RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 A0A096LNI7 61 aa18.48■□□□□ 0.55
SPIRE1-202ENST00000409402 PIEZO1Q92508 2521 aa18.48■□□□□ 0.55
SPIRE1-202ENST00000409402 IGHV4-30-4P0DP06 118 aa18.47■□□□□ 0.55
SPIRE1-202ENST00000409402 XAGE1AQ9HD64 81 aa18.47■□□□□ 0.55
SPIRE1-202ENST00000409402 HIVEP3Q5T1R4 2406 aa18.47■□□□□ 0.55
SPIRE1-202ENST00000409402 ARHGAP21Q5T5U3 1957 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 KLLNB2CW77 178 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 ATOX1O00244 68 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 NCOR2Q9Y618 2525 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 A0A0J9YWU9 116 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 WFDC2Q14508 124 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 DCANP1Q8TF63 244 aa18.46■□□□□ 0.55
SPIRE1-202ENST00000409402 TRBV6-5A0A0K0K1A5 114 aa18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 SPANXB1Q9NS25 103 aaPredicted RBP18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 CLUHP3Q96NS8 147 aa18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 WNK1Q9H4A3 2382 aa18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 CD164L2Q6UWJ8 174 aa18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 RNF185Q96GF1 192 aa18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 TRBV27A0A0K0K1C4 114 aa18.45■□□□□ 0.54
SPIRE1-202ENST00000409402 PRR14LQ5THK1 2151 aa18.44■□□□□ 0.54
SPIRE1-202ENST00000409402 RNASE3P12724 160 aaKnown RBP18.44■□□□□ 0.54
SPIRE1-202ENST00000409402 PCNX3Q9H6A9 2034 aa18.44■□□□□ 0.54
SPIRE1-202ENST00000409402 IGLV2-11P01706 119 aa18.44■□□□□ 0.54
SPIRE1-202ENST00000409402 PYGO1Q9Y3Y4 419 aa18.44■□□□□ 0.54
SPIRE1-202ENST00000409402 NANOS2P60321 138 aaKnown RBP18.44■□□□□ 0.54
SPIRE1-202ENST00000409402 TAX1BP3O14907 124 aa18.43■□□□□ 0.54
SPIRE1-202ENST00000409402 U3KQK5 164 aa18.42■□□□□ 0.54
SPIRE1-202ENST00000409402 NAV3Q8IVL0 2385 aa18.42■□□□□ 0.54
SPIRE1-202ENST00000409402 LOC100131303A0A0U1RQF7 123 aa18.41■□□□□ 0.54
SPIRE1-202ENST00000409402 SMIM20Q8N5G0 67 aa18.41■□□□□ 0.54
SPIRE1-202ENST00000409402 PRR9Q5T870 116 aa18.41■□□□□ 0.54
SPIRE1-202ENST00000409402 BPY2O14599 106 aa18.4■□□□□ 0.54
SPIRE1-202ENST00000409402 LINC00308Q8TCZ7 52 aa18.4■□□□□ 0.54
SPIRE1-202ENST00000409402 FOXI1Q12951 378 aa18.4■□□□□ 0.54
SPIRE1-202ENST00000409402 C9orf85Q96MD7 179 aa18.4■□□□□ 0.54
SPIRE1-202ENST00000409402 IGLV4-69A0A075B6H9 119 aa18.39■□□□□ 0.53
SPIRE1-202ENST00000409402 TSHBP01222 138 aa18.38■□□□□ 0.53
SPIRE1-202ENST00000409402 C5orf47Q569G3 176 aa18.38■□□□□ 0.53
SPIRE1-202ENST00000409402 MRGPRG-AS1Q2M3A8 158 aa18.38■□□□□ 0.53
SPIRE1-202ENST00000409402 FAM236AA0A1B0GUQ0 79 aa18.38■□□□□ 0.53
SPIRE1-202ENST00000409402 FAM236BA0A1B0GV22 79 aa18.38■□□□□ 0.53
SPIRE1-202ENST00000409402 UBE2D1P51668 147 aa18.38■□□□□ 0.53
SPIRE1-202ENST00000409402 PIK3CD-AS1Q5SR53 167 aa18.37■□□□□ 0.53
SPIRE1-202ENST00000409402 IGKV4-1P06312 121 aa18.37■□□□□ 0.53
SPIRE1-202ENST00000409402 TCL1BO95988 128 aa18.36■□□□□ 0.53
SPIRE1-202ENST00000409402 CCDC168Q8NDH2 2452 aa18.36■□□□□ 0.53
SPIRE1-202ENST00000409402 LOC107984640A0A0U1RRK4 108 aa18.36■□□□□ 0.53
SPIRE1-202ENST00000409402 NUPR2A6NF83 97 aa18.36■□□□□ 0.53
SPIRE1-202ENST00000409402 LRP4O75096 1905 aa18.36■□□□□ 0.53
SPIRE1-202ENST00000409402 LINC00959A0A1B0GUT2 108 aa18.35■□□□□ 0.53
SPIRE1-202ENST00000409402 ZNF706Q9Y5V0 76 aaPredicted RBP18.35■□□□□ 0.53
SPIRE1-202ENST00000409402 C11orf21Q9P2W6 132 aa18.34■□□□□ 0.53
SPIRE1-202ENST00000409402 SORL1Q92673 2214 aa18.34■□□□□ 0.53
SPIRE1-202ENST00000409402 TRAV23DV6A0A075B6W5 121 aa18.34■□□□□ 0.53
SPIRE1-202ENST00000409402 PRM2P04554 102 aa18.34■□□□□ 0.53
SPIRE1-202ENST00000409402 C16orf95Q9H693 158 aa18.34■□□□□ 0.53
SPIRE1-202ENST00000409402 IGF2RP11717 2491 aa18.33■□□□□ 0.52
SPIRE1-202ENST00000409402 UPK3BQ9BT76 320 aa18.33■□□□□ 0.52
SPIRE1-202ENST00000409402 PRRC2AP48634 2157 aaKnown RBP18.32■□□□□ 0.52
SPIRE1-202ENST00000409402 ODF3L2Q3SX64 289 aa18.32■□□□□ 0.52
SPIRE1-202ENST00000409402 KIAA1549Q9HCM3 1950 aa18.32■□□□□ 0.52
SPIRE1-202ENST00000409402 UBE2D4Q9Y2X8 147 aa18.32■□□□□ 0.52
SPIRE1-202ENST00000409402 IGKV2-28A0A075B6P5 120 aa18.31■□□□□ 0.52
SPIRE1-202ENST00000409402 IGKV2D-28P01615 120 aa18.31■□□□□ 0.52
SPIRE1-202ENST00000409402 IGLV1-51P01701 117 aa18.31■□□□□ 0.52
SPIRE1-202ENST00000409402 M0R378 163 aa18.3■□□□□ 0.52
SPIRE1-202ENST00000409402 MRPS36P82909 103 aaKnown RBP18.3■□□□□ 0.52
SPIRE1-202ENST00000409402 NRACQ8N912 160 aa18.3■□□□□ 0.52
SPIRE1-202ENST00000409402 LINC00526Q96FQ7 95 aa18.3■□□□□ 0.52
SPIRE1-202ENST00000409402 CRIP2P52943 208 aaPredicted RBP18.3■□□□□ 0.52
SPIRE1-202ENST00000409402 LINC00474Q9P2X8 69 aa18.3■□□□□ 0.52
SPIRE1-202ENST00000409402 C6orf99Q4VX62 202 aa18.29■□□□□ 0.52
SPIRE1-202ENST00000409402 A0A1W2PPR1 153 aa18.29■□□□□ 0.52
SPIRE1-202ENST00000409402 SEC61GP60059 68 aa18.29■□□□□ 0.52
SPIRE1-202ENST00000409402 UBE2D3P61077 147 aa18.28■□□□□ 0.52
SPIRE1-202ENST00000409402 UBE2D2P62837 147 aa18.28■□□□□ 0.52
SPIRE1-202ENST00000409402 PTH2Q96A98 100 aa18.28■□□□□ 0.52
SPIRE1-202ENST00000409402 SLPIP03973 132 aa18.27■□□□□ 0.52
SPIRE1-202ENST00000409402 COL5A1P20908 1838 aaPredicted RBP18.27■□□□□ 0.52
SPIRE1-202ENST00000409402 DHRS4-AS1Q9P1J3 65 aa18.27■□□□□ 0.51
SPIRE1-202ENST00000409402 RETNQ9HD89 108 aa18.26■□□□□ 0.51
SPIRE1-202ENST00000409402 LINC00643Q86TS7 51 aa18.25■□□□□ 0.51
SPIRE1-202ENST00000409402 PTPRSQ13332 1948 aa18.25■□□□□ 0.51
SPIRE1-202ENST00000409402 EDN2P20800 178 aa18.25■□□□□ 0.51
SPIRE1-202ENST00000409402 TIMM17BO60830 172 aa18.25■□□□□ 0.51
SPIRE1-202ENST00000409402 B5MCH6 92 aa18.24■□□□□ 0.51
SPIRE1-202ENST00000409402 POLR2KP53803 58 aaKnown RBP18.24■□□□□ 0.51
SPIRE1-202ENST00000409402 A8MZ25 164 aa18.23■□□□□ 0.51
SPIRE1-202ENST00000409402 PPDPFQ9H3Y8 114 aa18.23■□□□□ 0.51
SPIRE1-202ENST00000409402 CASC2Q6XLA1 102 aa18.22■□□□□ 0.51
SPIRE1-202ENST00000409402 MAPKAPK5-AS1Q8N8E1 139 aa18.22■□□□□ 0.51
SPIRE1-202ENST00000409402 DSCAML1Q8TD84 2053 aa18.21■□□□□ 0.51
SPIRE1-202ENST00000409402 MYO18BQ8IUG5 2567 aa18.21■□□□□ 0.51
SPIRE1-202ENST00000409402 COX17Q14061 63 aa18.21■□□□□ 0.51
SPIRE1-202ENST00000409402 ZNF580Q9UK33 172 aa18.2■□□□□ 0.5
SPIRE1-202ENST00000409402 SS18L2Q9UHA2 77 aa18.19■□□□□ 0.5
SPIRE1-202ENST00000409402 C1orf158Q8N1D5 194 aa18.19■□□□□ 0.5
SPIRE1-202ENST00000409402 BRI3O95415 125 aa18.18■□□□□ 0.5
SPIRE1-202ENST00000409402 CDC42SE2Q9NRR3 84 aa18.18■□□□□ 0.5
SPIRE1-202ENST00000409402 PLAC8L1A1L4L8 177 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms