RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CBLN2Q8IUK8 224 aa11.76□□□□□ -0.53
CTNS-203ENST00000399306 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
CTNS-203ENST00000399306 SPANXA1Q9NS26 97 aa11.76□□□□□ -0.53
CTNS-203ENST00000399306 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
CTNS-203ENST00000399306 A0A087WTM6 91 aa11.75□□□□□ -0.53
CTNS-203ENST00000399306 LOC389332A0A1B0GUA5 103 aa11.75□□□□□ -0.53
CTNS-203ENST00000399306 LRCOL1A6NCL2 159 aa11.75□□□□□ -0.53
CTNS-203ENST00000399306 DGAT2L7PQ6IED9 249 aa11.75□□□□□ -0.53
CTNS-203ENST00000399306 LINC01546A6NGU7 62 aa11.74□□□□□ -0.53
CTNS-203ENST00000399306 PYGO1Q9Y3Y4 419 aa11.74□□□□□ -0.53
CTNS-203ENST00000399306 LINC01549A6NIU2 74 aa11.73□□□□□ -0.53
CTNS-203ENST00000399306 CCL25O15444 150 aa11.73□□□□□ -0.53
CTNS-203ENST00000399306 NPSP0C0P6 89 aa11.73□□□□□ -0.53
CTNS-203ENST00000399306 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
CTNS-203ENST00000399306 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
CTNS-203ENST00000399306 IFI27P40305 119 aaPredicted RBP11.72□□□□□ -0.53
CTNS-203ENST00000399306 MRPS36P82909 103 aaKnown RBP11.72□□□□□ -0.53
CTNS-203ENST00000399306 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
CTNS-203ENST00000399306 PRSS3P2Q8NHM4 247 aa11.72□□□□□ -0.53
CTNS-203ENST00000399306 CDPF1Q6NVV7 123 aa11.71□□□□□ -0.53
CTNS-203ENST00000399306 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
CTNS-203ENST00000399306 CYSLTR1Q9Y271 337 aa11.71□□□□□ -0.53
CTNS-203ENST00000399306 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
CTNS-203ENST00000399306 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
CTNS-203ENST00000399306 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
CTNS-203ENST00000399306 NTN5Q8WTR8 489 aaPredicted RBP11.7□□□□□ -0.54
CTNS-203ENST00000399306 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
CTNS-203ENST00000399306 BIRC6Q9NR09 4857 aa11.69□□□□□ -0.54
CTNS-203ENST00000399306 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
CTNS-203ENST00000399306 C2orf66Q6UXQ4 117 aa11.68□□□□□ -0.54
CTNS-203ENST00000399306 Q8N814 137 aa11.68□□□□□ -0.54
CTNS-203ENST00000399306 C18orf32Q8TCD1 76 aa11.68□□□□□ -0.54
CTNS-203ENST00000399306 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
CTNS-203ENST00000399306 COLCA2A8K830 154 aa11.67□□□□□ -0.54
CTNS-203ENST00000399306 RAB5BP61020 215 aa11.67□□□□□ -0.54
CTNS-203ENST00000399306 SS18Q15532 418 aa11.67□□□□□ -0.54
CTNS-203ENST00000399306 FA2HQ7L5A8 372 aa11.67□□□□□ -0.54
CTNS-203ENST00000399306 SPATA12Q7Z6I5 190 aa11.67□□□□□ -0.54
CTNS-203ENST00000399306 DNAH5Q8TE73 4624 aa11.66□□□□□ -0.54
CTNS-203ENST00000399306 C1orf196B1AJZ1 125 aa11.66□□□□□ -0.54
CTNS-203ENST00000399306 S100A1P23297 94 aa11.66□□□□□ -0.54
CTNS-203ENST00000399306 Q6ZUT4 128 aa11.66□□□□□ -0.54
CTNS-203ENST00000399306 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
CTNS-203ENST00000399306 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
CTNS-203ENST00000399306 PAPPA-AS1Q5QFB9 102 aa11.65□□□□□ -0.54
CTNS-203ENST00000399306 BAALCQ8WXS3 180 aa11.65□□□□□ -0.54
CTNS-203ENST00000399306 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
CTNS-203ENST00000399306 FAM104AQ969W3 186 aa11.65□□□□□ -0.54
CTNS-203ENST00000399306 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
CTNS-203ENST00000399306 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.54
CTNS-203ENST00000399306 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
CTNS-203ENST00000399306 TMEM141Q96I45 108 aa11.64□□□□□ -0.55
CTNS-203ENST00000399306 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
CTNS-203ENST00000399306 IGKV3OR2-268A0A0C4DH90 116 aa11.63□□□□□ -0.55
CTNS-203ENST00000399306 LINC00614P0C842 121 aa11.63□□□□□ -0.55
CTNS-203ENST00000399306 KRTAP10-2P60368 255 aa11.63□□□□□ -0.55
CTNS-203ENST00000399306 WFDC2Q14508 124 aa11.63□□□□□ -0.55
CTNS-203ENST00000399306 CD164L2Q6UWJ8 174 aa11.63□□□□□ -0.55
CTNS-203ENST00000399306 GAGE12HA6NDE8 117 aa11.62□□□□□ -0.55
CTNS-203ENST00000399306 CFAP161Q6P656 301 aa11.62□□□□□ -0.55
CTNS-203ENST00000399306 Q6ZN92 141 aa11.62□□□□□ -0.55
CTNS-203ENST00000399306 ERASQ7Z444 233 aa11.62□□□□□ -0.55
CTNS-203ENST00000399306 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
CTNS-203ENST00000399306 TRGC2P03986 189 aa11.61□□□□□ -0.55
CTNS-203ENST00000399306 FOXI1Q12951 378 aa11.61□□□□□ -0.55
CTNS-203ENST00000399306 AMELXQ99217 191 aa11.61□□□□□ -0.55
CTNS-203ENST00000399306 LRP1BQ9NZR2 4599 aa11.6□□□□□ -0.55
CTNS-203ENST00000399306 C16orf90A8MZG2 172 aa11.6□□□□□ -0.55
CTNS-203ENST00000399306 TEX43Q6ZNM6 134 aa11.6□□□□□ -0.55
CTNS-203ENST00000399306 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
CTNS-203ENST00000399306 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
CTNS-203ENST00000399306 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
CTNS-203ENST00000399306 IFITM10A6NMD0 228 aa11.59□□□□□ -0.55
CTNS-203ENST00000399306 LECT2O14960 151 aa11.59□□□□□ -0.55
CTNS-203ENST00000399306 XCL1P47992 114 aa11.59□□□□□ -0.55
CTNS-203ENST00000399306 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
CTNS-203ENST00000399306 C2orf88Q9BSF0 95 aa11.59□□□□□ -0.55
CTNS-203ENST00000399306 VCX2Q9H322 139 aa11.59□□□□□ -0.55
CTNS-203ENST00000399306 RNASE13Q5GAN3 156 aaKnown RBP11.58□□□□□ -0.56
CTNS-203ENST00000399306 SCGB3A1Q96QR1 104 aa11.58□□□□□ -0.56
CTNS-203ENST00000399306 IGLV5-52A0A0A0MRZ9 124 aa11.57□□□□□ -0.56
CTNS-203ENST00000399306 ATP6V1G1O75348 118 aa11.57□□□□□ -0.56
CTNS-203ENST00000399306 SCO1O75880 301 aa11.57□□□□□ -0.56
CTNS-203ENST00000399306 FAM19A3Q7Z5A8 133 aa11.57□□□□□ -0.56
CTNS-203ENST00000399306 IGHV1-58A0A0C4DH39 117 aa11.56□□□□□ -0.56
CTNS-203ENST00000399306 HBDP02042 147 aa11.56□□□□□ -0.56
CTNS-203ENST00000399306 A0A096LNJ9 63 aa11.55□□□□□ -0.56
CTNS-203ENST00000399306 PRSS1P07477 247 aa11.55□□□□□ -0.56
CTNS-203ENST00000399306 UBE2D1P51668 147 aa11.55□□□□□ -0.56
CTNS-203ENST00000399306 SEC11AP67812 179 aa11.55□□□□□ -0.56
CTNS-203ENST00000399306 LINC00173Q6ZV60 143 aa11.55□□□□□ -0.56
CTNS-203ENST00000399306 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
CTNS-203ENST00000399306 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
CTNS-203ENST00000399306 IGHV3OR16-9A0A0B4J2B5 98 aa11.54□□□□□ -0.56
CTNS-203ENST00000399306 COX7A2LO14548 114 aa11.54□□□□□ -0.56
CTNS-203ENST00000399306 GCSHP23434 173 aa11.54□□□□□ -0.56
CTNS-203ENST00000399306 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
CTNS-203ENST00000399306 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
CTNS-203ENST00000399306 PDZD11Q5EBL8 140 aa11.53□□□□□ -0.56
CTNS-203ENST00000399306 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms