RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TRBV7-3A0A075B6L6 115 aa8.68□□□□□ -1.02
ITGB1-202ENST00000396033 RPL36AP83881 106 aaKnown RBP8.68□□□□□ -1.02
ITGB1-202ENST00000396033 RPL36ALQ969Q0 106 aaKnown RBP8.68□□□□□ -1.02
ITGB1-202ENST00000396033 CEMP1Q6PRD7 247 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-202ENST00000396033 OVOL2Q9BRP0 275 aa8.67□□□□□ -1.02
ITGB1-202ENST00000396033 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
ITGB1-202ENST00000396033 TRBV10-1A0A0K0K1A3 114 aa8.67□□□□□ -1.02
ITGB1-202ENST00000396033 CEND1Q8N111 149 aa8.67□□□□□ -1.02
ITGB1-202ENST00000396033 SLC25A29Q8N8R3 303 aa8.67□□□□□ -1.02
ITGB1-202ENST00000396033 MYMXA0A1B0GTQ4 84 aa8.67□□□□□ -1.02
ITGB1-202ENST00000396033 MT-ATP8P03928 68 aa8.67□□□□□ -1.02
ITGB1-202ENST00000396033 XGP55808 180 aa8.66□□□□□ -1.02
ITGB1-202ENST00000396033 SPANXA1Q9NS26 97 aa8.66□□□□□ -1.02
ITGB1-202ENST00000396033 UBE2D4Q9Y2X8 147 aa8.66□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE12JA6NER3 117 aa8.65□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE4Q13068 117 aa8.65□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE5Q13069 117 aa8.65□□□□□ -1.02
ITGB1-202ENST00000396033 GAGE13Q4V321 117 aa8.65□□□□□ -1.02
ITGB1-202ENST00000396033 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
ITGB1-202ENST00000396033 A0A1B0GV72 72 aa8.65□□□□□ -1.03
ITGB1-202ENST00000396033 ZNF815PA8K554 130 aa8.65□□□□□ -1.03
ITGB1-202ENST00000396033 TSPAN13O95857 204 aa8.65□□□□□ -1.03
ITGB1-202ENST00000396033 FAM104AQ969W3 186 aa8.65□□□□□ -1.03
ITGB1-202ENST00000396033 AMELXQ99217 191 aa8.65□□□□□ -1.03
ITGB1-202ENST00000396033 A0A0J9YXV3 536 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 F8W1H4 67 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 TRGV4A0A0C4DH28 118 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 UBE2D3P61077 147 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 UBE2D2P62837 147 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 C12orf74Q32Q52 190 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
ITGB1-202ENST00000396033 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
ITGB1-202ENST00000396033 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
ITGB1-202ENST00000396033 Q6ZUT4 128 aa8.63□□□□□ -1.03
ITGB1-202ENST00000396033 ZNF22P17026 224 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-202ENST00000396033 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
ITGB1-202ENST00000396033 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 X6R8D5 127 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 TRBV6-4A0A1B0GX49 114 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 LOC100131303A0A0U1RQF7 123 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 DGAT2L7PQ6IED9 249 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 WFDC9Q8NEX5 89 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 RNF183Q96D59 192 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
ITGB1-202ENST00000396033 NHLRC4P0CG21 123 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-202ENST00000396033 APOC4P55056 127 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 TAL2Q16559 108 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 SMIM9A6NGZ8 99 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 MRPS36P82909 103 aaKnown RBP8.61□□□□□ -1.03
ITGB1-202ENST00000396033 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 NTM-AS1Q6ZSK4 140 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
ITGB1-202ENST00000396033 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
ITGB1-202ENST00000396033 FOXI1Q12951 378 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 FHL2Q14192 279 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 KIR2DL5BQ8NHK3 375 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 J3QQQ9 107 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
ITGB1-202ENST00000396033 LEPROTO15243 131 aa8.59□□□□□ -1.03
ITGB1-202ENST00000396033 LINC00694P0DN24 101 aa8.59□□□□□ -1.03
ITGB1-202ENST00000396033 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
ITGB1-202ENST00000396033 SFTA2Q6UW10 78 aa8.59□□□□□ -1.04
ITGB1-202ENST00000396033 TINCRA0A1B0GVN0 87 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 LINC00612Q8N6U2 182 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 SS18L2Q9UHA2 77 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 UBE2L6O14933 153 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 WIPF1O43516 503 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 SBSPONQ8IVN8 264 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
ITGB1-202ENST00000396033 UBE2D1P51668 147 aa8.57□□□□□ -1.04
ITGB1-202ENST00000396033 FAM222AQ5U5X8 452 aa8.57□□□□□ -1.04
ITGB1-202ENST00000396033 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
ITGB1-202ENST00000396033 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-202ENST00000396033 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
ITGB1-202ENST00000396033 A0A0J9YY99 117 aa8.56□□□□□ -1.04
ITGB1-202ENST00000396033 DEFB4AO15263 64 aa8.56□□□□□ -1.04
ITGB1-202ENST00000396033 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
ITGB1-202ENST00000396033 IGHV4-30-4P0DP06 118 aa8.56□□□□□ -1.04
ITGB1-202ENST00000396033 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
ITGB1-202ENST00000396033 LYRM9A8MSI8 78 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 APOMO95445 188 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 IGHV4-28A0A0C4DH34 117 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 SHISA2Q6UWI4 295 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 TMEM101Q96IK0 257 aa8.55□□□□□ -1.04
ITGB1-202ENST00000396033 C3orf56Q8N813 242 aa8.54□□□□□ -1.04
ITGB1-202ENST00000396033 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
ITGB1-202ENST00000396033 GYPEP15421 78 aa8.53□□□□□ -1.04
ITGB1-202ENST00000396033 OXLD1Q5BKU9 147 aa8.53□□□□□ -1.04
ITGB1-202ENST00000396033 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms