RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 C11orf72Q8NBR9 251 aa12.49□□□□□ -0.41
EWSR1-206ENST00000397938 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
EWSR1-206ENST00000397938 DAZ4Q86SG3 579 aaKnown RBP12.49□□□□□ -0.41
EWSR1-206ENST00000397938 LINC00643Q86TS7 51 aa12.49□□□□□ -0.41
EWSR1-206ENST00000397938 DAZ3Q9NR90 486 aaKnown RBP12.49□□□□□ -0.41
EWSR1-206ENST00000397938 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
EWSR1-206ENST00000397938 SMIM1B2RUZ4 78 aa12.48□□□□□ -0.41
EWSR1-206ENST00000397938 RS1O15537 224 aa12.47□□□□□ -0.41
EWSR1-206ENST00000397938 SDIM1Q6ZPB5 146 aa12.47□□□□□ -0.41
EWSR1-206ENST00000397938 FAM19A3Q7Z5A8 133 aa12.47□□□□□ -0.41
EWSR1-206ENST00000397938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.47□□□□□ -0.412e-8■■■■□ 24.7
EWSR1-206ENST00000397938 ATP5J2P56134 94 aa12.46□□□□□ -0.41
EWSR1-206ENST00000397938 C3orf56Q8N813 242 aa12.46□□□□□ -0.41
EWSR1-206ENST00000397938 UBE2E2Q96LR5 201 aa12.45□□□□□ -0.42
EWSR1-206ENST00000397938 C22orf24Q9Y442 160 aa12.45□□□□□ -0.42
EWSR1-206ENST00000397938 B4DSR2 109 aa12.45□□□□□ -0.42
EWSR1-206ENST00000397938 BAALC-AS2P0C853 105 aa12.45□□□□□ -0.42
EWSR1-206ENST00000397938 PRIMA1Q86XR5 153 aa12.45□□□□□ -0.42
EWSR1-206ENST00000397938 FAM222AQ5U5X8 452 aa12.44□□□□□ -0.42
EWSR1-206ENST00000397938 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
EWSR1-206ENST00000397938 LINC00694P0DN24 101 aa12.44□□□□□ -0.42
EWSR1-206ENST00000397938 FAM218AQ96MZ4 157 aa12.44□□□□□ -0.42
EWSR1-206ENST00000397938 PEMTQ9UBM1 199 aa12.44□□□□□ -0.42
EWSR1-206ENST00000397938 NDUFA7O95182 113 aa12.43□□□□□ -0.42
EWSR1-206ENST00000397938 LY6DQ14210 128 aa12.43□□□□□ -0.42
EWSR1-206ENST00000397938 CSPG4Q6UVK1 2322 aa12.43□□□□□ -0.42
EWSR1-206ENST00000397938 SLURP1P55000 103 aa12.43□□□□□ -0.42
EWSR1-206ENST00000397938 PPDPFQ9H3Y8 114 aa12.43□□□□□ -0.42
EWSR1-206ENST00000397938 C3orf22Q8N5N4 141 aa12.42□□□□□ -0.42
EWSR1-206ENST00000397938 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
EWSR1-206ENST00000397938 F5H768 121 aa12.41□□□□□ -0.42
EWSR1-206ENST00000397938 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
EWSR1-206ENST00000397938 INSP01308 110 aa12.41□□□□□ -0.42
EWSR1-206ENST00000397938 ATP5G1P05496 136 aa12.41□□□□□ -0.42
EWSR1-206ENST00000397938 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
EWSR1-206ENST00000397938 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.42
EWSR1-206ENST00000397938 GNLYP22749 145 aa12.4□□□□□ -0.42
EWSR1-206ENST00000397938 CXCL5P42830 114 aa12.4□□□□□ -0.42
EWSR1-206ENST00000397938 C9orf153Q5TBE3 101 aa12.4□□□□□ -0.42
EWSR1-206ENST00000397938 C5orf38Q86SI9 138 aa12.4□□□□□ -0.42
EWSR1-206ENST00000397938 DEFB136Q30KP8 78 aa12.39□□□□□ -0.43
EWSR1-206ENST00000397938 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
EWSR1-206ENST00000397938 UQCRQO14949 82 aa12.39□□□□□ -0.43
EWSR1-206ENST00000397938 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
EWSR1-206ENST00000397938 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
EWSR1-206ENST00000397938 CREBBPQ92793 2442 aa12.39□□□□□ -0.43
EWSR1-206ENST00000397938 C18orf65Q6ZTR6 163 aa12.38□□□□□ -0.43
EWSR1-206ENST00000397938 VPREB3Q9UKI3 123 aa12.38□□□□□ -0.43
EWSR1-206ENST00000397938 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
EWSR1-206ENST00000397938 NTM-AS1Q6ZSK4 140 aa12.37□□□□□ -0.43
EWSR1-206ENST00000397938 PF4P02776 101 aa12.37□□□□□ -0.43
EWSR1-206ENST00000397938 CDC42SE2Q9NRR3 84 aa12.37□□□□□ -0.43
EWSR1-206ENST00000397938 TRAV13-2A0A0B4J235 113 aa12.36□□□□□ -0.43
EWSR1-206ENST00000397938 MALP21145 153 aa12.36□□□□□ -0.43
EWSR1-206ENST00000397938 GAGE2AQ6NT46 116 aa12.36□□□□□ -0.43
EWSR1-206ENST00000397938 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
EWSR1-206ENST00000397938 RPL36AP83881 106 aaKnown RBP12.36□□□□□ -0.43
EWSR1-206ENST00000397938 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
EWSR1-206ENST00000397938 RPL36ALQ969Q0 106 aaKnown RBP12.36□□□□□ -0.43
EWSR1-206ENST00000397938 Q9HAA7 133 aa12.36□□□□□ -0.43
EWSR1-206ENST00000397938 CRPP02741 224 aa12.35□□□□□ -0.43
EWSR1-206ENST00000397938 IL17DQ8TAD2 202 aa12.35□□□□□ -0.43
EWSR1-206ENST00000397938 Q96MF0 132 aa12.35□□□□□ -0.43
EWSR1-206ENST00000397938 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
EWSR1-206ENST00000397938 K7EQD1 137 aa12.34□□□□□ -0.43
EWSR1-206ENST00000397938 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
EWSR1-206ENST00000397938 CELSR2Q9HCU4 2923 aa12.34□□□□□ -0.43
EWSR1-206ENST00000397938 TRGV1A0A0A0MS02 117 aa12.34□□□□□ -0.43
EWSR1-206ENST00000397938 LINC00337Q8N6G1 96 aa12.33□□□□□ -0.44
EWSR1-206ENST00000397938 LINC01356Q8N9X3 169 aa12.33□□□□□ -0.44
EWSR1-206ENST00000397938 HIST1H4AP62805 103 aaKnown RBP12.33□□□□□ -0.44
EWSR1-206ENST00000397938 XCL2Q9UBD3 114 aa12.33□□□□□ -0.44
EWSR1-206ENST00000397938 DYNLRB2Q8TF09 96 aa12.32□□□□□ -0.44
EWSR1-206ENST00000397938 OVOL2Q9BRP0 275 aa12.32□□□□□ -0.44
EWSR1-206ENST00000397938 SPG11Q96JI7 2443 aa12.32□□□□□ -0.44
EWSR1-206ENST00000397938 IGKV2-28A0A075B6P5 120 aa12.32□□□□□ -0.44
EWSR1-206ENST00000397938 IGKV2D-28P01615 120 aa12.32□□□□□ -0.44
EWSR1-206ENST00000397938 COX7CP15954 63 aa12.32□□□□□ -0.44
EWSR1-206ENST00000397938 MIR7-3HGQ8N6C7 128 aa12.31□□□□□ -0.44
EWSR1-206ENST00000397938 C1orf158Q8N1D5 194 aa12.3□□□□□ -0.44
EWSR1-206ENST00000397938 C2orf48Q96LS8 159 aa12.3□□□□□ -0.44
EWSR1-206ENST00000397938 SND1-IT1Q9HBX3 110 aa12.3□□□□□ -0.44
EWSR1-206ENST00000397938 A0A087WYN8 130 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 J3QLI3 93 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 DEFB114Q30KQ6 69 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 Q6YL49 198 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 DNAL4O96015 105 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 DSCR9P59020 149 aa12.29□□□□□ -0.44
EWSR1-206ENST00000397938 SMIM11BQ8TCY0 68 aa12.28□□□□□ -0.44
EWSR1-206ENST00000397938 ATOX1O00244 68 aa12.28□□□□□ -0.44
EWSR1-206ENST00000397938 Q6ZTI0 123 aa12.28□□□□□ -0.44
EWSR1-206ENST00000397938 TMEM243Q9BU79 118 aa12.28□□□□□ -0.44
EWSR1-206ENST00000397938 UBE2L6O14933 153 aa12.27□□□□□ -0.44
EWSR1-206ENST00000397938 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.44
EWSR1-206ENST00000397938 CRYGAP11844 174 aa12.26□□□□□ -0.45
EWSR1-206ENST00000397938 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
EWSR1-206ENST00000397938 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
EWSR1-206ENST00000397938 KLK5Q9Y337 293 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-206ENST00000397938 OBSCN-AS1Q96MR7 158 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms