RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TIMM21Q9BVV7 248 aa22.44■■□□□ 1.18
CSNK1E-204ENST00000403904 IBA57-AS1B1ANH7 110 aa22.43■■□□□ 1.18
CSNK1E-204ENST00000403904 CSDC2Q9Y534 153 aaKnown RBP22.43■■□□□ 1.18
CSNK1E-204ENST00000403904 A0A096LNJ9 63 aa22.42■■□□□ 1.18
CSNK1E-204ENST00000403904 CLPSL2Q6UWE3 100 aa22.42■■□□□ 1.18
CSNK1E-204ENST00000403904 SPANXA1Q9NS26 97 aa22.42■■□□□ 1.18
CSNK1E-204ENST00000403904 DNAH2Q9P225 4427 aa22.42■■□□□ 1.18
CSNK1E-204ENST00000403904 CDC42SE2Q9NRR3 84 aa22.42■■□□□ 1.18
CSNK1E-204ENST00000403904 NUPR1O60356 82 aa22.41■■□□□ 1.18
CSNK1E-204ENST00000403904 UBE2WQ96B02 151 aa22.41■■□□□ 1.18
CSNK1E-204ENST00000403904 OPRPNQ99935 248 aaPredicted RBP22.41■■□□□ 1.18
CSNK1E-204ENST00000403904 HSBP1O75506 76 aa22.4■■□□□ 1.18
CSNK1E-204ENST00000403904 HBDP02042 147 aa22.39■■□□□ 1.18
CSNK1E-204ENST00000403904 ZNF664Q8N3J9 261 aa22.39■■□□□ 1.18
CSNK1E-204ENST00000403904 FAM104AQ969W3 186 aa22.39■■□□□ 1.18
CSNK1E-204ENST00000403904 PYGO1Q9Y3Y4 419 aa22.39■■□□□ 1.18
CSNK1E-204ENST00000403904 RNASE13Q5GAN3 156 aaKnown RBP22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 ENHOQ6UWT2 76 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 Q6ZUT4 128 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 Q9HAA7 133 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 IGIPA6NJ69 53 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 REG3AQ06141 175 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 FAM19A2Q8N3H0 131 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 PRR34Q9NV39 138 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 DNAH10Q8IVF4 4471 aa22.38■■□□□ 1.17
CSNK1E-204ENST00000403904 CRPP02741 224 aa22.37■■□□□ 1.17
CSNK1E-204ENST00000403904 RYR3Q15413 4870 aa22.36■■□□□ 1.17
CSNK1E-204ENST00000403904 NDUFA6P56556 154 aa22.36■■□□□ 1.17
CSNK1E-204ENST00000403904 SCGB3A1Q96QR1 104 aa22.36■■□□□ 1.17
CSNK1E-204ENST00000403904 IGKV3OR2-268A0A0C4DH90 116 aa22.35■■□□□ 1.17
CSNK1E-204ENST00000403904 IGLV4-3A0A075B6K6 122 aa22.33■■□□□ 1.17
CSNK1E-204ENST00000403904 LINC01549A6NIU2 74 aa22.33■■□□□ 1.17
CSNK1E-204ENST00000403904 MRPS36P82909 103 aaKnown RBP22.33■■□□□ 1.17
CSNK1E-204ENST00000403904 ERASQ7Z444 233 aa22.33■■□□□ 1.17
CSNK1E-204ENST00000403904 TRAV8-3A0A0A6YYJ7 113 aa22.33■■□□□ 1.16
CSNK1E-204ENST00000403904 TIMM17AQ99595 171 aa22.33■■□□□ 1.16
CSNK1E-204ENST00000403904 TMEM141Q96I45 108 aa22.31■■□□□ 1.16
CSNK1E-204ENST00000403904 PDZD11Q5EBL8 140 aa22.3■■□□□ 1.16
CSNK1E-204ENST00000403904 COA6Q5JTJ3 125 aaKnown RBP22.3■■□□□ 1.16
CSNK1E-204ENST00000403904 C6orf223Q8N319 242 aa22.3■■□□□ 1.16
CSNK1E-204ENST00000403904 MIAQ16674 131 aa22.29■■□□□ 1.16
CSNK1E-204ENST00000403904 C1orf134Q5TEV5 83 aa22.29■■□□□ 1.16
CSNK1E-204ENST00000403904 IGLV10-54A0A075B6I4 117 aa22.27■■□□□ 1.16
CSNK1E-204ENST00000403904 NPSP0C0P6 89 aa22.27■■□□□ 1.16
CSNK1E-204ENST00000403904 ZC2HC1BQ5TFG8 222 aa22.27■■□□□ 1.16
CSNK1E-204ENST00000403904 Q6ZN92 141 aa22.26■■□□□ 1.15
CSNK1E-204ENST00000403904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP22.25■■□□□ 1.15
CSNK1E-204ENST00000403904 VCX2Q9H322 139 aa22.25■■□□□ 1.15
CSNK1E-204ENST00000403904 FRAS1Q86XX4 4008 aa22.25■■□□□ 1.15
CSNK1E-204ENST00000403904 IGKV2D-24A0A075B6R9 120 aa22.25■■□□□ 1.15
CSNK1E-204ENST00000403904 TEX43Q6ZNM6 134 aa22.25■■□□□ 1.15
CSNK1E-204ENST00000403904 NFE4Q86UQ8 179 aa22.25■■□□□ 1.15
CSNK1E-204ENST00000403904 TRAV13-1A0A0B4J241 112 aa22.24■■□□□ 1.15
CSNK1E-204ENST00000403904 LINC00959A0A1B0GUT2 108 aa22.24■■□□□ 1.15
CSNK1E-204ENST00000403904 C1orf43Q9BWL3 253 aa22.24■■□□□ 1.15
CSNK1E-204ENST00000403904 LINC00173Q6ZV60 143 aa22.23■■□□□ 1.15
CSNK1E-204ENST00000403904 AMELXQ99217 191 aa22.23■■□□□ 1.15
CSNK1E-204ENST00000403904 IFITM10A6NMD0 228 aa22.22■■□□□ 1.15
CSNK1E-204ENST00000403904 PAPPA-AS1Q5QFB9 102 aa22.22■■□□□ 1.15
CSNK1E-204ENST00000403904 TRAV8-4A0A0B4J246 113 aa22.21■■□□□ 1.15
CSNK1E-204ENST00000403904 ATP5LO75964 103 aa22.21■■□□□ 1.15
CSNK1E-204ENST00000403904 Q6ZRN7 208 aaPredicted RBP22.21■■□□□ 1.15
CSNK1E-204ENST00000403904 BAALCQ8WXS3 180 aa22.21■■□□□ 1.15
CSNK1E-204ENST00000403904 RMI2Q96E14 147 aa22.21■■□□□ 1.15
CSNK1E-204ENST00000403904 LEPROTL1O95214 131 aa22.2■■□□□ 1.14
CSNK1E-204ENST00000403904 FABP4P15090 132 aa22.2■■□□□ 1.14
CSNK1E-204ENST00000403904 SS18Q15532 418 aa22.18■■□□□ 1.14
CSNK1E-204ENST00000403904 CHCHD10Q8WYQ3 142 aaPredicted RBP22.18■■□□□ 1.14
CSNK1E-204ENST00000403904 C2orf88Q9BSF0 95 aa22.18■■□□□ 1.14
CSNK1E-204ENST00000403904 DNAH17Q9UFH2 4485 aa22.18■■□□□ 1.14
CSNK1E-204ENST00000403904 S100A6P06703 90 aa22.17■■□□□ 1.14
CSNK1E-204ENST00000403904 TM2D2Q9BX73 214 aa22.17■■□□□ 1.14
CSNK1E-204ENST00000403904 RTL8CO15255 209 aa22.16■■□□□ 1.14
CSNK1E-204ENST00000403904 IFI27L1Q96BM0 104 aa22.16■■□□□ 1.14
CSNK1E-204ENST00000403904 CCL25O15444 150 aa22.16■■□□□ 1.14
CSNK1E-204ENST00000403904 XCL1P47992 114 aa22.16■■□□□ 1.14
CSNK1E-204ENST00000403904 KRTAP26-1Q6PEX3 210 aa22.16■■□□□ 1.14
CSNK1E-204ENST00000403904 PSCAO43653 123 aa22.15■■□□□ 1.14
CSNK1E-204ENST00000403904 COX11Q9Y6N1 276 aa22.15■■□□□ 1.14
CSNK1E-204ENST00000403904 PRSS29PA6NIE9 313 aa22.14■■□□□ 1.13
CSNK1E-204ENST00000403904 PMVKQ15126 192 aa22.14■■□□□ 1.13
CSNK1E-204ENST00000403904 CST9LQ9H4G1 147 aa22.14■■□□□ 1.13
CSNK1E-204ENST00000403904 UBE2D1P51668 147 aa22.13■■□□□ 1.13
CSNK1E-204ENST00000403904 MAPKAPK5-AS1Q8N8E1 139 aa22.12■■□□□ 1.13
CSNK1E-204ENST00000403904 HSPB8Q9UJY1 196 aa22.12■■□□□ 1.13
CSNK1E-204ENST00000403904 GAGE12HA6NDE8 117 aa22.12■■□□□ 1.13
CSNK1E-204ENST00000403904 PRSS1P07477 247 aa22.12■■□□□ 1.13
CSNK1E-204ENST00000403904 SNRPEP62304 92 aaKnown RBP22.08■■□□□ 1.13
CSNK1E-204ENST00000403904 LINC00242Q5T6M2 205 aa22.08■■□□□ 1.13
CSNK1E-204ENST00000403904 CD164L2Q6UWJ8 174 aa22.08■■□□□ 1.12
CSNK1E-204ENST00000403904 FAT2Q9NYQ8 4349 aa22.07■■□□□ 1.12
CSNK1E-204ENST00000403904 FOXI1Q12951 378 aa22.07■■□□□ 1.12
CSNK1E-204ENST00000403904 HIST3H2BBQ8N257 126 aa22.07■■□□□ 1.12
CSNK1E-204ENST00000403904 TMA7Q9Y2S6 64 aaKnown RBP22.07■■□□□ 1.12
CSNK1E-204ENST00000403904 A0A0J9YXV3 536 aa22.05■■□□□ 1.12
CSNK1E-204ENST00000403904 H0Y8G0 127 aa22.05■■□□□ 1.12
CSNK1E-204ENST00000403904 COX6A2Q02221 97 aa22.04■■□□□ 1.12
CSNK1E-204ENST00000403904 TNP2Q05952 138 aa22.03■■□□□ 1.12
CSNK1E-204ENST00000403904 FAM19A3Q7Z5A8 133 aa22.03■■□□□ 1.12
CSNK1E-204ENST00000403904 PACRGQ96M98 296 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms