RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 LPAL2Q16609 132 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 C1orf64Q8NEQ6 169 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 UPK3BQ9BT76 320 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 PRO0461Q9UI25 63 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 DOCK10Q96BY6 2186 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 NINQ8N4C6 2090 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 MCM3APO60318 1980 aa2.42□□□□□ -2.02
XRN1-202ENST00000392981 TDRD15B5MCY1 1934 aaKnown RBP2.41□□□□□ -2.02
XRN1-202ENST00000392981 RBAKDNA6NC62 111 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 PINLYPA6NC86 204 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 LGALS9CQ6DKI2 356 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 C20orf197Q8N268 126 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 SMCR5Q8TEV8 140 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 LINC00467Q9BRT7 94 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 DOCK9Q9BZ29 2069 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 TRBV10-2A0A0K0K1G8 114 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 C5orf67F2Z3F1 127 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 P0DMU3 169 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 FAM231AP0DMU4 169 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 FAM231CP0DMU5 169 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 GAFA1Q96PS6 74 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 KLK5Q9Y337 293 aaPredicted RBP2.41□□□□□ -2.02
XRN1-202ENST00000392981 NTM-AS1Q6ZSK4 140 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 AGPAT4-IT1Q9H0P7 198 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 KLK9Q9UKQ9 250 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 KMT2EQ8IZD2 1858 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 TRAV40A0A0B4J280 105 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 GNRH2O43555 120 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 NDUFC1O43677 76 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 PIGYQ3MUY2 71 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 COX7CP15954 63 aa2.41□□□□□ -2.02
XRN1-202ENST00000392981 RP1P56715 2156 aa2.4□□□□□ -2.02
XRN1-202ENST00000392981 CXCL16Q9H2A7 254 aa2.4□□□□□ -2.02
XRN1-202ENST00000392981 WNK2Q9Y3S1 2297 aa2.4□□□□□ -2.02
XRN1-202ENST00000392981 ZNF292O60281 2723 aa2.4□□□□□ -2.02
XRN1-202ENST00000392981 NUP205Q92621 2012 aa2.4□□□□□ -2.02
XRN1-202ENST00000392981 POLEQ07864 2286 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 TRBV7-7A0A0K0K1E9 115 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 JMJD7-PLA2G4BH0Y9G9 81 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 H0YGX0 51 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 CLPSP04118 112 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 NDPQ00604 133 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 CFAP126Q5VTH2 177 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 UNC13CQ8NB66 2214 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 IGHV3-30-3P0DP02 117 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 FXYD2P54710 66 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.4□□□□□ -2.03
XRN1-202ENST00000392981 TENM4Q6N022 2769 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 COL1A1P02452 1464 aaPredicted RBP2.4□□□□□ -2.03
XRN1-202ENST00000392981 ZNF826PQ6ZT77 177 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 LINC00643Q86TS7 51 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 DEFB105AQ8NG35 78 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 TMEM141Q96I45 108 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 NDUFA12Q9UI09 145 aa2.4□□□□□ -2.03
XRN1-202ENST00000392981 K7EM74 188 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 PDE6GP18545 87 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 LYPD6Q86Y78 171 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 SNRNP200O75643 2136 aaKnown RBP2.39□□□□□ -2.03
XRN1-202ENST00000392981 CCL8P80075 99 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 DEFB109BQ30KR1 87 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 C16orf47Q6ZP98 133 aaPredicted RBP2.39□□□□□ -2.03
XRN1-202ENST00000392981 CACNA1EQ15878 2313 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 IGKV1OR2-108A0A075B7D4 117 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 TCRBV4S1A1TA0A5B7 111 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 M0R1W7 72 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
XRN1-202ENST00000392981 QRFPP83859 136 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 PDE6HQ13956 83 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 IGHV1-18A0A0C4DH31 117 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 Q9Y3F1 56 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 FBN2P35556 2912 aa2.39□□□□□ -2.03
XRN1-202ENST00000392981 DNAH7Q8WXX0 4024 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 TRAV10A0A0B4J240 114 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 SAA2P0DJI9 122 aaPredicted RBP2.38□□□□□ -2.03
XRN1-202ENST00000392981 RHOHQ15669 191 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 Q8N9L7 120 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 HIGD1BQ9P298 99 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 ETDCA0A1B0GVM5 59 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 SMIM27A0A1W2PRY6 76 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 C2orf70A6NJV1 201 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 SCN8AQ9UQD0 1980 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 PTPRQQ9UMZ3 2332 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 IGKV2D-26A0A0A0MRZ7 120 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 TFF3Q07654 80 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 C1orf134Q5TEV5 83 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 DNAH3Q8TD57 4116 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 DIRC1Q969H9 104 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 NIPBLQ6KC79 2804 aaeCLIP2.38□□□□□ -2.033e-7■■■■■ 27.8
XRN1-202ENST00000392981 TRGV1A0A0A0MS02 117 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 C17orf98A8MV24 154 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 LY6EQ16553 131 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 DEFB112Q30KQ8 113 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 PCSK5Q92824 1860 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 CFAP46Q8IYW2 2715 aa2.38□□□□□ -2.03
XRN1-202ENST00000392981 J3QRE1 110 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms