RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 C10orf105Q8TEF2 133 aa16.22■□□□□ 0.19
CUEDC1-202ENST00000407144 POLEQ07864 2286 aa16.22■□□□□ 0.19
CUEDC1-202ENST00000407144 CHCHD7Q9BUK0 85 aa16.21■□□□□ 0.19
CUEDC1-202ENST00000407144 Q9HAA7 133 aa16.21■□□□□ 0.19
CUEDC1-202ENST00000407144 C19orf54Q5BKX5 351 aa16.21■□□□□ 0.19
CUEDC1-202ENST00000407144 TRAV13-2A0A0B4J235 113 aa16.2■□□□□ 0.18
CUEDC1-202ENST00000407144 F8WDY8 70 aa16.2■□□□□ 0.18
CUEDC1-202ENST00000407144 IGHV1OR15-1A0A075B7D0 117 aa16.2■□□□□ 0.18
CUEDC1-202ENST00000407144 RS1O15537 224 aa16.2■□□□□ 0.18
CUEDC1-202ENST00000407144 HELZ2Q9BYK8 2649 aaKnown RBP16.2■□□□□ 0.18
CUEDC1-202ENST00000407144 C14orf132Q9NPU4 83 aa16.19■□□□□ 0.18
CUEDC1-202ENST00000407144 FASNP49327 2511 aaKnown RBP16.18■□□□□ 0.18
CUEDC1-202ENST00000407144 SERP1Q9Y6X1 66 aa16.18■□□□□ 0.18
CUEDC1-202ENST00000407144 TRAV12-2A0A075B6T6 113 aa16.17■□□□□ 0.18
CUEDC1-202ENST00000407144 Q8NA96 180 aa16.17■□□□□ 0.18
CUEDC1-202ENST00000407144 RHPN1-AS1Q9BWJ2 59 aa16.17■□□□□ 0.18
CUEDC1-202ENST00000407144 FAM236DA0A1B0GTK5 79 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 FAM236CP0DP71 79 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 S100A7L2Q5SY68 101 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 ATP5EP2Q5VTU8 51 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 GCN1Q92616 2671 aaKnown RBP16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 TENM4Q6N022 2769 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 TRBV12-3P01733 135 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 C5orf56Q8N8D9 126 aa16.16■□□□□ 0.18
CUEDC1-202ENST00000407144 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.15■□□□□ 0.18
CUEDC1-202ENST00000407144 IGKV3-7A0A075B6H7 116 aa16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 J3QLI3 93 aa16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 TMEM243Q9BU79 118 aa16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 C9orf129Q5T035 196 aaKnown RBP16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 ZNF625Q96I27 306 aaPredicted RBP16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 SIRPDQ9H106 197 aa16.14■□□□□ 0.17
CUEDC1-202ENST00000407144 H0YGX0 51 aa16.13■□□□□ 0.17
CUEDC1-202ENST00000407144 GHRHP01286 108 aa16.13■□□□□ 0.17
CUEDC1-202ENST00000407144 FAM19A3Q7Z5A8 133 aa16.13■□□□□ 0.17
CUEDC1-202ENST00000407144 LINC00336Q6ZUF6 198 aa16.13■□□□□ 0.17
CUEDC1-202ENST00000407144 ZNF843Q8N446 348 aa16.13■□□□□ 0.17
CUEDC1-202ENST00000407144 RBMY1BA6NDE4 496 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-202ENST00000407144 RBMY1EA6NEQ0 496 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-202ENST00000407144 RBMY1DP0C7P1 496 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-202ENST00000407144 RBMY1A1P0DJD3 496 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-202ENST00000407144 RBMY1CP0DJD4 496 aa16.12■□□□□ 0.17
CUEDC1-202ENST00000407144 RBMY1FQ15415 496 aaKnown RBP16.12■□□□□ 0.17
CUEDC1-202ENST00000407144 A0A0U1RRA0 63 aa16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 CRPP02741 224 aa16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 IGKV2-29A2NJV5 120 aaPredicted RBP16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 HOXD3P31249 432 aaPredicted RBP16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 LINC00467Q9BRT7 94 aa16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 UBR5O95071 2799 aaPredicted RBP16.11■□□□□ 0.17
CUEDC1-202ENST00000407144 HIVEP3Q5T1R4 2406 aa16.1■□□□□ 0.17
CUEDC1-202ENST00000407144 USMG5Q96IX5 58 aa16.1■□□□□ 0.17
CUEDC1-202ENST00000407144 COX6A2Q02221 97 aa16.1■□□□□ 0.17
CUEDC1-202ENST00000407144 BCE1O60756 84 aa16.09■□□□□ 0.17
CUEDC1-202ENST00000407144 A0A087WYN8 130 aa16.09■□□□□ 0.17
CUEDC1-202ENST00000407144 SMIM1B2RUZ4 78 aa16.09■□□□□ 0.17
CUEDC1-202ENST00000407144 TRBV10-3A0A0K0K1G6 114 aa16.08■□□□□ 0.16
CUEDC1-202ENST00000407144 CCKP06307 115 aa16.08■□□□□ 0.16
CUEDC1-202ENST00000407144 USP9XQ93008 2570 aaPredicted RBP16.08■□□□□ 0.16
CUEDC1-202ENST00000407144 XCL1P47992 114 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 XCL2Q9UBD3 114 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 CSMD1Q96PZ7 3565 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 H3BUA1 57 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 LINC00242Q5T6M2 205 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 LYPD5Q6UWN5 251 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 PCNX1Q96RV3 2341 aa16.07■□□□□ 0.16
CUEDC1-202ENST00000407144 PIMREGQ9BSJ6 248 aa16.06■□□□□ 0.16
CUEDC1-202ENST00000407144 LRRK2Q5S007 2527 aa16.06■□□□□ 0.16
CUEDC1-202ENST00000407144 LY6HO94772 140 aa16.06■□□□□ 0.16
CUEDC1-202ENST00000407144 UTP20O75691 2785 aaKnown RBP16.06■□□□□ 0.16
CUEDC1-202ENST00000407144 IGHV3OR16-12A0A075B7B8 117 aa16.05■□□□□ 0.16
CUEDC1-202ENST00000407144 K7EMT4 169 aa16.05■□□□□ 0.16
CUEDC1-202ENST00000407144 SAA4P35542 130 aa16.05■□□□□ 0.16
CUEDC1-202ENST00000407144 PIK3CD-AS1Q5SR53 167 aa16.05■□□□□ 0.16
CUEDC1-202ENST00000407144 TACC2O95359 2948 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 PROK1P58294 105 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 ADGRG4Q8IZF6 3080 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 C20orf197Q8N268 126 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 C1orf43Q9BWL3 253 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 MOB4Q9Y3A3 225 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 ZFP36P26651 326 aaKnown RBP16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 LINC00337Q8N6G1 96 aa16.04■□□□□ 0.16
CUEDC1-202ENST00000407144 HILS1P60008 231 aa16.03■□□□□ 0.16
CUEDC1-202ENST00000407144 SMIM11BQ8TCY0 68 aa16.03■□□□□ 0.16
CUEDC1-202ENST00000407144 IGHV3-73A0A0B4J1V6 119 aa16.03■□□□□ 0.16
CUEDC1-202ENST00000407144 H7BZZ5 65 aa16.03■□□□□ 0.16
CUEDC1-202ENST00000407144 DGAT2L7PQ6IED9 249 aa16.03■□□□□ 0.16
CUEDC1-202ENST00000407144 SMIM26A0A096LP01 95 aa16.02■□□□□ 0.16
CUEDC1-202ENST00000407144 IGKV2-28A0A075B6P5 120 aa16.02■□□□□ 0.15
CUEDC1-202ENST00000407144 NCR3O14931 201 aa16.02■□□□□ 0.15
CUEDC1-202ENST00000407144 IGKV2D-28P01615 120 aa16.02■□□□□ 0.15
CUEDC1-202ENST00000407144 C16orf95Q9H693 158 aa16.01■□□□□ 0.15
CUEDC1-202ENST00000407144 TMEM86BQ8N661 226 aa16■□□□□ 0.15
CUEDC1-202ENST00000407144 TRAV23DV6A0A075B6W5 121 aa16■□□□□ 0.15
CUEDC1-202ENST00000407144 SPINK13Q1W4C9 94 aa16■□□□□ 0.15
CUEDC1-202ENST00000407144 SPTBN1Q01082 2364 aaKnown RBP15.98■□□□□ 0.15
CUEDC1-202ENST00000407144 SNRPD3P62318 126 aaKnown RBP15.98■□□□□ 0.15
CUEDC1-202ENST00000407144 SPTAN1Q13813 2472 aaKnown RBP15.98■□□□□ 0.15
CUEDC1-202ENST00000407144 TRAV7A0A075B6U4 112 aa15.97■□□□□ 0.15
CUEDC1-202ENST00000407144 KNCNA6PVL3 124 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 691.3 ms