RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
HERPUD2-202ENST00000396081 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
HERPUD2-202ENST00000396081 PIK3CD-AS1Q5SR53 167 aa13.15□□□□□ -0.3
HERPUD2-202ENST00000396081 AVPP01185 164 aa13.15□□□□□ -0.3
HERPUD2-202ENST00000396081 LINC00694P0DN24 101 aa13.15□□□□□ -0.3
HERPUD2-202ENST00000396081 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.3
HERPUD2-202ENST00000396081 IMUPQ9GZP8 106 aa13.14□□□□□ -0.31
HERPUD2-202ENST00000396081 TIRAPP58753 221 aa13.14□□□□□ -0.31
HERPUD2-202ENST00000396081 C3orf22Q8N5N4 141 aa13.14□□□□□ -0.31
HERPUD2-202ENST00000396081 FAM218AQ96MZ4 157 aa13.14□□□□□ -0.31
HERPUD2-202ENST00000396081 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
HERPUD2-202ENST00000396081 LINC00242Q5T6M2 205 aa13.13□□□□□ -0.31
HERPUD2-202ENST00000396081 USP9XQ93008 2570 aaPredicted RBP13.13□□□□□ -0.31
HERPUD2-202ENST00000396081 HERVK_113P63121 156 aa13.12□□□□□ -0.31
HERPUD2-202ENST00000396081 IGHV4-30-2A0A087WSY4 118 aa13.12□□□□□ -0.31
HERPUD2-202ENST00000396081 DEFB136Q30KP8 78 aa13.12□□□□□ -0.31
HERPUD2-202ENST00000396081 CUBNO60494 3623 aa13.12□□□□□ -0.31
HERPUD2-202ENST00000396081 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 EDA2RQ9HAV5 297 aa13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 MSMBP08118 114 aa13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 ATP5J2P56134 94 aa13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 IGHV3-53P01767 116 aa13.11□□□□□ -0.31
HERPUD2-202ENST00000396081 LOC107984640A0A0U1RRK4 108 aa13.1□□□□□ -0.31
HERPUD2-202ENST00000396081 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
HERPUD2-202ENST00000396081 LY6DQ14210 128 aa13.1□□□□□ -0.31
HERPUD2-202ENST00000396081 UQCRQO14949 82 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 TRACP01848 142 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 DEFB112Q30KQ8 113 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 COPS9Q8WXC6 57 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 SLURP1P55000 103 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 CCL19Q99731 98 aa13.09□□□□□ -0.31
HERPUD2-202ENST00000396081 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.32
HERPUD2-202ENST00000396081 TOMM7Q9P0U1 55 aa13.08□□□□□ -0.32
HERPUD2-202ENST00000396081 CELSR2Q9HCU4 2923 aa13.08□□□□□ -0.32
HERPUD2-202ENST00000396081 IGKV3OR2-268A0A0C4DH90 116 aa13.07□□□□□ -0.32
HERPUD2-202ENST00000396081 POLQO75417 2590 aa13.07□□□□□ -0.32
HERPUD2-202ENST00000396081 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
HERPUD2-202ENST00000396081 DNAJC30Q96LL9 226 aa13.07□□□□□ -0.32
HERPUD2-202ENST00000396081 DNAL4O96015 105 aa13.06□□□□□ -0.32
HERPUD2-202ENST00000396081 SDIM1Q6ZPB5 146 aa13.06□□□□□ -0.32
HERPUD2-202ENST00000396081 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
HERPUD2-202ENST00000396081 PEMTQ9UBM1 199 aa13.06□□□□□ -0.32
HERPUD2-202ENST00000396081 BEAN1Q3B7T3 259 aa13.06□□□□□ -0.32
HERPUD2-202ENST00000396081 TRGV1A0A0A0MS02 117 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 CRPP02741 224 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 MALP21145 153 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 C18orf65Q6ZTR6 163 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 IGKV3D-7A0A0C4DH55 119 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 KHDC1LQ5JSQ8 128 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 LINC00526Q96FQ7 95 aa13.05□□□□□ -0.32
HERPUD2-202ENST00000396081 UBE2E2Q96LR5 201 aa13.04□□□□□ -0.32
HERPUD2-202ENST00000396081 C22orf24Q9Y442 160 aa13.04□□□□□ -0.32
HERPUD2-202ENST00000396081 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
HERPUD2-202ENST00000396081 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
HERPUD2-202ENST00000396081 C14orf132Q9NPU4 83 aa13.04□□□□□ -0.32
HERPUD2-202ENST00000396081 ZANQ9Y493 2812 aa13.04□□□□□ -0.32
HERPUD2-202ENST00000396081 JMJD1CQ15652 2540 aa13.03□□□□□ -0.32
HERPUD2-202ENST00000396081 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
HERPUD2-202ENST00000396081 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
HERPUD2-202ENST00000396081 SETD2Q9BYW2 2564 aaPredicted RBP13.03□□□□□ -0.32
HERPUD2-202ENST00000396081 NBL1P41271 181 aa13.02□□□□□ -0.32
HERPUD2-202ENST00000396081 hADV29S1A0JD25 119 aa13.02□□□□□ -0.33
HERPUD2-202ENST00000396081 COX7CP15954 63 aa13.02□□□□□ -0.33
HERPUD2-202ENST00000396081 UCNP55089 124 aa13.02□□□□□ -0.33
HERPUD2-202ENST00000396081 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.33
HERPUD2-202ENST00000396081 TLN2Q9Y4G6 2542 aa13.02□□□□□ -0.33
HERPUD2-202ENST00000396081 ATP5G1P05496 136 aa13.02□□□□□ -0.33
HERPUD2-202ENST00000396081 PTPN13Q12923 2485 aa13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 CSMD2Q7Z408 3487 aa13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 RPL36AP83881 106 aaKnown RBP13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 C5orf38Q86SI9 138 aa13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 RNF152Q8N8N0 203 aa13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 RPL36ALQ969Q0 106 aaKnown RBP13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 CSDC2Q9Y534 153 aaKnown RBP13.01□□□□□ -0.33
HERPUD2-202ENST00000396081 INSP01308 110 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 LINC00158P58513 81 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 C9orf129Q5T035 196 aaKnown RBP13□□□□□ -0.33
HERPUD2-202ENST00000396081 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 TRAV13-2A0A0B4J235 113 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 B4DSR2 109 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 DYNLRB2Q8TF09 96 aa13□□□□□ -0.33
HERPUD2-202ENST00000396081 A0A087WYN8 130 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 GNLYP22749 145 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 Q96MF0 132 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 CXCL5P42830 114 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 NTM-AS1Q6ZSK4 140 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 PRORYQ9H606 182 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 UBE2L6O14933 153 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 FAM222AQ5U5X8 452 aa12.99□□□□□ -0.33
HERPUD2-202ENST00000396081 CENPEQ02224 2701 aa12.98□□□□□ -0.33
HERPUD2-202ENST00000396081 NRGNQ92686 78 aa12.98□□□□□ -0.33
HERPUD2-202ENST00000396081 MAP6D1Q9H9H5 199 aa12.98□□□□□ -0.33
HERPUD2-202ENST00000396081 A0A1B0GX51 115 aa12.97□□□□□ -0.33
HERPUD2-202ENST00000396081 F5H768 121 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms