RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 DAZ2Q13117 558 aaKnown RBP12.05□□□□□ -0.48
NUP50-203ENST00000407019 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
NUP50-203ENST00000407019 C16orf74Q96GX8 76 aa12.05□□□□□ -0.48
NUP50-203ENST00000407019 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
NUP50-203ENST00000407019 CHD6Q8TD26 2715 aa12.05□□□□□ -0.48
NUP50-203ENST00000407019 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 TCL1BO95988 128 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 RPL35AP18077 110 aaKnown RBP12.04□□□□□ -0.48
NUP50-203ENST00000407019 ZFAND6Q6FIF0 208 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 SPANXCQ9NY87 97 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
NUP50-203ENST00000407019 A8MZ25 164 aa12.03□□□□□ -0.48
NUP50-203ENST00000407019 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
NUP50-203ENST00000407019 SMCPP49901 116 aaPredicted RBP12.03□□□□□ -0.48
NUP50-203ENST00000407019 ERG28Q9UKR5 140 aa12.03□□□□□ -0.48
NUP50-203ENST00000407019 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
NUP50-203ENST00000407019 GAGE12JA6NER3 117 aa12.02□□□□□ -0.48
NUP50-203ENST00000407019 NDUFA7O95182 113 aa12.02□□□□□ -0.48
NUP50-203ENST00000407019 GAGE4Q13068 117 aa12.02□□□□□ -0.48
NUP50-203ENST00000407019 GAGE5Q13069 117 aa12.02□□□□□ -0.48
NUP50-203ENST00000407019 C1QTNF4Q9BXJ3 329 aa12.02□□□□□ -0.48
NUP50-203ENST00000407019 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.49
NUP50-203ENST00000407019 LINC00694P0DN24 101 aa12.02□□□□□ -0.49
NUP50-203ENST00000407019 NTM-AS1Q6ZSK4 140 aa12.02□□□□□ -0.49
NUP50-203ENST00000407019 TENM4Q6N022 2769 aa12.02□□□□□ -0.49
NUP50-203ENST00000407019 ANK3Q12955 4377 aaKnown RBP12.01□□□□□ -0.49
NUP50-203ENST00000407019 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
NUP50-203ENST00000407019 CCDC168Q8NDH2 2452 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 PDZD2O15018 2839 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 PRSS2P07478 247 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 HERVK_113P63121 156 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 MIAQ16674 131 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
NUP50-203ENST00000407019 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
NUP50-203ENST00000407019 GAGE7O76087 117 aa12□□□□□ -0.49
NUP50-203ENST00000407019 GAGE12FP0CL80 117 aa12□□□□□ -0.49
NUP50-203ENST00000407019 GAGE12GP0CL81 117 aa12□□□□□ -0.49
NUP50-203ENST00000407019 GAGE12IP0CL82 117 aa12□□□□□ -0.49
NUP50-203ENST00000407019 SMAGPQ0VAQ4 97 aa12□□□□□ -0.49
NUP50-203ENST00000407019 ADAMTSL4-AS1Q5T5F5 129 aa12□□□□□ -0.49
NUP50-203ENST00000407019 SBSPONQ8IVN8 264 aa12□□□□□ -0.49
NUP50-203ENST00000407019 TMEM101Q96IK0 257 aa12□□□□□ -0.49
NUP50-203ENST00000407019 H7C2G1 150 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 COX6A2Q02221 97 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 LINC00242Q5T6M2 205 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.99□□□□□ -0.49
NUP50-203ENST00000407019 CSNK1G2-AS1Q8NCQ2 148 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 NDUFA1O15239 70 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 TIMM17BO60830 172 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 Q1RN00 199 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
NUP50-203ENST00000407019 OVOL2Q9BRP0 275 aa11.98□□□□□ -0.49
NUP50-203ENST00000407019 CIDEAO60543 219 aa11.98□□□□□ -0.49
NUP50-203ENST00000407019 INSL3P51460 131 aa11.98□□□□□ -0.49
NUP50-203ENST00000407019 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
NUP50-203ENST00000407019 CUBNO60494 3623 aa11.97□□□□□ -0.49
NUP50-203ENST00000407019 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
NUP50-203ENST00000407019 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.49
NUP50-203ENST00000407019 FOXI1Q12951 378 aa11.96□□□□□ -0.49
NUP50-203ENST00000407019 TMEM243Q9BU79 118 aa11.96□□□□□ -0.49
NUP50-203ENST00000407019 NF1P21359 2839 aa11.96□□□□□ -0.5
NUP50-203ENST00000407019 TRAV13-1A0A0B4J241 112 aa11.96□□□□□ -0.5
NUP50-203ENST00000407019 UBE2L6O14933 153 aa11.96□□□□□ -0.5
NUP50-203ENST00000407019 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.5
NUP50-203ENST00000407019 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
NUP50-203ENST00000407019 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
NUP50-203ENST00000407019 IFITM1P13164 125 aa11.95□□□□□ -0.5
NUP50-203ENST00000407019 NPC2P61916 151 aa11.95□□□□□ -0.5
NUP50-203ENST00000407019 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
NUP50-203ENST00000407019 TEN1Q86WV5 123 aa11.94□□□□□ -0.5
NUP50-203ENST00000407019 RNF183Q96D59 192 aa11.94□□□□□ -0.5
NUP50-203ENST00000407019 SMR3AQ99954 134 aa11.94□□□□□ -0.5
NUP50-203ENST00000407019 SPATA25Q9BR10 227 aa11.94□□□□□ -0.5
NUP50-203ENST00000407019 TRBV30A0A0K0K1B3 111 aa11.93□□□□□ -0.5
NUP50-203ENST00000407019 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
NUP50-203ENST00000407019 PF4P02776 101 aa11.93□□□□□ -0.5
NUP50-203ENST00000407019 CIRBPQ14011 172 aaKnown RBP11.93□□□□□ -0.5
NUP50-203ENST00000407019 Q9H8V8 135 aa11.93□□□□□ -0.5
NUP50-203ENST00000407019 KRTAP10-3P60369 221 aa11.92□□□□□ -0.5
NUP50-203ENST00000407019 H7C423 109 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 TRIAP1O43715 76 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 PPDPFLQ8WWR9 84 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 SIGMAR1Q99720 223 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 C9JAW5 83 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 SLC25A20O43772 301 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 DAND5Q8N907 189 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 ACANP16112 2415 aa11.91□□□□□ -0.5
NUP50-203ENST00000407019 F5H768 121 aa11.9□□□□□ -0.5
NUP50-203ENST00000407019 FHL2Q14192 279 aa11.9□□□□□ -0.5
NUP50-203ENST00000407019 LINC00482Q8N8I6 264 aa11.9□□□□□ -0.5
NUP50-203ENST00000407019 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
NUP50-203ENST00000407019 M0QXV9 152 aa11.9□□□□□ -0.51
NUP50-203ENST00000407019 ANKRD29Q8N6D5 301 aa11.9□□□□□ -0.51
NUP50-203ENST00000407019 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
NUP50-203ENST00000407019 SETXQ7Z333 2677 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms