RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 LINC01006Q8NI28 216 aa4.82□□□□□ -1.64
BDNF-203ENST00000395978 LINC00467Q9BRT7 94 aa4.82□□□□□ -1.64
BDNF-203ENST00000395978 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 RNASE1P07998 156 aaKnown RBP4.81□□□□□ -1.64
BDNF-203ENST00000395978 PFN2P35080 140 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 TIRAPP58753 221 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 LOC400499M0QZD8 3231 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 A0A0J9YXY3 114 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 RS1O15537 224 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 FAM19A4Q96LR4 140 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 KIF25-AS1Q9Y6Z4 181 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 DCHS1Q96JQ0 3298 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 C9orf66Q5T8R8 295 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
BDNF-203ENST00000395978 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
BDNF-203ENST00000395978 G3V4G9 280 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 TSPAN13O95857 204 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 ATP6V0E2Q8NHE4 81 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 CDKN2A-AS1Q9UH64 79 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 USP24Q9UPU5 2620 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 A0A096LPF7 62 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 GYPEP15421 78 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 GAGE2BQ13066 116 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 ODF3L2Q3SX64 289 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 C5orf38Q86SI9 138 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 TEN1Q86WV5 123 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 DAND5Q8N907 189 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 NTN5Q8WTR8 489 aaPredicted RBP4.8□□□□□ -1.64
BDNF-203ENST00000395978 UBE2WQ96B02 151 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 LINC00315P59091 139 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 OVOL2Q9BRP0 275 aa4.8□□□□□ -1.64
BDNF-203ENST00000395978 RELNP78509 3460 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 CRLF1O75462 422 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 XCL1P47992 114 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 INSL3P51460 131 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 S100A7L2Q5SY68 101 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 ZFAND6Q6FIF0 208 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 ANKRD29Q8N6D5 301 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 IGLV4-69A0A075B6H9 119 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 A0A0B4J2C4 111 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 ANGP03950 147 aaKnown RBP4.79□□□□□ -1.64
BDNF-203ENST00000395978 LINC01620Q4KN68 170 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 CARD19Q96LW7 228 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 ICOSQ9Y6W8 199 aa4.79□□□□□ -1.64
BDNF-203ENST00000395978 MAP1AP78559 2803 aaPredicted RBP4.78□□□□□ -1.64
BDNF-203ENST00000395978 MIAQ16674 131 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 IGHV3-30P01768 117 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 IGHV3-30-5P0DP03 117 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 UFSP1Q6NVU6 142 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 CLPSL2Q6UWE3 100 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 ADGRG4Q8IZF6 3080 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 F8WDY8 70 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 TCL1BO95988 128 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 PLA2G2AP14555 144 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 FOXI1Q12951 378 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 Q8N2B8 174 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 C3orf56Q8N813 242 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
BDNF-203ENST00000395978 HILS1P60008 231 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 MRPS36P82909 103 aaKnown RBP4.77□□□□□ -1.65
BDNF-203ENST00000395978 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 PTH2Q96A98 100 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 FAM110AQ9BQ89 295 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 PRO0255Q9UI72 69 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 TRBV6-4A0A1B0GX49 114 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 ANAPC13Q9BS18 74 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 IGHV3-33P01772 117 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 ATP5G1P05496 136 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 WFDC10AQ9H1F0 79 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 VPS13CQ709C8 3753 aa4.77□□□□□ -1.65
BDNF-203ENST00000395978 SPART-AS1P0CW21 52 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 DEFB135Q30KP9 77 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 C4orf48Q5BLP8 95 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 SND1-IT1Q9HBX3 110 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 RETNQ9HD89 108 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 INAFM2P0DMQ5 153 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 C1orf158Q8N1D5 194 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 A8MZ25 164 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 FSHBP01225 129 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 UBE2D1P51668 147 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 BEAN1Q3B7T3 259 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 POM121L12Q8N7R1 296 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 ESM1Q9NQ30 184 aa4.76□□□□□ -1.65
BDNF-203ENST00000395978 H7C423 109 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 GHRHP01286 108 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 TRBV10-2A0A0K0K1G8 114 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 SMIM9A6NGZ8 99 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 DEFB4AO15263 64 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 SCGB1A1P11684 91 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 TSPEAR-AS2P59090 65 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 NDUFA1O15239 70 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 RBMY1FQ15415 496 aaKnown RBP4.75□□□□□ -1.65
BDNF-203ENST00000395978 C5orf47Q569G3 176 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 MIR7-3HGQ8N6C7 128 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 IGSF10Q6WRI0 2623 aa4.75□□□□□ -1.65
BDNF-203ENST00000395978 TRBV6-8A0A0A6YYG3 113 aa4.74□□□□□ -1.65
BDNF-203ENST00000395978 IGLV1-51P01701 117 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms