RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 UBE2WQ96B02 151 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 TIMM9Q9Y5J7 89 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 EML6Q6ZMW3 1958 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 CTXND1A0A1B0GTU2 59 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 PINLYPA6NC86 204 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 C19orf84I3L1E1 186 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 LECT2O14960 151 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 EFNA4P52798 201 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 KRTAP10-9P60411 292 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 C7orf65Q6ZTY9 151 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 XAGE1AQ9HD64 81 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 U3KQA8 63 aa4.53□□□□□ -1.68
SMCO1-201ENST00000397537 TLN2Q9Y4G6 2542 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 TMEM223A0PJW6 202 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 C19orf71A6NCJ1 209 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 PPYP01298 95 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 IGHV1-46P01743 117 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 MGST1P10620 155 aaKnown RBP4.52□□□□□ -1.69
SMCO1-201ENST00000397537 SUPT4H1P63272 117 aaKnown RBP4.52□□□□□ -1.69
SMCO1-201ENST00000397537 SS18Q15532 418 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 DEFB121Q5J5C9 76 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 SOSTDC1Q6X4U4 206 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 DIRC1Q969H9 104 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 IFI27L1Q96BM0 104 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 LINC00574Q9H8X3 128 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 DYNLRB1Q9NP97 96 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 LRP4O75096 1905 aa4.52□□□□□ -1.69
SMCO1-201ENST00000397537 A6NDX4 124 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 H3BVH4 76 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 TIMM17BO60830 172 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 HBDP02042 147 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 PRRC2AP48634 2157 aaKnown RBP4.51□□□□□ -1.69
SMCO1-201ENST00000397537 CNEP1R1Q8N9A8 125 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 Q8N9W7 124 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 SNRNP200O75643 2136 aaKnown RBP4.51□□□□□ -1.69
SMCO1-201ENST00000397537 H7C423 109 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.51□□□□□ -1.69
SMCO1-201ENST00000397537 LINC01560Q8TB33 94 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 KIAA1549Q9HCM3 1950 aa4.51□□□□□ -1.69
SMCO1-201ENST00000397537 RP1P56715 2156 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 SH2D1AO60880 128 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 SLC25A16P16260 332 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 C2orf83Q53S99 150 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 PATE2Q6UY27 113 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 ZNF714Q96N38 554 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 ZNRD1Q9P1U0 126 aa4.5□□□□□ -1.69
SMCO1-201ENST00000397537 CUBNO60494 3623 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 PIN1P1O15428 100 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 NDUFC1O43677 76 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 FXYD7P58549 80 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
SMCO1-201ENST00000397537 DEFB109BQ30KR1 87 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 ARL17AQ8IVW1 177 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 SCGB3A1Q96QR1 104 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 ABCA4P78363 2273 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 CRYM-AS1A6NIL9 109 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 C10orf142B7Z368 130 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 LY6HO94772 140 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 IGHV1-69P01742 117 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 CISD3P0C7P0 127 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 COX6B1P14854 86 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 IGFL3Q6UXB1 125 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 Q6ZTC4 211 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 TYMSOSQ8TAI1 123 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 U3KQK5 164 aa4.49□□□□□ -1.69
SMCO1-201ENST00000397537 ANK2Q01484 3957 aa4.48□□□□□ -1.69
SMCO1-201ENST00000397537 TDRD6O60522 2096 aaKnown RBP4.48□□□□□ -1.69
SMCO1-201ENST00000397537 IGLV3-9A0A075B6K5 115 aa4.48□□□□□ -1.69
SMCO1-201ENST00000397537 SMIM27A0A1W2PRY6 76 aa4.48□□□□□ -1.69
SMCO1-201ENST00000397537 BCE1O60756 84 aa4.48□□□□□ -1.69
SMCO1-201ENST00000397537 V9GYV3 84 aa4.48□□□□□ -1.69
SMCO1-201ENST00000397537 GTF3C1Q12789 2109 aa4.47□□□□□ -1.69
SMCO1-201ENST00000397537 TRBV25-1A0A075B6N4 114 aa4.47□□□□□ -1.69
SMCO1-201ENST00000397537 TRBV10-2A0A0K0K1G8 114 aa4.47□□□□□ -1.69
SMCO1-201ENST00000397537 A0A1B0GWA3 101 aa4.47□□□□□ -1.69
SMCO1-201ENST00000397537 C17orf51A8MQB3 221 aa4.47□□□□□ -1.69
SMCO1-201ENST00000397537 NANOS3P60323 173 aaKnown RBP4.47□□□□□ -1.69
SMCO1-201ENST00000397537 ATXN8Q156A1 80 aa4.47□□□□□ -1.69
SMCO1-201ENST00000397537 TMSB15BA0A087X1C1 80 aa4.46□□□□□ -1.69
SMCO1-201ENST00000397537 NDUFAF8A1L188 74 aa4.46□□□□□ -1.69
SMCO1-201ENST00000397537 Q8N8P6 123 aa4.46□□□□□ -1.69
SMCO1-201ENST00000397537 SMR3AQ99954 134 aa4.46□□□□□ -1.69
SMCO1-201ENST00000397537 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.69
SMCO1-201ENST00000397537 TMEM14AQ9Y6G1 99 aa4.46□□□□□ -1.69
SMCO1-201ENST00000397537 RYR3Q15413 4870 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 A8MUU9 505 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 RNASE2P10153 161 aaKnown RBP4.46□□□□□ -1.7
SMCO1-201ENST00000397537 CKS2P33552 79 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 SDIM1Q6ZPB5 146 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 RPRMLQ8N4K4 120 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 PFN4Q8NHR9 129 aa4.46□□□□□ -1.7
SMCO1-201ENST00000397537 SMCR5Q8TEV8 140 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms