RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 Q9HAA7 133 aa12.54□□□□□ -0.4
PTPRA-205ENST00000399903 hADV29S1A0JD25 119 aa12.53□□□□□ -0.4
PTPRA-205ENST00000399903 KRTAP10-9P60411 292 aa12.53□□□□□ -0.4
PTPRA-205ENST00000399903 C10orf99Q6UWK7 81 aa12.53□□□□□ -0.4
PTPRA-205ENST00000399903 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
PTPRA-205ENST00000399903 HIST2H2BDQ6DRA6 164 aa12.53□□□□□ -0.4
PTPRA-205ENST00000399903 DGAT2L7PQ6IED9 249 aa12.53□□□□□ -0.4
PTPRA-205ENST00000399903 BAALC-AS2P0C853 105 aa12.52□□□□□ -0.4
PTPRA-205ENST00000399903 APCP25054 2843 aa12.52□□□□□ -0.4
PTPRA-205ENST00000399903 IGHV3-16A0A0C4DH30 117 aa12.52□□□□□ -0.41
PTPRA-205ENST00000399903 MSMBP08118 114 aa12.52□□□□□ -0.41
PTPRA-205ENST00000399903 FAM240AA0A1B0GVK7 77 aa12.52□□□□□ -0.41
PTPRA-205ENST00000399903 NDUFA4O00483 81 aa12.52□□□□□ -0.41
PTPRA-205ENST00000399903 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
PTPRA-205ENST00000399903 VSIG2Q96IQ7 327 aa12.52□□□□□ -0.41
PTPRA-205ENST00000399903 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
PTPRA-205ENST00000399903 IGKV3D-7A0A0C4DH55 119 aa12.51□□□□□ -0.41
PTPRA-205ENST00000399903 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
PTPRA-205ENST00000399903 CDKN2A-AS1Q9UH64 79 aa12.51□□□□□ -0.41
PTPRA-205ENST00000399903 UQCRQO14949 82 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 CIRBPQ14011 172 aaKnown RBP12.5□□□□□ -0.41
PTPRA-205ENST00000399903 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 KLLNB2CW77 178 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 Q8N2B8 174 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 Q9H8V8 135 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 UBR5O95071 2799 aaPredicted RBP12.5□□□□□ -0.41
PTPRA-205ENST00000399903 A0A0J9YX75 114 aa12.5□□□□□ -0.41
PTPRA-205ENST00000399903 LINC00643Q86TS7 51 aa12.49□□□□□ -0.41
PTPRA-205ENST00000399903 IGHV1OR15-1A0A075B7D0 117 aa12.49□□□□□ -0.41
PTPRA-205ENST00000399903 IGHV4-59P01825 116 aa12.49□□□□□ -0.41
PTPRA-205ENST00000399903 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
PTPRA-205ENST00000399903 FAM19A4Q96LR4 140 aa12.49□□□□□ -0.41
PTPRA-205ENST00000399903 FLNAP21333 2647 aaKnown RBP12.48□□□□□ -0.41
PTPRA-205ENST00000399903 FAM223BA6NKX1 122 aa12.48□□□□□ -0.41
PTPRA-205ENST00000399903 FAM223AQ8IWN6 122 aa12.48□□□□□ -0.41
PTPRA-205ENST00000399903 CITED2Q99967 270 aaPredicted RBP12.48□□□□□ -0.41
PTPRA-205ENST00000399903 SPANXDQ9BXN6 97 aa12.48□□□□□ -0.41
PTPRA-205ENST00000399903 SPANXCQ9NY87 97 aa12.48□□□□□ -0.41
PTPRA-205ENST00000399903 J3KT08 172 aa12.47□□□□□ -0.41
PTPRA-205ENST00000399903 MRPS36P82909 103 aaKnown RBP12.47□□□□□ -0.41
PTPRA-205ENST00000399903 HELZ2Q9BYK8 2649 aaKnown RBP12.47□□□□□ -0.41
PTPRA-205ENST00000399903 ITPR3Q14573 2671 aa12.46□□□□□ -0.41
PTPRA-205ENST00000399903 TIRAPP58753 221 aa12.46□□□□□ -0.41
PTPRA-205ENST00000399903 DEFB112Q30KQ8 113 aa12.45□□□□□ -0.42
PTPRA-205ENST00000399903 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
PTPRA-205ENST00000399903 ACYP1P07311 99 aa12.45□□□□□ -0.42
PTPRA-205ENST00000399903 SMIM9A6NGZ8 99 aa12.45□□□□□ -0.42
PTPRA-205ENST00000399903 LINC00308Q8TCZ7 52 aa12.45□□□□□ -0.42
PTPRA-205ENST00000399903 TENM4Q6N022 2769 aa12.45□□□□□ -0.42
PTPRA-205ENST00000399903 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 COX7A2LO14548 114 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 KIR2DL5BQ8NHK3 375 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 LINC00467Q9BRT7 94 aa12.44□□□□□ -0.42
PTPRA-205ENST00000399903 A0A087WVE0 104 aa12.43□□□□□ -0.42
PTPRA-205ENST00000399903 A0A1B0GX51 115 aa12.43□□□□□ -0.42
PTPRA-205ENST00000399903 B4DSR2 109 aa12.43□□□□□ -0.42
PTPRA-205ENST00000399903 C5orf47Q569G3 176 aa12.43□□□□□ -0.42
PTPRA-205ENST00000399903 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
PTPRA-205ENST00000399903 DNAL4O96015 105 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 COX7CP15954 63 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 APRG1Q8IVJ8 170 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 SNRPD3P62318 126 aaKnown RBP12.42□□□□□ -0.42
PTPRA-205ENST00000399903 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 ZNF843Q8N446 348 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 IMUPQ9GZP8 106 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 CYSTM1Q9H1C7 97 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 A6NDX4 124 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 FAM218AQ96MZ4 157 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 PEMTQ9UBM1 199 aa12.42□□□□□ -0.42
PTPRA-205ENST00000399903 DSCR8Q96T75 97 aa12.41□□□□□ -0.42
PTPRA-205ENST00000399903 C14orf132Q9NPU4 83 aa12.41□□□□□ -0.42
PTPRA-205ENST00000399903 NIPBLQ6KC79 2804 aaeCLIP12.41□□□□□ -0.42
PTPRA-205ENST00000399903 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 TRACP01848 142 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 IGHG2P01859 326 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 COX6A2Q02221 97 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 FAM104AQ969W3 186 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.4□□□□□ -0.42
PTPRA-205ENST00000399903 Q6ZSN1 163 aa12.4□□□□□ -0.42
PTPRA-205ENST00000399903 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
PTPRA-205ENST00000399903 SOSTDC1Q6X4U4 206 aa12.39□□□□□ -0.43
PTPRA-205ENST00000399903 LINC01600Q96MT4 127 aa12.39□□□□□ -0.43
PTPRA-205ENST00000399903 HIST1H4AP62805 103 aaKnown RBP12.39□□□□□ -0.43
PTPRA-205ENST00000399903 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
PTPRA-205ENST00000399903 C19orf54Q5BKX5 351 aa12.38□□□□□ -0.43
PTPRA-205ENST00000399903 TOMM7Q9P0U1 55 aa12.38□□□□□ -0.43
PTPRA-205ENST00000399903 OR13C6PQ8NH95 151 aa12.38□□□□□ -0.43
PTPRA-205ENST00000399903 UBE2D4Q9Y2X8 147 aa12.38□□□□□ -0.43
PTPRA-205ENST00000399903 ATP5G1P05496 136 aa12.37□□□□□ -0.43
PTPRA-205ENST00000399903 RNF152Q8N8N0 203 aa12.37□□□□□ -0.43
PTPRA-205ENST00000399903 PYGO1Q9Y3Y4 419 aa12.37□□□□□ -0.43
PTPRA-205ENST00000399903 USMG5Q96IX5 58 aa12.36□□□□□ -0.43
PTPRA-205ENST00000399903 IGHV3OR16-12A0A075B7B8 117 aa12.36□□□□□ -0.43
PTPRA-205ENST00000399903 NDUFA1O15239 70 aa12.35□□□□□ -0.43
PTPRA-205ENST00000399903 FASNP49327 2511 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms