RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 AVPP01185 164 aa12.17□□□□□ -0.46
CBX6-202ENST00000407418 ABCA1O95477 2261 aa12.16□□□□□ -0.46
CBX6-202ENST00000407418 RBX1P62877 108 aa12.16□□□□□ -0.46
CBX6-202ENST00000407418 FAM208BQ5VWN6 2430 aa12.16□□□□□ -0.46
CBX6-202ENST00000407418 CREBBPQ92793 2442 aa12.15□□□□□ -0.46
CBX6-202ENST00000407418 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
CBX6-202ENST00000407418 FAM236DA0A1B0GTK5 79 aa12.15□□□□□ -0.46
CBX6-202ENST00000407418 FAM236CP0DP71 79 aa12.15□□□□□ -0.46
CBX6-202ENST00000407418 BRWD1-AS2P59051 145 aa12.15□□□□□ -0.46
CBX6-202ENST00000407418 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
CBX6-202ENST00000407418 M0QY20 66 aa12.15□□□□□ -0.47
CBX6-202ENST00000407418 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
CBX6-202ENST00000407418 PLAC8L1A1L4L8 177 aa12.14□□□□□ -0.47
CBX6-202ENST00000407418 RETNQ9HD89 108 aa12.14□□□□□ -0.47
CBX6-202ENST00000407418 C11orf1Q9H5F2 150 aa12.14□□□□□ -0.47
CBX6-202ENST00000407418 DOCK11Q5JSL3 2073 aa12.14□□□□□ -0.47
CBX6-202ENST00000407418 MRPL55Q7Z7F7 128 aaKnown RBP12.13□□□□□ -0.47
CBX6-202ENST00000407418 C3orf22Q8N5N4 141 aa12.13□□□□□ -0.47
CBX6-202ENST00000407418 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
CBX6-202ENST00000407418 COL5A1P20908 1838 aaPredicted RBP12.13□□□□□ -0.47
CBX6-202ENST00000407418 UQCRQO14949 82 aa12.13□□□□□ -0.47
CBX6-202ENST00000407418 XAGE1AQ9HD64 81 aa12.13□□□□□ -0.47
CBX6-202ENST00000407418 DHRS4-AS1Q9P1J3 65 aa12.13□□□□□ -0.47
CBX6-202ENST00000407418 A0A0J9YXY3 114 aa12.12□□□□□ -0.47
CBX6-202ENST00000407418 TEX49A0A1B0GTD5 131 aa12.12□□□□□ -0.47
CBX6-202ENST00000407418 C1orf134Q5TEV5 83 aa12.12□□□□□ -0.47
CBX6-202ENST00000407418 EP400Q96L91 3159 aa12.12□□□□□ -0.47
CBX6-202ENST00000407418 IGLV4-3A0A075B6K6 122 aa12.12□□□□□ -0.47
CBX6-202ENST00000407418 M0R378 163 aa12.12□□□□□ -0.47
CBX6-202ENST00000407418 BPY2O14599 106 aa12.11□□□□□ -0.47
CBX6-202ENST00000407418 ZNF295-AS1Q8N0V1 137 aa12.11□□□□□ -0.47
CBX6-202ENST00000407418 NDUFC2-KCTD14E9PQ53 114 aa12.11□□□□□ -0.47
CBX6-202ENST00000407418 IGLV1-51P01701 117 aa12.11□□□□□ -0.47
CBX6-202ENST00000407418 PROK1P58294 105 aa12.11□□□□□ -0.47
CBX6-202ENST00000407418 CDKN2A-AS1Q9UH64 79 aa12.1□□□□□ -0.47
CBX6-202ENST00000407418 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
CBX6-202ENST00000407418 UBE2D2P62837 147 aa12.1□□□□□ -0.47
CBX6-202ENST00000407418 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
CBX6-202ENST00000407418 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
CBX6-202ENST00000407418 C20orf197Q8N268 126 aa12.09□□□□□ -0.47
CBX6-202ENST00000407418 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
CBX6-202ENST00000407418 DCANP1Q8TF63 244 aa12.08□□□□□ -0.48
CBX6-202ENST00000407418 IGKV2-28A0A075B6P5 120 aa12.08□□□□□ -0.48
CBX6-202ENST00000407418 IGKV2D-28P01615 120 aa12.08□□□□□ -0.48
CBX6-202ENST00000407418 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
CBX6-202ENST00000407418 ENHOQ6UWT2 76 aa12.08□□□□□ -0.48
CBX6-202ENST00000407418 PPDPFQ9H3Y8 114 aa12.08□□□□□ -0.48
CBX6-202ENST00000407418 LINC00959A0A1B0GUT2 108 aa12.07□□□□□ -0.48
CBX6-202ENST00000407418 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
CBX6-202ENST00000407418 RPL28P46779 137 aaKnown RBP12.07□□□□□ -0.48
CBX6-202ENST00000407418 MLST8Q9BVC4 326 aa12.07□□□□□ -0.48
CBX6-202ENST00000407418 OTOGLQ3ZCN5 2332 aa12.07□□□□□ -0.48
CBX6-202ENST00000407418 KLLNB2CW77 178 aa12.07□□□□□ -0.48
CBX6-202ENST00000407418 BRI3O95415 125 aa12.06□□□□□ -0.48
CBX6-202ENST00000407418 Q6ZPA2 131 aa12.06□□□□□ -0.48
CBX6-202ENST00000407418 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
CBX6-202ENST00000407418 PYGO1Q9Y3Y4 419 aa12.06□□□□□ -0.48
CBX6-202ENST00000407418 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
CBX6-202ENST00000407418 HRCT1Q6UXD1 115 aa12.05□□□□□ -0.48
CBX6-202ENST00000407418 ARHGAP21Q5T5U3 1957 aa12.05□□□□□ -0.48
CBX6-202ENST00000407418 SCXQ7RTU7 201 aa12.05□□□□□ -0.48
CBX6-202ENST00000407418 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
CBX6-202ENST00000407418 IGLV2-8P01709 118 aa12.05□□□□□ -0.48
CBX6-202ENST00000407418 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
CBX6-202ENST00000407418 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
CBX6-202ENST00000407418 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
CBX6-202ENST00000407418 IGLV9-49A0A0B4J1Y8 123 aa12.04□□□□□ -0.48
CBX6-202ENST00000407418 CRIP3Q6Q6R5 217 aa12.04□□□□□ -0.48
CBX6-202ENST00000407418 V9GYY9 64 aa12.04□□□□□ -0.48
CBX6-202ENST00000407418 CRIP2P52943 208 aaPredicted RBP12.03□□□□□ -0.48
CBX6-202ENST00000407418 ATP5EP2Q5VTU8 51 aa12.03□□□□□ -0.48
CBX6-202ENST00000407418 SLPIP03973 132 aa12.03□□□□□ -0.48
CBX6-202ENST00000407418 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
CBX6-202ENST00000407418 COX17Q14061 63 aa12.03□□□□□ -0.48
CBX6-202ENST00000407418 LRP4O75096 1905 aa12.03□□□□□ -0.48
CBX6-202ENST00000407418 ODF3L2Q3SX64 289 aa12.03□□□□□ -0.48
CBX6-202ENST00000407418 USP17L23D6RBM5 183 aa12.02□□□□□ -0.49
CBX6-202ENST00000407418 MUC7Q8TAX7 377 aa12.02□□□□□ -0.49
CBX6-202ENST00000407418 ZNF580Q9UK33 172 aa12.02□□□□□ -0.49
CBX6-202ENST00000407418 TRBV27A0A0K0K1C4 114 aa12.01□□□□□ -0.49
CBX6-202ENST00000407418 RPL37AP8A6NKH3 93 aa12.01□□□□□ -0.49
CBX6-202ENST00000407418 TSHBP01222 138 aa12.01□□□□□ -0.49
CBX6-202ENST00000407418 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
CBX6-202ENST00000407418 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
CBX6-202ENST00000407418 Q6ZTC4 211 aa12.01□□□□□ -0.49
CBX6-202ENST00000407418 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
CBX6-202ENST00000407418 M0QXV9 152 aa11.99□□□□□ -0.49
CBX6-202ENST00000407418 LINC00526Q96FQ7 95 aa11.99□□□□□ -0.49
CBX6-202ENST00000407418 TRIAP1O43715 76 aa11.99□□□□□ -0.49
CBX6-202ENST00000407418 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
CBX6-202ENST00000407418 CRIP1P50238 77 aa11.99□□□□□ -0.49
CBX6-202ENST00000407418 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
CBX6-202ENST00000407418 PCDH15Q96QU1 1955 aa11.97□□□□□ -0.49
CBX6-202ENST00000407418 PRR9Q5T870 116 aa11.97□□□□□ -0.49
CBX6-202ENST00000407418 PTPRSQ13332 1948 aa11.97□□□□□ -0.49
CBX6-202ENST00000407418 C6orf99Q4VX62 202 aa11.97□□□□□ -0.49
CBX6-202ENST00000407418 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
CBX6-202ENST00000407418 NCOA6Q14686 2063 aaPredicted RBP11.97□□□□□ -0.49
CBX6-202ENST00000407418 MAPKAPK5-AS1Q8N8E1 139 aa11.97□□□□□ -0.49
CBX6-202ENST00000407418 RNF185Q96GF1 192 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms