RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 PRELID3AQ96N28 172 aa12.35□□□□□ -0.43
COLCA2-201ENST00000398035 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
COLCA2-201ENST00000398035 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
COLCA2-201ENST00000398035 RAB5AP20339 215 aa12.33□□□□□ -0.44
COLCA2-201ENST00000398035 CFAP161Q6P656 301 aa12.33□□□□□ -0.44
COLCA2-201ENST00000398035 ZNF664Q8N3J9 261 aa12.33□□□□□ -0.44
COLCA2-201ENST00000398035 CDC42SE2Q9NRR3 84 aa12.33□□□□□ -0.44
COLCA2-201ENST00000398035 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
COLCA2-201ENST00000398035 IGKV3OR2-268A0A0C4DH90 116 aa12.32□□□□□ -0.44
COLCA2-201ENST00000398035 PRSS47A8MTI9 375 aa12.32□□□□□ -0.44
COLCA2-201ENST00000398035 NPYP01303 97 aa12.32□□□□□ -0.44
COLCA2-201ENST00000398035 RHEBQ15382 184 aa12.32□□□□□ -0.44
COLCA2-201ENST00000398035 CCL25O15444 150 aa12.31□□□□□ -0.44
COLCA2-201ENST00000398035 TIMM21Q9BVV7 248 aa12.31□□□□□ -0.44
COLCA2-201ENST00000398035 HERC2O95714 4834 aa12.3□□□□□ -0.44
COLCA2-201ENST00000398035 SS18Q15532 418 aa12.3□□□□□ -0.44
COLCA2-201ENST00000398035 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
COLCA2-201ENST00000398035 LRP1BQ9NZR2 4599 aa12.3□□□□□ -0.44
COLCA2-201ENST00000398035 COX19Q49B96 90 aa12.29□□□□□ -0.44
COLCA2-201ENST00000398035 MAP1LC3AQ9H492 121 aa12.29□□□□□ -0.44
COLCA2-201ENST00000398035 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
COLCA2-201ENST00000398035 GAGE12HA6NDE8 117 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 PRSS1P07477 247 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 XGP55808 180 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 Q8N1X5 172 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 RPS10P5Q9NQ39 176 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 LINC00959A0A1B0GUT2 108 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 GNB1LQ9BYB4 327 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
COLCA2-201ENST00000398035 C1orf196B1AJZ1 125 aa12.27□□□□□ -0.45
COLCA2-201ENST00000398035 K7EMI3 77 aa12.27□□□□□ -0.45
COLCA2-201ENST00000398035 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.45
COLCA2-201ENST00000398035 DNAH5Q8TE73 4624 aa12.26□□□□□ -0.45
COLCA2-201ENST00000398035 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
COLCA2-201ENST00000398035 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
COLCA2-201ENST00000398035 CD164L2Q6UWJ8 174 aa12.25□□□□□ -0.45
COLCA2-201ENST00000398035 SVBPQ8N300 66 aa12.25□□□□□ -0.45
COLCA2-201ENST00000398035 LOC389332A0A1B0GUA5 103 aa12.24□□□□□ -0.45
COLCA2-201ENST00000398035 SNAPINO95295 136 aa12.24□□□□□ -0.45
COLCA2-201ENST00000398035 XCL1P47992 114 aa12.24□□□□□ -0.45
COLCA2-201ENST00000398035 CNBPP62633 177 aaKnown RBP12.24□□□□□ -0.45
COLCA2-201ENST00000398035 Q8N8P6 123 aa12.24□□□□□ -0.45
COLCA2-201ENST00000398035 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
COLCA2-201ENST00000398035 RYR1P21817 5038 aa12.24□□□□□ -0.45
COLCA2-201ENST00000398035 APOC3P02656 99 aa12.23□□□□□ -0.45
COLCA2-201ENST00000398035 G0S2P27469 103 aa12.23□□□□□ -0.45
COLCA2-201ENST00000398035 FOXI1Q12951 378 aa12.23□□□□□ -0.45
COLCA2-201ENST00000398035 Q6ZSA8 131 aa12.23□□□□□ -0.45
COLCA2-201ENST00000398035 C9orf163Q8N9P6 203 aa12.23□□□□□ -0.45
COLCA2-201ENST00000398035 MT-ND6P03923 174 aa12.22□□□□□ -0.45
COLCA2-201ENST00000398035 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
COLCA2-201ENST00000398035 MRPS36P82909 103 aaKnown RBP12.22□□□□□ -0.45
COLCA2-201ENST00000398035 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
COLCA2-201ENST00000398035 PYGO1Q9Y3Y4 419 aa12.22□□□□□ -0.45
COLCA2-201ENST00000398035 IFI27P40305 119 aaPredicted RBP12.21□□□□□ -0.45
COLCA2-201ENST00000398035 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.45
COLCA2-201ENST00000398035 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
COLCA2-201ENST00000398035 TRAV13-1A0A0B4J241 112 aa12.2□□□□□ -0.46
COLCA2-201ENST00000398035 IGHV1-58A0A0C4DH39 117 aa12.19□□□□□ -0.46
COLCA2-201ENST00000398035 C15orf56Q8N910 161 aa12.19□□□□□ -0.46
COLCA2-201ENST00000398035 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
COLCA2-201ENST00000398035 GVQW2A0A096LPI5 108 aaPredicted RBP12.18□□□□□ -0.46
COLCA2-201ENST00000398035 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
COLCA2-201ENST00000398035 NPSP0C0P6 89 aa12.18□□□□□ -0.46
COLCA2-201ENST00000398035 KIAA1644Q3SXP7 199 aa12.18□□□□□ -0.46
COLCA2-201ENST00000398035 Q6ZUT4 128 aa12.18□□□□□ -0.46
COLCA2-201ENST00000398035 FAM229AH3BQW9 127 aa12.17□□□□□ -0.46
COLCA2-201ENST00000398035 MALP21145 153 aa12.17□□□□□ -0.46
COLCA2-201ENST00000398035 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
COLCA2-201ENST00000398035 CHAC1Q9BUX1 264 aa12.17□□□□□ -0.46
COLCA2-201ENST00000398035 IGHV3-64A0A075B6Q5 118 aa12.16□□□□□ -0.46
COLCA2-201ENST00000398035 COX7A2LO14548 114 aa12.16□□□□□ -0.46
COLCA2-201ENST00000398035 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
COLCA2-201ENST00000398035 C2orf66Q6UXQ4 117 aa12.16□□□□□ -0.46
COLCA2-201ENST00000398035 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
COLCA2-201ENST00000398035 LINC01549A6NIU2 74 aa12.15□□□□□ -0.46
COLCA2-201ENST00000398035 ZNF561-AS1K7EIQ3 104 aa12.15□□□□□ -0.46
COLCA2-201ENST00000398035 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
COLCA2-201ENST00000398035 TMEM141Q96I45 108 aa12.15□□□□□ -0.46
COLCA2-201ENST00000398035 APOMO95445 188 aa12.14□□□□□ -0.47
COLCA2-201ENST00000398035 PAPPA-AS1Q5QFB9 102 aa12.14□□□□□ -0.47
COLCA2-201ENST00000398035 Q6ZN92 141 aa12.14□□□□□ -0.47
COLCA2-201ENST00000398035 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
COLCA2-201ENST00000398035 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
COLCA2-201ENST00000398035 ALKBH7Q9BT30 221 aaPredicted RBP12.14□□□□□ -0.47
COLCA2-201ENST00000398035 MRPL18Q9H0U6 180 aaKnown RBP12.14□□□□□ -0.47
COLCA2-201ENST00000398035 HSPG2P98160 4391 aa12.13□□□□□ -0.47
COLCA2-201ENST00000398035 SMR3BP02814 79 aaPredicted RBP12.13□□□□□ -0.47
COLCA2-201ENST00000398035 SLPIP03973 132 aa12.13□□□□□ -0.47
COLCA2-201ENST00000398035 HIGD2BQ4VC39 106 aa12.13□□□□□ -0.47
COLCA2-201ENST00000398035 PKIGQ9Y2B9 76 aa12.13□□□□□ -0.47
COLCA2-201ENST00000398035 APOBP04114 4563 aaKnown RBP12.13□□□□□ -0.47
COLCA2-201ENST00000398035 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
COLCA2-201ENST00000398035 TEX43Q6ZNM6 134 aa12.12□□□□□ -0.47
COLCA2-201ENST00000398035 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
COLCA2-201ENST00000398035 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
COLCA2-201ENST00000398035 SCXQ7RTU7 201 aa12.11□□□□□ -0.47
COLCA2-201ENST00000398035 C2orf88Q9BSF0 95 aa12.11□□□□□ -0.47
COLCA2-201ENST00000398035 KRTAP17-1Q9BYP8 105 aa12.11□□□□□ -0.47
COLCA2-201ENST00000398035 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms