RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 IMMP2LQ96T52 175 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 SMIM2Q9BVW6 85 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 KRTAP4-5Q9BYR2 181 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 TCAPO15273 167 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 CLRN3Q8NCR9 226 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 CHCHD10Q8WYQ3 142 aaPredicted RBP11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
PDLIM2-206ENST00000409141 HAMPP81172 84 aa11.69□□□□□ -0.54
PDLIM2-206ENST00000409141 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
PDLIM2-206ENST00000409141 PCLOQ9Y6V0 5065 aa11.68□□□□□ -0.54
PDLIM2-206ENST00000409141 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
PDLIM2-206ENST00000409141 hDV102S1A0JD36 115 aa11.67□□□□□ -0.54
PDLIM2-206ENST00000409141 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
PDLIM2-206ENST00000409141 C10orf91Q5T1B1 145 aa11.66□□□□□ -0.54
PDLIM2-206ENST00000409141 LAMTOR2Q9Y2Q5 125 aa11.66□□□□□ -0.54
PDLIM2-206ENST00000409141 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
PDLIM2-206ENST00000409141 SMR3BP02814 79 aaPredicted RBP11.65□□□□□ -0.54
PDLIM2-206ENST00000409141 RAB5AP20339 215 aa11.65□□□□□ -0.54
PDLIM2-206ENST00000409141 XCL1P47992 114 aa11.65□□□□□ -0.54
PDLIM2-206ENST00000409141 SS18Q15532 418 aa11.65□□□□□ -0.54
PDLIM2-206ENST00000409141 CFAP161Q6P656 301 aa11.65□□□□□ -0.54
PDLIM2-206ENST00000409141 CCL25O15444 150 aa11.64□□□□□ -0.55
PDLIM2-206ENST00000409141 S100PP25815 95 aa11.64□□□□□ -0.55
PDLIM2-206ENST00000409141 Q6ZSA8 131 aa11.64□□□□□ -0.55
PDLIM2-206ENST00000409141 TIMM21Q9BVV7 248 aa11.64□□□□□ -0.55
PDLIM2-206ENST00000409141 ABCA13Q86UQ4 5058 aa11.64□□□□□ -0.55
PDLIM2-206ENST00000409141 TRAV9-1A0A075B6T8 112 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 RPL39P62891 51 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 AP5S1Q9NUS5 200 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 PRSS47A8MTI9 375 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 EPM2AB3EWF7 344 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 FOXI1Q12951 378 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
PDLIM2-206ENST00000409141 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
PDLIM2-206ENST00000409141 RPS10P5Q9NQ39 176 aa11.62□□□□□ -0.55
PDLIM2-206ENST00000409141 CNBPP62633 177 aaKnown RBP11.61□□□□□ -0.55
PDLIM2-206ENST00000409141 RHEBQ15382 184 aa11.61□□□□□ -0.55
PDLIM2-206ENST00000409141 Q6ZUT4 128 aa11.61□□□□□ -0.55
PDLIM2-206ENST00000409141 DNAH8Q96JB1 4490 aa11.6□□□□□ -0.55
PDLIM2-206ENST00000409141 C1orf196B1AJZ1 125 aa11.6□□□□□ -0.55
PDLIM2-206ENST00000409141 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
PDLIM2-206ENST00000409141 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
PDLIM2-206ENST00000409141 Q8N8P6 123 aa11.6□□□□□ -0.55
PDLIM2-206ENST00000409141 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
PDLIM2-206ENST00000409141 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
PDLIM2-206ENST00000409141 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
PDLIM2-206ENST00000409141 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
PDLIM2-206ENST00000409141 SLPIP03973 132 aa11.58□□□□□ -0.56
PDLIM2-206ENST00000409141 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.56
PDLIM2-206ENST00000409141 Q5VSD8 79 aa11.58□□□□□ -0.56
PDLIM2-206ENST00000409141 CHAC1Q9BUX1 264 aa11.58□□□□□ -0.56
PDLIM2-206ENST00000409141 APOC3P02656 99 aa11.57□□□□□ -0.56
PDLIM2-206ENST00000409141 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
PDLIM2-206ENST00000409141 OPRPNQ99935 248 aaPredicted RBP11.57□□□□□ -0.56
PDLIM2-206ENST00000409141 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
PDLIM2-206ENST00000409141 GNB1LQ9BYB4 327 aa11.57□□□□□ -0.56
PDLIM2-206ENST00000409141 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
PDLIM2-206ENST00000409141 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
PDLIM2-206ENST00000409141 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
PDLIM2-206ENST00000409141 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
PDLIM2-206ENST00000409141 NDUFA5Q16718 116 aa11.56□□□□□ -0.56
PDLIM2-206ENST00000409141 FAM104AQ969W3 186 aa11.56□□□□□ -0.56
PDLIM2-206ENST00000409141 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
PDLIM2-206ENST00000409141 COX19Q49B96 90 aa11.55□□□□□ -0.56
PDLIM2-206ENST00000409141 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
PDLIM2-206ENST00000409141 NXT2Q9NPJ8 142 aaKnown RBP11.55□□□□□ -0.56
PDLIM2-206ENST00000409141 MALP21145 153 aa11.54□□□□□ -0.56
PDLIM2-206ENST00000409141 ORMDL2Q53FV1 153 aa11.54□□□□□ -0.56
PDLIM2-206ENST00000409141 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
PDLIM2-206ENST00000409141 K7EMI3 77 aa11.53□□□□□ -0.56
PDLIM2-206ENST00000409141 COX7A2LO14548 114 aa11.53□□□□□ -0.56
PDLIM2-206ENST00000409141 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
PDLIM2-206ENST00000409141 FAT1Q14517 4588 aa11.52□□□□□ -0.56
PDLIM2-206ENST00000409141 IFITM10A6NMD0 228 aa11.52□□□□□ -0.56
PDLIM2-206ENST00000409141 SNAPINO95295 136 aa11.52□□□□□ -0.56
PDLIM2-206ENST00000409141 C2orf66Q6UXQ4 117 aa11.52□□□□□ -0.56
PDLIM2-206ENST00000409141 SVBPQ8N300 66 aa11.52□□□□□ -0.56
PDLIM2-206ENST00000409141 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 MT-ND6P03923 174 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 LINC00528Q8N1L1 170 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 IGLV4-3A0A075B6K6 122 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 FABP9Q0Z7S8 132 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 PRSS3P2Q8NHM4 247 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 TMEM141Q96I45 108 aa11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 ALKBH7Q9BT30 221 aaPredicted RBP11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
PDLIM2-206ENST00000409141 PANO1I0J062 215 aa11.5□□□□□ -0.57
PDLIM2-206ENST00000409141 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms