RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 C14orf177Q52M58 125 aa16.74■□□□□ 0.27
TSPAN4-207ENST00000397411 MRPL52Q86TS9 123 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-207ENST00000397411 GCSHP23434 173 aa16.73■□□□□ 0.27
TSPAN4-207ENST00000397411 DNAH11Q96DT5 4516 aa16.73■□□□□ 0.27
TSPAN4-207ENST00000397411 ZNF664Q8N3J9 261 aa16.72■□□□□ 0.27
TSPAN4-207ENST00000397411 GNB1LQ9BYB4 327 aa16.72■□□□□ 0.27
TSPAN4-207ENST00000397411 KIAA1644Q3SXP7 199 aa16.71■□□□□ 0.27
TSPAN4-207ENST00000397411 PKHD1P08F94 4074 aa16.7■□□□□ 0.26
TSPAN4-207ENST00000397411 USP17L23D6RBM5 183 aa16.7■□□□□ 0.26
TSPAN4-207ENST00000397411 CDC42SE2Q9NRR3 84 aa16.7■□□□□ 0.26
TSPAN4-207ENST00000397411 GAGE12HA6NDE8 117 aa16.69■□□□□ 0.26
TSPAN4-207ENST00000397411 PRSS47A8MTI9 375 aa16.69■□□□□ 0.26
TSPAN4-207ENST00000397411 KRTAP26-1Q6PEX3 210 aa16.69■□□□□ 0.26
TSPAN4-207ENST00000397411 UBE2D4Q9Y2X8 147 aa16.69■□□□□ 0.26
TSPAN4-207ENST00000397411 SS18Q15532 418 aa16.68■□□□□ 0.26
TSPAN4-207ENST00000397411 Q8N8P6 123 aa16.68■□□□□ 0.26
TSPAN4-207ENST00000397411 MT-ND6P03923 174 aa16.67■□□□□ 0.26
TSPAN4-207ENST00000397411 SLC7A5P1Q8MH63 180 aa16.67■□□□□ 0.26
TSPAN4-207ENST00000397411 CHCHD10Q8WYQ3 142 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-207ENST00000397411 TIMM21Q9BVV7 248 aa16.67■□□□□ 0.26
TSPAN4-207ENST00000397411 CSDC2Q9Y534 153 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-207ENST00000397411 DYNC1H1Q14204 4646 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-207ENST00000397411 RPL39P62891 51 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-207ENST00000397411 FABP9Q0Z7S8 132 aa16.66■□□□□ 0.26
TSPAN4-207ENST00000397411 LINC00959A0A1B0GUT2 108 aa16.65■□□□□ 0.26
TSPAN4-207ENST00000397411 TGIF2-C20orf24A0A0A6YYL0 155 aa16.64■□□□□ 0.25
TSPAN4-207ENST00000397411 KRTAP10-1P60331 282 aa16.64■□□□□ 0.25
TSPAN4-207ENST00000397411 MRPL18Q9H0U6 180 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-207ENST00000397411 NXT2Q9NPJ8 142 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-207ENST00000397411 CDK2AP2O75956 126 aa16.63■□□□□ 0.25
TSPAN4-207ENST00000397411 XCL1P47992 114 aa16.63■□□□□ 0.25
TSPAN4-207ENST00000397411 RNASE13Q5GAN3 156 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-207ENST00000397411 CFAP161Q6P656 301 aa16.63■□□□□ 0.25
TSPAN4-207ENST00000397411 SPANXA1Q9NS26 97 aa16.63■□□□□ 0.25
TSPAN4-207ENST00000397411 CCL25O15444 150 aa16.62■□□□□ 0.25
TSPAN4-207ENST00000397411 ORMDL2Q53FV1 153 aa16.62■□□□□ 0.25
TSPAN4-207ENST00000397411 IFI27P40305 119 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-207ENST00000397411 PRSS3P2Q8NHM4 247 aa16.61■□□□□ 0.25
TSPAN4-207ENST00000397411 hDV102S1A0JD36 115 aa16.6■□□□□ 0.25
TSPAN4-207ENST00000397411 K7EMI3 77 aa16.6■□□□□ 0.25
TSPAN4-207ENST00000397411 PRSS1P07477 247 aa16.6■□□□□ 0.25
TSPAN4-207ENST00000397411 Q6ZUT4 128 aa16.6■□□□□ 0.25
TSPAN4-207ENST00000397411 TRAPPC1Q9Y5R8 145 aa16.6■□□□□ 0.25
TSPAN4-207ENST00000397411 TRAV13-1A0A0B4J241 112 aa16.59■□□□□ 0.25
TSPAN4-207ENST00000397411 C1orf196B1AJZ1 125 aa16.59■□□□□ 0.25
TSPAN4-207ENST00000397411 ALKBH7Q9BT30 221 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-207ENST00000397411 AP5S1Q9NUS5 200 aa16.59■□□□□ 0.25
TSPAN4-207ENST00000397411 CYSLTR1Q9Y271 337 aa16.58■□□□□ 0.24
TSPAN4-207ENST00000397411 G0S2P27469 103 aa16.57■□□□□ 0.24
TSPAN4-207ENST00000397411 OPRPNQ99935 248 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-207ENST00000397411 FOXI1Q12951 378 aa16.56■□□□□ 0.24
TSPAN4-207ENST00000397411 SMCO4Q9NRQ5 59 aa16.56■□□□□ 0.24
TSPAN4-207ENST00000397411 MRPS36P82909 103 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-207ENST00000397411 LINC01620Q4KN68 170 aa16.55■□□□□ 0.24
TSPAN4-207ENST00000397411 CD164L2Q6UWJ8 174 aa16.55■□□□□ 0.24
TSPAN4-207ENST00000397411 C2orf66Q6UXQ4 117 aa16.55■□□□□ 0.24
TSPAN4-207ENST00000397411 PYGO1Q9Y3Y4 419 aa16.54■□□□□ 0.24
TSPAN4-207ENST00000397411 KIAA1109Q2LD37 5005 aa16.53■□□□□ 0.24
TSPAN4-207ENST00000397411 DNAH5Q8TE73 4624 aa16.52■□□□□ 0.24
TSPAN4-207ENST00000397411 IFITM10A6NMD0 228 aa16.52■□□□□ 0.24
TSPAN4-207ENST00000397411 FA2HQ7L5A8 372 aa16.52■□□□□ 0.24
TSPAN4-207ENST00000397411 MALP21145 153 aa16.51■□□□□ 0.23
TSPAN4-207ENST00000397411 HIGD2BQ4VC39 106 aa16.51■□□□□ 0.23
TSPAN4-207ENST00000397411 TMEM141Q96I45 108 aa16.51■□□□□ 0.23
TSPAN4-207ENST00000397411 LRP1BQ9NZR2 4599 aa16.5■□□□□ 0.23
TSPAN4-207ENST00000397411 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-207ENST00000397411 Q6ZN92 141 aa16.5■□□□□ 0.23
TSPAN4-207ENST00000397411 C15orf56Q8N910 161 aa16.5■□□□□ 0.23
TSPAN4-207ENST00000397411 IGHV1-58A0A0C4DH39 117 aa16.49■□□□□ 0.23
TSPAN4-207ENST00000397411 COX7A2LO14548 114 aa16.49■□□□□ 0.23
TSPAN4-207ENST00000397411 IGLV4-3A0A075B6K6 122 aa16.48■□□□□ 0.23
TSPAN4-207ENST00000397411 TEX43Q6ZNM6 134 aa16.48■□□□□ 0.23
TSPAN4-207ENST00000397411 CBLN2Q8IUK8 224 aa16.48■□□□□ 0.23
TSPAN4-207ENST00000397411 FAM104AQ969W3 186 aa16.48■□□□□ 0.23
TSPAN4-207ENST00000397411 XGP55808 180 aa16.47■□□□□ 0.23
TSPAN4-207ENST00000397411 C2orf88Q9BSF0 95 aa16.47■□□□□ 0.23
TSPAN4-207ENST00000397411 VCX2Q9H322 139 aa16.47■□□□□ 0.23
TSPAN4-207ENST00000397411 C5orf38Q86SI9 138 aa16.46■□□□□ 0.23
TSPAN4-207ENST00000397411 C9orf163Q8N9P6 203 aa16.46■□□□□ 0.23
TSPAN4-207ENST00000397411 CNBPP62633 177 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-207ENST00000397411 PAPPA-AS1Q5QFB9 102 aa16.45■□□□□ 0.22
TSPAN4-207ENST00000397411 TOMM6Q96B49 74 aa16.45■□□□□ 0.22
TSPAN4-207ENST00000397411 YPEL4Q96NS1 127 aa16.45■□□□□ 0.22
TSPAN4-207ENST00000397411 FAM30AQ9NZY2 134 aa16.45■□□□□ 0.22
TSPAN4-207ENST00000397411 GVQW2A0A096LPI5 108 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-207ENST00000397411 ZNF561-AS1K7EIQ3 104 aa16.44■□□□□ 0.22
TSPAN4-207ENST00000397411 SCGB3A1Q96QR1 104 aa16.44■□□□□ 0.22
TSPAN4-207ENST00000397411 LINC01549A6NIU2 74 aa16.43■□□□□ 0.22
TSPAN4-207ENST00000397411 APOMO95445 188 aa16.43■□□□□ 0.22
TSPAN4-207ENST00000397411 NPSP0C0P6 89 aa16.43■□□□□ 0.22
TSPAN4-207ENST00000397411 HAMPP81172 84 aa16.43■□□□□ 0.22
TSPAN4-207ENST00000397411 IGIPA6NJ69 53 aa16.42■□□□□ 0.22
TSPAN4-207ENST00000397411 IGHV3-64A0A075B6Q5 118 aa16.41■□□□□ 0.22
TSPAN4-207ENST00000397411 LINC01546A6NGU7 62 aa16.41■□□□□ 0.22
TSPAN4-207ENST00000397411 C18orf32Q8TCD1 76 aa16.41■□□□□ 0.22
TSPAN4-207ENST00000397411 SLPIP03973 132 aa16.4■□□□□ 0.22
TSPAN4-207ENST00000397411 LINC00614P0C842 121 aa16.4■□□□□ 0.22
TSPAN4-207ENST00000397411 RAB5BP61020 215 aa16.4■□□□□ 0.22
TSPAN4-207ENST00000397411 ERASQ7Z444 233 aa16.4■□□□□ 0.22
TSPAN4-207ENST00000397411 TIMM17AQ99595 171 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms