□□□□ -0.21
PTPA-208	ENST00000411917	DNAH1	Q9P2D7	4330 aa		13.72	□□□□□ -0.21
PTPA-208	ENST00000411917	IGLV4-60	A0A075B6I1	120 aa		13.72	□□□□□ -0.21
PTPA-208	ENST00000411917	TEX43	Q6ZNM6	134 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917		Q6ZUT4	128 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917	FAM19A3	Q7Z5A8	133 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917		Q8N976	141 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917	BAALC	Q8WXS3	180 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917	MAP1LC3C	Q9BXW4	147 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917	VCX2	Q9H322	139 aa		13.71	□□□□□ -0.21
PTPA-208	ENST00000411917	LYST	Q99698	3801 aa		13.7	□□□□□ -0.22
PTPA-208	ENST00000411917	FABP4	P15090	132 aa		13.7	□□□□□ -0.22
PTPA-208	ENST00000411917	PMVK	Q15126	192 aa		13.7	□□□□□ -0.22
PTPA-208	ENST00000411917	TTC32	Q5I0X7	151 aa		13.7	□□□□□ -0.22
PTPA-208	ENST00000411917	C2orf88	Q9BSF0	95 aa		13.7	□□□□□ -0.22
PTPA-208	ENST00000411917	LINC00173	Q6ZV60	143 aa		13.69	□□□□□ -0.22
PTPA-208	ENST00000411917	LINC00476	Q8WZB0	136 aa		13.69	□□□□□ -0.22
PTPA-208	ENST00000411917	IBA57-AS1	B1ANH7	110 aa		13.68	□□□□□ -0.22
PTPA-208	ENST00000411917	ANG	P03950	147 aa	Known RBP	13.68	□□□□□ -0.22
PTPA-208	ENST00000411917	AKR1D1	P51857	326 aa		13.68	□□□□□ -0.22
PTPA-208	ENST00000411917	PET117	Q6UWS5	81 aa		13.68	□□□□□ -0.22
PTPA-208	ENST00000411917	CST9L	Q9H4G1	147 aa		13.68	□□□□□ -0.22
PTPA-208	ENST00000411917	SYS1-DBNDD2	H3BUS1	97 aa		13.67	□□□□□ -0.22
PTPA-208	ENST00000411917	DNAH6	Q9C0G6	4158 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	TRAV8-4	A0A0B4J246	113 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	IGHV3-30	P01768	117 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	IGHV3-33	P01772	117 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	PRSS1	P07477	247 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	IGHV3-30-3	P0DP02	117 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	IGHV3-30-5	P0DP03	117 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	SEC11A	P67812	179 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	REG3A	Q06141	175 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	MIA	Q16674	131 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	LINC00269	Q8N2A0	174 aa		13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	OPRPN	Q99935	248 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPA-208	ENST00000411917	PRSS29P	A6NIE9	313 aa		13.65	□□□□□ -0.22
PTPA-208	ENST00000411917	C3orf79	P0CE67	100 aa		13.65	□□□□□ -0.22
PTPA-208	ENST00000411917		Q8N3U1	123 aa		13.65	□□□□□ -0.22
PTPA-208	ENST00000411917	KLK12	Q9UKR0	248 aa		13.65	□□□□□ -0.22
PTPA-208	ENST00000411917	TRAV8-3	A0A0A6YYJ7	113 aa		13.64	□□□□□ -0.23
PTPA-208	ENST00000411917	UBE2D1	P51668	147 aa		13.64	□□□□□ -0.23
PTPA-208	ENST00000411917	NBDY	A0A0U1RRE5	68 aa		13.63	□□□□□ -0.23
PTPA-208	ENST00000411917	CRP	P02741	224 aa		13.63	□□□□□ -0.23
PTPA-208	ENST00000411917	ODF1	Q14990	250 aa		13.63	□□□□□ -0.23
PTPA-208	ENST00000411917	LINC01545	Q5VT33	79 aa		13.63	□□□□□ -0.23
PTPA-208	ENST00000411917	ENHO	Q6UWT2	76 aa		13.63	□□□□□ -0.23
PTPA-208	ENST00000411917	LINC00959	A0A1B0GUT2	108 aa		13.62	□□□□□ -0.23
PTPA-208	ENST00000411917		F8VRH5	84 aa		13.62	□□□□□ -0.23
PTPA-208	ENST00000411917	TINCR	A0A1B0GVN0	87 aa		13.61	□□□□□ -0.23
PTPA-208	ENST00000411917	C20orf202	A1L168	122 aa		13.61	□□□□□ -0.23
PTPA-208	ENST00000411917	IGLC3	P0DOY3	106 aa		13.61	□□□□□ -0.23
PTPA-208	ENST00000411917	SS18	Q15532	418 aa		13.61	□□□□□ -0.23
PTPA-208	ENST00000411917	NFE4	Q86UQ8	179 aa		13.61	□□□□□ -0.23
PTPA-208	ENST00000411917	KRTDAP	P60985	99 aa		13.6	□□□□□ -0.23
PTPA-208	ENST00000411917	HERVK_113	P63121	156 aa		13.6	□□□□□ -0.23
PTPA-208	ENST00000411917	OR10D4P	Q8NGN7	298 aa		13.6	□□□□□ -0.23
PTPA-208	ENST00000411917	RMI2	Q96E14	147 aa		13.6	□□□□□ -0.23
PTPA-208	ENST00000411917	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.6	□□□□□ -0.23
PTPA-208	ENST00000411917	COX11	Q9Y6N1	276 aa		13.6	□□□□□ -0.23
PTPA-208	ENST00000411917	IGLV5-45	A0A087WSX0	123 aa		13.59	□□□□□ -0.23
PTPA-208	ENST00000411917	PLN	P26678	52 aa		13.59	□□□□□ -0.23
PTPA-208	ENST00000411917	RNASE13	Q5GAN3	156 aa	Known RBP	13.59	□□□□□ -0.23
PTPA-208	ENST00000411917		Q6ZR54	194 aa		13.59	□□□□□ -0.23
PTPA-208	ENST00000411917	UBE2W	Q96B02	151 aa		13.59	□□□□□ -0.23
PTPA-208	ENST00000411917	IGLV4-69	A0A075B6H9	119 aa		13.58	□□□□□ -0.24
PTPA-208	ENST00000411917	TRAV13-1	A0A0B4J241	112 aa		13.58	□□□□□ -0.24
PTPA-208	ENST00000411917	LY6G6C	O95867	125 aa		13.58	□□□□□ -0.24
PTPA-208	ENST00000411917	LINC00242	Q5T6M2	205 aa		13.58	□□□□□ -0.24
PTPA-208	ENST00000411917	CD164L2	Q6UWJ8	174 aa		13.57	□□□□□ -0.24
PTPA-208	ENST00000411917	LINC01561	Q8N1V8	128 aa		13.57	□□□□□ -0.24
PTPA-208	ENST00000411917	KRTAP1-5	Q9BYS1	174 aa		13.57	□□□□□ -0.24
PTPA-208	ENST00000411917	MRPL35	Q9NZE8	188 aa	Known RBP	13.57	□□□□□ -0.24
PTPA-208	ENST00000411917	ZC2HC1B	Q5TFG8	222 aa		13.56	□□□□□ -0.24
PTPA-208	ENST00000411917	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.55	□□□□□ -0.24
PTPA-208	ENST00000411917	DPM2	O94777	84 aa		13.55	□□□□□ -0.24
PTPA-208	ENST00000411917	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPA-208	ENST00000411917	C1orf43	Q9BWL3	253 aa		13.55	□□□□□ -0.24
PTPA-208	ENST00000411917	LCE6A	A0A183	80 aa		13.54	□□□□□ -0.24
PTPA-208	ENST00000411917	JOSD1	Q15040	202 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPA-208	ENST00000411917	KRTAP26-1	Q6PEX3	210 aa		13.54	□□□□□ -0.24
PTPA-208	ENST00000411917	TM2D2	Q9BX73	214 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms