RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
CBX3-202ENST00000396386 SMIM9A6NGZ8 99 aa10.62□□□□□ -0.71
CBX3-202ENST00000396386 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
CBX3-202ENST00000396386 A0A0J9YY99 117 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 K7ERJ3 54 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 KIR2DL5BQ8NHK3 375 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 LINC00612Q8N6U2 182 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 X6R8D5 127 aa10.61□□□□□ -0.71
CBX3-202ENST00000396386 UBE2D1P51668 147 aa10.6□□□□□ -0.71
CBX3-202ENST00000396386 APOC4P55056 127 aa10.6□□□□□ -0.71
CBX3-202ENST00000396386 FHL2Q14192 279 aa10.6□□□□□ -0.71
CBX3-202ENST00000396386 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
CBX3-202ENST00000396386 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
CBX3-202ENST00000396386 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
CBX3-202ENST00000396386 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
CBX3-202ENST00000396386 TMEM238LA0A1B0GVL6 79 aa10.59□□□□□ -0.71
CBX3-202ENST00000396386 A6NJY4 79 aa10.59□□□□□ -0.71
CBX3-202ENST00000396386 SRSF9Q13242 221 aaKnown RBP eCLIP10.59□□□□□ -0.71
CBX3-202ENST00000396386 NAA38Q9BRA0 125 aaKnown RBP10.59□□□□□ -0.71
CBX3-202ENST00000396386 CSDC2Q9Y534 153 aaKnown RBP10.59□□□□□ -0.71
CBX3-202ENST00000396386 A0A1W2PPM0 123 aa10.59□□□□□ -0.71
CBX3-202ENST00000396386 LINC00694P0DN24 101 aa10.59□□□□□ -0.71
CBX3-202ENST00000396386 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
CBX3-202ENST00000396386 GEMIN7Q9H840 131 aaKnown RBP10.59□□□□□ -0.71
CBX3-202ENST00000396386 UBE2L6O14933 153 aa10.58□□□□□ -0.72
CBX3-202ENST00000396386 IGHV3-30-3P0DP02 117 aa10.58□□□□□ -0.72
CBX3-202ENST00000396386 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
CBX3-202ENST00000396386 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
CBX3-202ENST00000396386 C12orf74Q32Q52 190 aa10.58□□□□□ -0.72
CBX3-202ENST00000396386 GTF2H5Q6ZYL4 71 aa10.58□□□□□ -0.72
CBX3-202ENST00000396386 A0A1B0GWB2 263 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 SAMD5Q5TGI4 173 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 WFDC9Q8NEX5 89 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 IGHV1-58A0A0C4DH39 117 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 GAGE10A6NGK3 116 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 WIPF1O43516 503 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 TIRAPP58753 221 aa10.57□□□□□ -0.72
CBX3-202ENST00000396386 ATRQ13535 2644 aa10.56□□□□□ -0.72
CBX3-202ENST00000396386 H7C423 109 aa10.56□□□□□ -0.72
CBX3-202ENST00000396386 K7EP34 96 aa10.56□□□□□ -0.72
CBX3-202ENST00000396386 FABP2P12104 132 aa10.56□□□□□ -0.72
CBX3-202ENST00000396386 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
CBX3-202ENST00000396386 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 TRAV8-3A0A0A6YYJ7 113 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 TMEM101Q96IK0 257 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 COL6A5A8TX70 2615 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 HERVK_113P63121 156 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 FAM19A3Q7Z5A8 133 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 VSIG2Q96IQ7 327 aa10.55□□□□□ -0.72
CBX3-202ENST00000396386 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
CBX3-202ENST00000396386 FBN1P35555 2871 aaKnown RBP10.54□□□□□ -0.72
CBX3-202ENST00000396386 IGLL5B9A064 214 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 TMEM238C9JI98 176 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 FAM222AQ5U5X8 452 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 C10orf126Q8N4M7 172 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 CDC42SE2Q9NRR3 84 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 CDKN2A-AS1Q9UH64 79 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 STAB1Q9NY15 2570 aa10.53□□□□□ -0.72
CBX3-202ENST00000396386 TRBV6-8A0A0A6YYG3 113 aa10.52□□□□□ -0.73
CBX3-202ENST00000396386 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
CBX3-202ENST00000396386 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
CBX3-202ENST00000396386 NDUFA12Q9UI09 145 aa10.52□□□□□ -0.73
CBX3-202ENST00000396386 TRAV13-1A0A0B4J241 112 aa10.51□□□□□ -0.73
CBX3-202ENST00000396386 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
CBX3-202ENST00000396386 GYPEP15421 78 aa10.51□□□□□ -0.73
CBX3-202ENST00000396386 ZFAND6Q6FIF0 208 aa10.51□□□□□ -0.73
CBX3-202ENST00000396386 COX6A2Q02221 97 aa10.5□□□□□ -0.73
CBX3-202ENST00000396386 GAGE6Q13070 117 aa10.5□□□□□ -0.73
CBX3-202ENST00000396386 KRTAP24-1Q3LI83 254 aa10.5□□□□□ -0.73
CBX3-202ENST00000396386 PRO0255Q9UI72 69 aa10.5□□□□□ -0.73
CBX3-202ENST00000396386 TENM1Q9UKZ4 2725 aa10.5□□□□□ -0.73
CBX3-202ENST00000396386 IGHV4-30-4P0DP06 118 aa10.49□□□□□ -0.73
CBX3-202ENST00000396386 MIFP14174 115 aa10.49□□□□□ -0.73
CBX3-202ENST00000396386 PRIMA1Q86XR5 153 aa10.49□□□□□ -0.73
CBX3-202ENST00000396386 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
CBX3-202ENST00000396386 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
CBX3-202ENST00000396386 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
CBX3-202ENST00000396386 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
CBX3-202ENST00000396386 A8MZ25 164 aa10.48□□□□□ -0.73
CBX3-202ENST00000396386 APOMO95445 188 aa10.48□□□□□ -0.73
CBX3-202ENST00000396386 Q8NAQ8 132 aa10.48□□□□□ -0.73
CBX3-202ENST00000396386 VWFP04275 2813 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 NDUFA1O15239 70 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 DEFB4AO15263 64 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 DAD1P61803 113 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 RPL24P83731 157 aaKnown RBP10.47□□□□□ -0.73
CBX3-202ENST00000396386 SMIM1B2RUZ4 78 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 RNF183Q96D59 192 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 LITAFQ99732 161 aa10.47□□□□□ -0.73
CBX3-202ENST00000396386 PAX4O43316 350 aa10.46□□□□□ -0.74
CBX3-202ENST00000396386 SPANXDQ9BXN6 97 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms