RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 PFN2P35080 140 aa12.37□□□□□ -0.43
PTPA-207ENST00000393370 SPTBN1Q01082 2364 aaKnown RBP12.37□□□□□ -0.43
PTPA-207ENST00000393370 HILS1P60008 231 aa12.37□□□□□ -0.43
PTPA-207ENST00000393370 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
PTPA-207ENST00000393370 C5orf56Q8N8D9 126 aa12.37□□□□□ -0.43
PTPA-207ENST00000393370 IGHV1OR15-1A0A075B7D0 117 aa12.36□□□□□ -0.43
PTPA-207ENST00000393370 A0A087WYN8 130 aa12.36□□□□□ -0.43
PTPA-207ENST00000393370 IGLV5-45A0A087WSX0 123 aa12.36□□□□□ -0.43
PTPA-207ENST00000393370 ZNF415Q09FC8 603 aa12.36□□□□□ -0.43
PTPA-207ENST00000393370 SAA4P35542 130 aa12.35□□□□□ -0.43
PTPA-207ENST00000393370 LINC01560Q8TB33 94 aa12.35□□□□□ -0.43
PTPA-207ENST00000393370 IGLV5-39A0A0G2JS06 123 aa12.34□□□□□ -0.43
PTPA-207ENST00000393370 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
PTPA-207ENST00000393370 COPS9Q8WXC6 57 aa12.34□□□□□ -0.43
PTPA-207ENST00000393370 SPTA1P02549 2419 aa12.34□□□□□ -0.43
PTPA-207ENST00000393370 RPL28P46779 137 aaKnown RBP12.34□□□□□ -0.43
PTPA-207ENST00000393370 IGHV3-38A0A0C4DH36 116 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 SIRPDQ9H106 197 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 PRO0628Q9UI54 55 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 ACACBO00763 2458 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 KNCNA6PVL3 124 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 OBSCN-AS1Q96MR7 158 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 PTPRQQ9UMZ3 2332 aa12.33□□□□□ -0.44
PTPA-207ENST00000393370 NCR3O14931 201 aa12.32□□□□□ -0.44
PTPA-207ENST00000393370 GHRHP01286 108 aa12.32□□□□□ -0.44
PTPA-207ENST00000393370 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
PTPA-207ENST00000393370 J3QLI3 93 aa12.32□□□□□ -0.44
PTPA-207ENST00000393370 Q6ZSN1 163 aa12.32□□□□□ -0.44
PTPA-207ENST00000393370 NDUFC2O95298 119 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 TMEM243Q9BU79 118 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 ATRXP46100 2492 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 CACNA1AO00555 2505 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 TRAV23DV6A0A075B6W5 121 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 HTN1P15515 57 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 PRORYQ9H606 182 aa12.31□□□□□ -0.44
PTPA-207ENST00000393370 IGHV3OR16-12A0A075B7B8 117 aa12.3□□□□□ -0.44
PTPA-207ENST00000393370 SMIM1B2RUZ4 78 aa12.3□□□□□ -0.44
PTPA-207ENST00000393370 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
PTPA-207ENST00000393370 C20orf197Q8N268 126 aa12.3□□□□□ -0.44
PTPA-207ENST00000393370 NBASA2RRP1 2371 aa12.3□□□□□ -0.44
PTPA-207ENST00000393370 LINC00242Q5T6M2 205 aa12.3□□□□□ -0.44
PTPA-207ENST00000393370 C1orf43Q9BWL3 253 aa12.29□□□□□ -0.44
PTPA-207ENST00000393370 TRAV13-2A0A0B4J235 113 aa12.28□□□□□ -0.44
PTPA-207ENST00000393370 FAM236DA0A1B0GTK5 79 aa12.28□□□□□ -0.44
PTPA-207ENST00000393370 CRPP02741 224 aa12.28□□□□□ -0.44
PTPA-207ENST00000393370 FAM236CP0DP71 79 aa12.28□□□□□ -0.44
PTPA-207ENST00000393370 IGKV2-28A0A075B6P5 120 aa12.27□□□□□ -0.44
PTPA-207ENST00000393370 IGKV2D-28P01615 120 aa12.27□□□□□ -0.44
PTPA-207ENST00000393370 SMIM11BQ8TCY0 68 aa12.27□□□□□ -0.44
PTPA-207ENST00000393370 TLN1Q9Y490 2541 aaKnown RBP12.27□□□□□ -0.44
PTPA-207ENST00000393370 RBMY1BA6NDE4 496 aaKnown RBP12.27□□□□□ -0.45
PTPA-207ENST00000393370 RBMY1EA6NEQ0 496 aaKnown RBP12.27□□□□□ -0.45
PTPA-207ENST00000393370 PRM2P04554 102 aa12.27□□□□□ -0.45
PTPA-207ENST00000393370 RBMY1DP0C7P1 496 aaKnown RBP12.27□□□□□ -0.45
PTPA-207ENST00000393370 RBMY1A1P0DJD3 496 aaKnown RBP12.27□□□□□ -0.45
PTPA-207ENST00000393370 RBMY1CP0DJD4 496 aa12.27□□□□□ -0.45
PTPA-207ENST00000393370 RBMY1FQ15415 496 aaKnown RBP12.27□□□□□ -0.45
PTPA-207ENST00000393370 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.45
PTPA-207ENST00000393370 DOPEY2Q9Y3R5 2298 aa12.27□□□□□ -0.45
PTPA-207ENST00000393370 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
PTPA-207ENST00000393370 FAM19A1Q7Z5A9 133 aa12.26□□□□□ -0.45
PTPA-207ENST00000393370 SLPIP03973 132 aa12.26□□□□□ -0.45
PTPA-207ENST00000393370 GRNP28799 593 aaKnown RBP12.26□□□□□ -0.45
PTPA-207ENST00000393370 OVOL2Q9BRP0 275 aa12.26□□□□□ -0.45
PTPA-207ENST00000393370 LECT2O14960 151 aa12.25□□□□□ -0.45
PTPA-207ENST00000393370 PF4P02776 101 aa12.25□□□□□ -0.45
PTPA-207ENST00000393370 RPL35AP18077 110 aaKnown RBP12.25□□□□□ -0.45
PTPA-207ENST00000393370 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
PTPA-207ENST00000393370 CELSR1Q9NYQ6 3014 aa12.25□□□□□ -0.45
PTPA-207ENST00000393370 XCL1P47992 114 aa12.25□□□□□ -0.45
PTPA-207ENST00000393370 PIMREGQ9BSJ6 248 aa12.25□□□□□ -0.45
PTPA-207ENST00000393370 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
PTPA-207ENST00000393370 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
PTPA-207ENST00000393370 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
PTPA-207ENST00000393370 SORL1Q92673 2214 aa12.24□□□□□ -0.45
PTPA-207ENST00000393370 SERP1Q9Y6X1 66 aa12.23□□□□□ -0.45
PTPA-207ENST00000393370 H7BZZ5 65 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 PSMB8P28062 276 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 SS18Q15532 418 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 ENHOQ6UWT2 76 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 MIR7-3HGQ8N6C7 128 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 USMG5Q96IX5 58 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
PTPA-207ENST00000393370 HRNRQ86YZ3 2850 aaPredicted RBP12.22□□□□□ -0.45
PTPA-207ENST00000393370 COL6A6A6NMZ7 2263 aa12.21□□□□□ -0.45
PTPA-207ENST00000393370 CCKP06307 115 aa12.21□□□□□ -0.45
PTPA-207ENST00000393370 C16orf95Q9H693 158 aa12.2□□□□□ -0.46
PTPA-207ENST00000393370 EPG5Q9HCE0 2579 aa12.2□□□□□ -0.46
PTPA-207ENST00000393370 PKD1L2Q7Z442 2459 aa12.2□□□□□ -0.46
PTPA-207ENST00000393370 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
PTPA-207ENST00000393370 F8WDY8 70 aa12.19□□□□□ -0.46
PTPA-207ENST00000393370 H0YGX0 51 aa12.19□□□□□ -0.46
PTPA-207ENST00000393370 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
PTPA-207ENST00000393370 RPL36AP83881 106 aaKnown RBP12.19□□□□□ -0.46
PTPA-207ENST00000393370 WFDC11Q8NEX6 87 aa12.19□□□□□ -0.46
PTPA-207ENST00000393370 RPL36ALQ969Q0 106 aaKnown RBP12.19□□□□□ -0.46
PTPA-207ENST00000393370 FP248Q71RG6 208 aaPredicted RBP12.18□□□□□ -0.46
PTPA-207ENST00000393370 Q96MF0 132 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms