RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 CSPG4Q6UVK1 2322 aa11.29□□□□□ -0.6
PTGFRN-201ENST00000393203 C3orf84H3BNL1 204 aa11.29□□□□□ -0.6
PTGFRN-201ENST00000393203 PDE6GP18545 87 aa11.29□□□□□ -0.6
PTGFRN-201ENST00000393203 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
PTGFRN-201ENST00000393203 TECTAO75443 2155 aa11.28□□□□□ -0.6
PTGFRN-201ENST00000393203 ANKHD1Q8IWZ3 2542 aaKnown RBP11.28□□□□□ -0.6
PTGFRN-201ENST00000393203 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
PTGFRN-201ENST00000393203 WFDC10BQ8IUB3 73 aa11.28□□□□□ -0.6
PTGFRN-201ENST00000393203 A0A0J9YWU9 116 aa11.27□□□□□ -0.6
PTGFRN-201ENST00000393203 TRBV6-8A0A0A6YYG3 113 aa11.27□□□□□ -0.61
PTGFRN-201ENST00000393203 C1orf158Q8N1D5 194 aa11.27□□□□□ -0.61
PTGFRN-201ENST00000393203 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
PTGFRN-201ENST00000393203 WFDC10AQ9H1F0 79 aa11.27□□□□□ -0.61
PTGFRN-201ENST00000393203 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
PTGFRN-201ENST00000393203 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
PTGFRN-201ENST00000393203 H7C423 109 aa11.26□□□□□ -0.61
PTGFRN-201ENST00000393203 Q6YL49 198 aa11.26□□□□□ -0.61
PTGFRN-201ENST00000393203 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 EDN2P20800 178 aa11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 Q6ZSV7 163 aa11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 NDUFA7O95182 113 aa11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 EBI3Q14213 229 aa11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 FAM19A5Q7Z5A7 132 aaPredicted RBP11.25□□□□□ -0.61
PTGFRN-201ENST00000393203 PRR4Q16378 134 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 FAM19A1Q7Z5A9 133 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 POM121L12Q8N7R1 296 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 IGKV2-28A0A075B6P5 120 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 IGKV2D-28P01615 120 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 SORL1Q92673 2214 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 LST1O00453 97 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 SMIM11BQ8TCY0 68 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 UBE2D4Q9Y2X8 147 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 CCKP06307 115 aa11.24□□□□□ -0.61
PTGFRN-201ENST00000393203 LTBP2Q14767 1821 aa11.23□□□□□ -0.61
PTGFRN-201ENST00000393203 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
PTGFRN-201ENST00000393203 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
PTGFRN-201ENST00000393203 TTC28Q96AY4 2481 aa11.23□□□□□ -0.61
PTGFRN-201ENST00000393203 CRIP2P52943 208 aaPredicted RBP11.22□□□□□ -0.61
PTGFRN-201ENST00000393203 PTPN13Q12923 2485 aa11.22□□□□□ -0.61
PTGFRN-201ENST00000393203 B9D2Q9BPU9 175 aa11.22□□□□□ -0.61
PTGFRN-201ENST00000393203 CRYGDP07320 174 aa11.21□□□□□ -0.61
PTGFRN-201ENST00000393203 Q6ZQY7 126 aa11.21□□□□□ -0.61
PTGFRN-201ENST00000393203 ATG2AQ2TAZ0 1938 aa11.21□□□□□ -0.61
PTGFRN-201ENST00000393203 POLR2KP53803 58 aaKnown RBP11.21□□□□□ -0.61
PTGFRN-201ENST00000393203 PYGO1Q9Y3Y4 419 aa11.21□□□□□ -0.62
PTGFRN-201ENST00000393203 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
PTGFRN-201ENST00000393203 SERP2Q8N6R1 65 aa11.2□□□□□ -0.62
PTGFRN-201ENST00000393203 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.19□□□□□ -0.62
PTGFRN-201ENST00000393203 UBE2D1P51668 147 aa11.19□□□□□ -0.62
PTGFRN-201ENST00000393203 ATP5EP2Q5VTU8 51 aa11.19□□□□□ -0.62
PTGFRN-201ENST00000393203 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
PTGFRN-201ENST00000393203 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
PTGFRN-201ENST00000393203 Q8N6K4 173 aa11.18□□□□□ -0.62
PTGFRN-201ENST00000393203 LRCOL1A6NCL2 159 aa11.18□□□□□ -0.62
PTGFRN-201ENST00000393203 KLLNB2CW77 178 aa11.18□□□□□ -0.62
PTGFRN-201ENST00000393203 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 A0A087WZ39 114 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 DSCAMO60469 2012 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 ACACBO00763 2458 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
PTGFRN-201ENST00000393203 C9orf85Q96MD7 179 aa11.16□□□□□ -0.62
PTGFRN-201ENST00000393203 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
PTGFRN-201ENST00000393203 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
PTGFRN-201ENST00000393203 ZNF580Q9UK33 172 aa11.16□□□□□ -0.62
PTGFRN-201ENST00000393203 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
PTGFRN-201ENST00000393203 TIMM17BO60830 172 aa11.16□□□□□ -0.62
PTGFRN-201ENST00000393203 HIVEP2P31629 2446 aa11.15□□□□□ -0.62
PTGFRN-201ENST00000393203 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
PTGFRN-201ENST00000393203 COX7CP15954 63 aa11.15□□□□□ -0.62
PTGFRN-201ENST00000393203 C2CD3Q4AC94 2353 aa11.15□□□□□ -0.62
PTGFRN-201ENST00000393203 RPL37AP8A6NKH3 93 aa11.15□□□□□ -0.62
PTGFRN-201ENST00000393203 FAM240AA0A1B0GVK7 77 aa11.15□□□□□ -0.62
PTGFRN-201ENST00000393203 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 A0A087WVE0 104 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 OTOGLQ3ZCN5 2332 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 FAM30AQ9NZY2 134 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 IGLV4-69A0A075B6H9 119 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 HRCT1Q6UXD1 115 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 NAV3Q8IVL0 2385 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 CUL9Q8IWT3 2517 aa11.14□□□□□ -0.63
PTGFRN-201ENST00000393203 SONP18583 2426 aaKnown RBP11.13□□□□□ -0.63
PTGFRN-201ENST00000393203 EML5Q05BV3 1969 aa11.13□□□□□ -0.63
PTGFRN-201ENST00000393203 CDSNQ15517 529 aa11.13□□□□□ -0.63
PTGFRN-201ENST00000393203 SEC61GP60059 68 aa11.13□□□□□ -0.63
PTGFRN-201ENST00000393203 MRPS36P82909 103 aaKnown RBP11.12□□□□□ -0.63
PTGFRN-201ENST00000393203 COX6A2Q02221 97 aa11.12□□□□□ -0.63
PTGFRN-201ENST00000393203 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
PTGFRN-201ENST00000393203 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
PTGFRN-201ENST00000393203 SYCNQ0VAF6 134 aa11.11□□□□□ -0.63
PTGFRN-201ENST00000393203 CNFNQ9BYD5 112 aa11.11□□□□□ -0.63
PTGFRN-201ENST00000393203 IMUPQ9GZP8 106 aa11.11□□□□□ -0.63
PTGFRN-201ENST00000393203 FSTL3O95633 263 aa11.11□□□□□ -0.63
PTGFRN-201ENST00000393203 PRR3P79522 188 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms