RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 LINC00526Q96FQ7 95 aa8.65□□□□□ -1.03
HLCS-202ENST00000399120 SMIM11BQ8TCY0 68 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 ODF3BA8MYP8 253 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 ZSWIM8A7E2V4 1837 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 LY6G6CO95867 125 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 IGF1P05019 195 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 PROK1P58294 105 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 ESRGQ1W209 222 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 EBI3Q14213 229 aa8.64□□□□□ -1.03
HLCS-202ENST00000399120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.64□□□□□ -1.03
HLCS-202ENST00000399120 MRPS36P82909 103 aaKnown RBP8.63□□□□□ -1.03
HLCS-202ENST00000399120 SHANK1Q9Y566 2161 aa8.63□□□□□ -1.03
HLCS-202ENST00000399120 TRBV7-6A0A0J9YX20 115 aa8.63□□□□□ -1.03
HLCS-202ENST00000399120 INAFM1C9JVW0 142 aa8.63□□□□□ -1.03
HLCS-202ENST00000399120 KPRPQ5T749 579 aaPredicted RBP8.63□□□□□ -1.03
HLCS-202ENST00000399120 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
HLCS-202ENST00000399120 CELA1Q9UNI1 258 aa8.63□□□□□ -1.03
HLCS-202ENST00000399120 ZNF73O43830 326 aaPredicted RBP8.62□□□□□ -1.03
HLCS-202ENST00000399120 LELP1Q5T871 98 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 NLRC5Q86WI3 1866 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 A8MZ25 164 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 CCDC179H3BU77 68 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 LST1O00453 97 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 Q6Q795 121 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 PLXNA2O75051 1894 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 COX17Q14061 63 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 POM121L12Q8N7R1 296 aa8.62□□□□□ -1.03
HLCS-202ENST00000399120 FBXL19-AS1Q494R0 122 aa8.61□□□□□ -1.03
HLCS-202ENST00000399120 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
HLCS-202ENST00000399120 Q6JHZ5 121 aa8.61□□□□□ -1.03
HLCS-202ENST00000399120 LMO4P61968 165 aa8.61□□□□□ -1.03
HLCS-202ENST00000399120 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
HLCS-202ENST00000399120 SIP14410 1827 aa8.6□□□□□ -1.03
HLCS-202ENST00000399120 THSD7BQ9C0I4 1608 aa8.6□□□□□ -1.03
HLCS-202ENST00000399120 CLUHP3Q96NS8 147 aa8.6□□□□□ -1.03
HLCS-202ENST00000399120 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
HLCS-202ENST00000399120 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
HLCS-202ENST00000399120 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 U3KQK5 164 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 TRAV7A0A075B6U4 112 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
HLCS-202ENST00000399120 C11orf1Q9H5F2 150 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 OBSL1O75147 1896 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 TSHBP01222 138 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.03
HLCS-202ENST00000399120 LINC00694P0DN24 101 aa8.58□□□□□ -1.04
HLCS-202ENST00000399120 MBD6Q96DN6 1003 aa8.58□□□□□ -1.04
HLCS-202ENST00000399120 Q6ZSV7 163 aa8.58□□□□□ -1.04
HLCS-202ENST00000399120 NANOS2P60321 138 aaKnown RBP8.57□□□□□ -1.04
HLCS-202ENST00000399120 MSMPQ1L6U9 139 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 MUC7Q8TAX7 377 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 PCNX1Q96RV3 2341 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 CREBBPQ92793 2442 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 CACNA1HO95180 2353 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
HLCS-202ENST00000399120 M0QXV9 152 aa8.56□□□□□ -1.04
HLCS-202ENST00000399120 P0C879 139 aa8.56□□□□□ -1.04
HLCS-202ENST00000399120 CRIP1P50238 77 aa8.56□□□□□ -1.04
HLCS-202ENST00000399120 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
HLCS-202ENST00000399120 SPINK1P00995 79 aa8.56□□□□□ -1.04
HLCS-202ENST00000399120 Q8IZM0 81 aa8.56□□□□□ -1.04
HLCS-202ENST00000399120 ZNF843Q8N446 348 aa8.55□□□□□ -1.04
HLCS-202ENST00000399120 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
HLCS-202ENST00000399120 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
HLCS-202ENST00000399120 LTBP1Q14766 1721 aa8.55□□□□□ -1.04
HLCS-202ENST00000399120 ARHGAP21Q5T5U3 1957 aa8.55□□□□□ -1.04
HLCS-202ENST00000399120 LINC00574Q9H8X3 128 aa8.55□□□□□ -1.04
HLCS-202ENST00000399120 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
HLCS-202ENST00000399120 CYSRT1A8MQ03 144 aa8.53□□□□□ -1.04
HLCS-202ENST00000399120 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
HLCS-202ENST00000399120 DENND4AQ7Z401 1863 aa8.53□□□□□ -1.04
HLCS-202ENST00000399120 XGP55808 180 aa8.53□□□□□ -1.04
HLCS-202ENST00000399120 LINC01547P58512 204 aaPredicted RBP8.53□□□□□ -1.04
HLCS-202ENST00000399120 C19orf84I3L1E1 186 aa8.53□□□□□ -1.04
HLCS-202ENST00000399120 NRACQ8N912 160 aa8.53□□□□□ -1.04
HLCS-202ENST00000399120 TRBV7-7A0A0K0K1E9 115 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 BEAN1Q3B7T3 259 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 Q8NA96 180 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 PLA2G5P39877 138 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 FRMPD3Q5JV73 1810 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 RNASE3P12724 160 aaKnown RBP8.52□□□□□ -1.05
HLCS-202ENST00000399120 MRGPRG-AS1Q2M3A8 158 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
HLCS-202ENST00000399120 Q6ZS46 218 aa8.51□□□□□ -1.05
HLCS-202ENST00000399120 PSPHP1O15172 72 aa8.51□□□□□ -1.05
HLCS-202ENST00000399120 NBASA2RRP1 2371 aa8.51□□□□□ -1.05
HLCS-202ENST00000399120 LY6G6DO95868 133 aa8.5□□□□□ -1.05
HLCS-202ENST00000399120 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
HLCS-202ENST00000399120 RIF1Q5UIP0 2472 aaKnown RBP8.5□□□□□ -1.05
HLCS-202ENST00000399120 Q8N814 137 aa8.5□□□□□ -1.05
HLCS-202ENST00000399120 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
HLCS-202ENST00000399120 H0Y9P7 68 aa8.49□□□□□ -1.05
HLCS-202ENST00000399120 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
HLCS-202ENST00000399120 PRORYQ9H606 182 aa8.49□□□□□ -1.05
HLCS-202ENST00000399120 ZNF702PQ9H963 129 aa8.49□□□□□ -1.05
HLCS-202ENST00000399120 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
HLCS-202ENST00000399120 BRWD1-AS2P59051 145 aa8.49□□□□□ -1.05
HLCS-202ENST00000399120 EGFEM1PQ0D2K5 195 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms