RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 Q6Q795 121 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 IGHG2P01859 326 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 MRPS36P82909 103 aaKnown RBP7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
PTCHD4-202ENST00000398738 IGHV4-61A0A0C4DH41 118 aa7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 RBMY1A1P0DJD3 496 aaKnown RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 RBMY1CP0DJD4 496 aa7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 DAZ2Q13117 558 aaKnown RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 RBMY1FQ15415 496 aaKnown RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 DAZ4Q86SG3 579 aaKnown RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 DAZ3Q9NR90 486 aaKnown RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 M0QXV9 152 aa7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 LINC00694P0DN24 101 aa7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 COX6A2Q02221 97 aa7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 CIRBPQ14011 172 aaKnown RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 SMCR5Q8TEV8 140 aa7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 CITED2Q99967 270 aaPredicted RBP7.19□□□□□ -1.26
PTCHD4-202ENST00000398738 K7ENP7 123 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 BRI3O95415 125 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 FBXL19-AS1Q494R0 122 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 C19orf54Q5BKX5 351 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 ITPR1Q14643 2758 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 IGHV3-53P01767 116 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 DEFB131AP59861 70 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 PIK3CD-AS1Q5SR53 167 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 EDA2RQ9HAV5 297 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 CFHR3Q02985 330 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 PRIMA1Q86XR5 153 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 YAE1D1Q9NRH1 226 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 FAM208BQ5VWN6 2430 aa7.18□□□□□ -1.26
PTCHD4-202ENST00000398738 DEFB136Q30KP8 78 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 SPANXDQ9BXN6 97 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 SPANXCQ9NY87 97 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 KLK9Q2XQG4 91 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 LINC00308Q8TCZ7 52 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 LINC01587Q99440 93 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 PRORYQ9H606 182 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 ACACBO00763 2458 aa7.17□□□□□ -1.26
PTCHD4-202ENST00000398738 C11orf44Q8N8P7 122 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 TOMM7Q9P0U1 55 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 UBE2D4Q9Y2X8 147 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 TINCRA0A1B0GVN0 87 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 MAPK1IP1LQ8NDC0 245 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 CHCHD7Q9BUK0 85 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 VPREB3Q9UKI3 123 aa7.16□□□□□ -1.26
PTCHD4-202ENST00000398738 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.26
PTCHD4-202ENST00000398738 IGHV4-59P01825 116 aa7.15□□□□□ -1.26
PTCHD4-202ENST00000398738 SOSTDC1Q6X4U4 206 aa7.15□□□□□ -1.26
PTCHD4-202ENST00000398738 K7EQG2 157 aa7.15□□□□□ -1.27
PTCHD4-202ENST00000398738 LY6DQ14210 128 aa7.15□□□□□ -1.27
PTCHD4-202ENST00000398738 SDIM1Q6ZPB5 146 aa7.15□□□□□ -1.27
PTCHD4-202ENST00000398738 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.27
PTCHD4-202ENST00000398738 FN1P02751 2386 aaKnown RBP7.15□□□□□ -1.27
PTCHD4-202ENST00000398738 C19orf84I3L1E1 186 aa7.14□□□□□ -1.27
PTCHD4-202ENST00000398738 TIRAPP58753 221 aa7.14□□□□□ -1.27
PTCHD4-202ENST00000398738 PYGO1Q9Y3Y4 419 aa7.14□□□□□ -1.27
PTCHD4-202ENST00000398738 A6NDX4 124 aa7.14□□□□□ -1.27
PTCHD4-202ENST00000398738 HERVK_113P63121 156 aa7.14□□□□□ -1.27
PTCHD4-202ENST00000398738 UBE2E2Q96LR5 201 aa7.14□□□□□ -1.27
PTCHD4-202ENST00000398738 COX7A2LO14548 114 aa7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 ATP5G1P05496 136 aa7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 UCNP55089 124 aa7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 XCL2Q9UBD3 114 aa7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 EPG5Q9HCE0 2579 aa7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 NAV2Q8IVL1 2488 aa7.13□□□□□ -1.27
PTCHD4-202ENST00000398738 TRBV7-7A0A0K0K1E9 115 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 FAM240AA0A1B0GVK7 77 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 C18orf65Q6ZTR6 163 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 SPANXA1Q9NS26 97 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 FBN2P35556 2912 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 hADV29S1A0JD25 119 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 K7EMT4 169 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 LINC00643Q86TS7 51 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 C3orf22Q8N5N4 141 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 PIMREGQ9BSJ6 248 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 C11orf68Q9H3H3 251 aaKnown RBP7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
PTCHD4-202ENST00000398738 MYO18BQ8IUG5 2567 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 IGHV4-30-2A0A087WSY4 118 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 A0A087WVE0 104 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 NDUFA1O15239 70 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 SLURP1P55000 103 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 TMEM126AQ9H061 195 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 CCDC168Q8NDH2 2452 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 ATP5J2P56134 94 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 NRGNQ92686 78 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 CHD6Q8TD26 2715 aa7.11□□□□□ -1.27
PTCHD4-202ENST00000398738 TRGV1A0A0A0MS02 117 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 C9orf129Q5T035 196 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 H3BUA1 57 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 DNAL4O96015 105 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 SLPIP03973 132 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 OR13C6PQ8NH95 151 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 FLNCQ14315 2725 aa7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 RBMY1BA6NDE4 496 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-202ENST00000398738 RBMY1EA6NEQ0 496 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms