RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 M0QXV9 152 aa11.96□□□□□ -0.49
PHTF1-205ENST00000393357 IGHG2P01859 326 aa11.96□□□□□ -0.49
PHTF1-205ENST00000393357 UBE2E2Q96LR5 201 aa11.96□□□□□ -0.49
PHTF1-205ENST00000393357 APRG1Q8IVJ8 170 aa11.96□□□□□ -0.49
PHTF1-205ENST00000393357 C11orf44Q8N8P7 122 aa11.96□□□□□ -0.49
PHTF1-205ENST00000393357 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
PHTF1-205ENST00000393357 BAALC-AS2P0C853 105 aa11.96□□□□□ -0.5
PHTF1-205ENST00000393357 SDIM1Q6ZPB5 146 aa11.96□□□□□ -0.5
PHTF1-205ENST00000393357 A0A0J9YX75 114 aa11.95□□□□□ -0.5
PHTF1-205ENST00000393357 RNASE1P07998 156 aaKnown RBP11.95□□□□□ -0.5
PHTF1-205ENST00000393357 NRGNQ92686 78 aa11.95□□□□□ -0.5
PHTF1-205ENST00000393357 MED14OSP0DP75 135 aa11.95□□□□□ -0.5
PHTF1-205ENST00000393357 LINC01587Q99440 93 aa11.95□□□□□ -0.5
PHTF1-205ENST00000393357 ATP5G1P05496 136 aa11.94□□□□□ -0.5
PHTF1-205ENST00000393357 FAM110AQ9BQ89 295 aa11.94□□□□□ -0.5
PHTF1-205ENST00000393357 C9orf85Q96MD7 179 aa11.94□□□□□ -0.5
PHTF1-205ENST00000393357 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
PHTF1-205ENST00000393357 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
PHTF1-205ENST00000393357 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
PHTF1-205ENST00000393357 H3BT86 120 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 IGHV4-59P01825 116 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 FAM104AQ969W3 186 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 VPREB3Q9UKI3 123 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 A0A087WVE0 104 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 TINCRA0A1B0GVN0 87 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 C19orf84I3L1E1 186 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 USMG5Q96IX5 58 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 XCL2Q9UBD3 114 aa11.92□□□□□ -0.5
PHTF1-205ENST00000393357 TEX15Q9BXT5 2789 aa11.91□□□□□ -0.5
PHTF1-205ENST00000393357 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
PHTF1-205ENST00000393357 FAM218AQ96MZ4 157 aa11.91□□□□□ -0.5
PHTF1-205ENST00000393357 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
PHTF1-205ENST00000393357 LINC00308Q8TCZ7 52 aa11.91□□□□□ -0.5
PHTF1-205ENST00000393357 ANKRD17O75179 2603 aaKnown RBP11.91□□□□□ -0.5
PHTF1-205ENST00000393357 hADV29S1A0JD25 119 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 SLPIP03973 132 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 AVPP01185 164 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 HERVK_113P63121 156 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 OR13C6PQ8NH95 151 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 C14orf132Q9NPU4 83 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 CFAP46Q8IYW2 2715 aa11.9□□□□□ -0.5
PHTF1-205ENST00000393357 UBE2D4Q9Y2X8 147 aa11.89□□□□□ -0.51
PHTF1-205ENST00000393357 K7ENP7 123 aa11.88□□□□□ -0.51
PHTF1-205ENST00000393357 PFN2P35080 140 aa11.88□□□□□ -0.51
PHTF1-205ENST00000393357 TIRAPP58753 221 aa11.88□□□□□ -0.51
PHTF1-205ENST00000393357 SLURP1P55000 103 aa11.88□□□□□ -0.51
PHTF1-205ENST00000393357 YAE1D1Q9NRH1 226 aa11.88□□□□□ -0.51
PHTF1-205ENST00000393357 ACANP16112 2415 aa11.87□□□□□ -0.51
PHTF1-205ENST00000393357 ATP5J2P56134 94 aa11.87□□□□□ -0.51
PHTF1-205ENST00000393357 C9orf129Q5T035 196 aaKnown RBP11.87□□□□□ -0.51
PHTF1-205ENST00000393357 Q6Q795 121 aa11.87□□□□□ -0.51
PHTF1-205ENST00000393357 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
PHTF1-205ENST00000393357 GCN1Q92616 2671 aaKnown RBP11.87□□□□□ -0.51
PHTF1-205ENST00000393357 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
PHTF1-205ENST00000393357 HIST1H4AP62805 103 aaKnown RBP11.86□□□□□ -0.51
PHTF1-205ENST00000393357 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
PHTF1-205ENST00000393357 PIMREGQ9BSJ6 248 aa11.85□□□□□ -0.51
PHTF1-205ENST00000393357 IGHV4-30-2A0A087WSY4 118 aa11.85□□□□□ -0.51
PHTF1-205ENST00000393357 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
PHTF1-205ENST00000393357 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
PHTF1-205ENST00000393357 SPANXCQ9NY87 97 aa11.85□□□□□ -0.51
PHTF1-205ENST00000393357 DNAL4O96015 105 aa11.84□□□□□ -0.51
PHTF1-205ENST00000393357 LINC00158P58513 81 aa11.84□□□□□ -0.51
PHTF1-205ENST00000393357 CYSTM1Q9H1C7 97 aa11.84□□□□□ -0.51
PHTF1-205ENST00000393357 HIVEP2P31629 2446 aa11.84□□□□□ -0.51
PHTF1-205ENST00000393357 K7EQG2 157 aa11.83□□□□□ -0.52
PHTF1-205ENST00000393357 COX7A2LO14548 114 aa11.83□□□□□ -0.52
PHTF1-205ENST00000393357 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
PHTF1-205ENST00000393357 A0A1W2PRX2 142 aa11.82□□□□□ -0.52
PHTF1-205ENST00000393357 NCR3O14931 201 aa11.82□□□□□ -0.52
PHTF1-205ENST00000393357 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
PHTF1-205ENST00000393357 C3orf22Q8N5N4 141 aa11.82□□□□□ -0.52
PHTF1-205ENST00000393357 A0A1B0GX51 115 aa11.81□□□□□ -0.52
PHTF1-205ENST00000393357 LINC00242Q5T6M2 205 aa11.81□□□□□ -0.52
PHTF1-205ENST00000393357 FBXL19-AS1Q494R0 122 aa11.81□□□□□ -0.52
PHTF1-205ENST00000393357 MIR7-3HGQ8N6C7 128 aa11.81□□□□□ -0.52
PHTF1-205ENST00000393357 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
PHTF1-205ENST00000393357 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
PHTF1-205ENST00000393357 RBMY1DP0C7P1 496 aaKnown RBP11.8□□□□□ -0.52
PHTF1-205ENST00000393357 A0A087WYN8 130 aa11.8□□□□□ -0.52
PHTF1-205ENST00000393357 A6NDX4 124 aa11.8□□□□□ -0.52
PHTF1-205ENST00000393357 DSCR8Q96T75 97 aa11.8□□□□□ -0.52
PHTF1-205ENST00000393357 PLA2G2AP14555 144 aa11.79□□□□□ -0.52
PHTF1-205ENST00000393357 CRPP02741 224 aa11.79□□□□□ -0.52
PHTF1-205ENST00000393357 LINC00643Q86TS7 51 aa11.79□□□□□ -0.52
PHTF1-205ENST00000393357 LECT2O14960 151 aa11.78□□□□□ -0.52
PHTF1-205ENST00000393357 PAX4O43316 350 aa11.78□□□□□ -0.52
PHTF1-205ENST00000393357 CLPSL2Q6UWE3 100 aa11.78□□□□□ -0.52
PHTF1-205ENST00000393357 TRBV7-7A0A0K0K1E9 115 aa11.78□□□□□ -0.52
PHTF1-205ENST00000393357 IGLV1-40P01703 118 aa11.78□□□□□ -0.52
PHTF1-205ENST00000393357 FAM19A5Q7Z5A7 132 aaPredicted RBP11.78□□□□□ -0.52
PHTF1-205ENST00000393357 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
PHTF1-205ENST00000393357 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.52
PHTF1-205ENST00000393357 NDUFA1O15239 70 aa11.77□□□□□ -0.52
PHTF1-205ENST00000393357 PRB1P04280 392 aa11.77□□□□□ -0.52
PHTF1-205ENST00000393357 C5orf38Q86SI9 138 aa11.77□□□□□ -0.52
PHTF1-205ENST00000393357 CCL19Q99731 98 aa11.77□□□□□ -0.52
PHTF1-205ENST00000393357 SPANXA1Q9NS26 97 aa11.77□□□□□ -0.52
PHTF1-205ENST00000393357 APCP25054 2843 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms