RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SFTA2Q6UW10 78 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 UBE2DNLQ8IWF7 75 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 DOCK1Q14185 1865 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 MYOM1P52179 1685 aa0.75□□□□□ -2.29
HMGB1P17-201ENST00000403495 ZNF609O15014 1411 aa0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 COL5A1-AS1Q5SY13 56 aa0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 PMCHL2Q9BQD1 86 aa0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 DPY30Q9C005 99 aa0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 NXT2Q9NPJ8 142 aaKnown RBP0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 ARL2-SNX15V9GYD0 113 aa0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 TOPAZ1Q8N9V7 1692 aa0.74□□□□□ -2.29
HMGB1P17-201ENST00000403495 TEX14Q8IWB6 1497 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 FYCO1Q9BQS8 1478 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 TANC1Q9C0D5 1861 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 TET3O43151 1660 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 UBA52P62987 128 aaKnown RBP0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 FAM223AQ8IWN6 122 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 FAIMQ9NVQ4 179 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 TOP2BQ02880 1626 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 CHD8Q9HCK8 2581 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 EHBP1L1Q8N3D4 1523 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 GAPVD1Q14C86 1478 aa0.73□□□□□ -2.29
HMGB1P17-201ENST00000403495 KDM5AP29375 1690 aaKnown RBP0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 ARHGEF5Q12774 1597 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 DIP2CQ9Y2E4 1556 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 NDUFC1O43677 76 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 MGPP08493 103 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 IGLC1P0CG04 106 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 HAMPP81172 84 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 SNHG12Q9BXW3 62 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 HMGXB3Q12766 1538 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 MYH9P35579 1960 aaKnown RBP0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 KIF21AQ7Z4S6 1674 aa0.72□□□□□ -2.29
HMGB1P17-201ENST00000403495 ANKRD36BQ8N2N9 1353 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 SMARCA2P51531 1590 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 NCOR2Q9Y618 2525 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 PTPN13Q12923 2485 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 PRDM15P57071 1507 aaPredicted RBP0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 ATOX1O00244 68 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 VAMP8Q9BV40 100 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 LINC00472Q9H8W2 130 aa0.71□□□□□ -2.3
HMGB1P17-201ENST00000403495 UNC13BO14795 1591 aa0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 TEP1Q99973 2627 aaKnown RBP0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 ZNF815PA8K554 130 aa0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 M0R3E3 92 aa0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 COX6A2Q02221 97 aa0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 SSBP3-AS1Q7Z2R9 100 aa0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 SETXQ7Z333 2677 aaKnown RBP0.7□□□□□ -2.3
HMGB1P17-201ENST00000403495 NINQ8N4C6 2090 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 USP9XQ93008 2570 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 DOCK2Q92608 1830 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 COL6A3P12111 3177 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 A0A0G2JND7 137 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 A0A1B0GWA3 101 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 FAM223BA6NKX1 122 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 SAA2P0DJI9 122 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 Q6JHZ5 121 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 CACFD1Q9UGQ2 172 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 LRRC37A2A6NM11 1700 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 CHD1O14646 1710 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 ABCA3Q99758 1704 aa0.69□□□□□ -2.3
HMGB1P17-201ENST00000403495 ESPL1Q14674 2120 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 MAGI1Q96QZ7 1491 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 MLH3Q9UHC1 1453 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 SPAG17Q6Q759 2223 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 ZNF462Q96JM2 2506 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 ASH1LQ9NR48 2969 aaKnown RBP0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 NSD3Q9BZ95 1437 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 PLAC8Q9NZF1 115 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 ABCA2Q9BZC7 2435 aa0.68□□□□□ -2.3
HMGB1P17-201ENST00000403495 MEGF8Q7Z7M0 2845 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 SPTBP11277 2137 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 ZDBF2Q9HCK1 2354 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 C10orf142B7Z368 130 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 S100A3P33764 101 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 SERP2Q8N6R1 65 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 SPRR4Q96PI1 79 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 TRGV9Q99603 122 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 Q9H521 79 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 MYH8P13535 1937 aa0.67□□□□□ -2.3
HMGB1P17-201ENST00000403495 UQCRHP07919 91 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 FAUP35544 74 aaKnown RBP0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 PMCHL1Q16048 86 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 TMEM263Q8WUH6 116 aaKnown RBP0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 LRP6O75581 1613 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 RAPGEF6Q8TEU7 1601 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 ADGRL2O95490 1459 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 PLEKHH2Q8IVE3 1493 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 ZNF236Q9UL36 1845 aa0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 ANKHD1Q8IWZ3 2542 aaKnown RBP0.66□□□□□ -2.3
HMGB1P17-201ENST00000403495 TROQ12816 1431 aaPredicted RBP0.65□□□□□ -2.3
HMGB1P17-201ENST00000403495 JMJD1CQ15652 2540 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 LRRK2Q5S007 2527 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 UBR4Q5T4S7 5183 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 TRBV25-1A0A075B6N4 114 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 A0A0D9SFI3 127 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 H7BZZ5 65 aa0.65□□□□□ -2.31
HMGB1P17-201ENST00000403495 ASIPP42127 132 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms