RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 IGHV3-30P01768 117 aa18.22■□□□□ 0.51
SMARCD3-203ENST00000392811 IGHV3-30-5P0DP03 117 aa18.22■□□□□ 0.51
SMARCD3-203ENST00000392811 UBE2D1P51668 147 aa18.22■□□□□ 0.51
SMARCD3-203ENST00000392811 DGAT2L7PQ6IED9 249 aa18.22■□□□□ 0.51
SMARCD3-203ENST00000392811 SPATA3Q8NHX4 192 aa18.22■□□□□ 0.51
SMARCD3-203ENST00000392811 TRAV8-3A0A0A6YYJ7 113 aa18.21■□□□□ 0.51
SMARCD3-203ENST00000392811 LINC00694P0DN24 101 aa18.21■□□□□ 0.51
SMARCD3-203ENST00000392811 C2CD3Q4AC94 2353 aa18.21■□□□□ 0.5
SMARCD3-203ENST00000392811 NSD1Q96L73 2696 aaPredicted RBP18.2■□□□□ 0.5
SMARCD3-203ENST00000392811 C10orf126Q8N4M7 172 aa18.19■□□□□ 0.5
SMARCD3-203ENST00000392811 IGHV1-58A0A0C4DH39 117 aa18.18■□□□□ 0.5
SMARCD3-203ENST00000392811 GEMIN7Q9H840 131 aaKnown RBP18.18■□□□□ 0.5
SMARCD3-203ENST00000392811 CIDEAO60543 219 aa18.17■□□□□ 0.5
SMARCD3-203ENST00000392811 SBSPONQ8IVN8 264 aa18.17■□□□□ 0.5
SMARCD3-203ENST00000392811 FN1P02751 2386 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-203ENST00000392811 LOC100131303A0A0U1RQF7 123 aa18.16■□□□□ 0.5
SMARCD3-203ENST00000392811 TRBV6-4A0A1B0GX49 114 aa18.16■□□□□ 0.5
SMARCD3-203ENST00000392811 PGPEP1Q9NXJ5 209 aa18.16■□□□□ 0.5
SMARCD3-203ENST00000392811 SPINK8P0C7L1 97 aa18.16■□□□□ 0.5
SMARCD3-203ENST00000392811 INSL3P51460 131 aa18.16■□□□□ 0.5
SMARCD3-203ENST00000392811 VSIG2Q96IQ7 327 aa18.16■□□□□ 0.5
SMARCD3-203ENST00000392811 TRGV4A0A0C4DH28 118 aa18.15■□□□□ 0.5
SMARCD3-203ENST00000392811 APOMO95445 188 aa18.15■□□□□ 0.5
SMARCD3-203ENST00000392811 A0A0J9YXY3 114 aa18.15■□□□□ 0.5
SMARCD3-203ENST00000392811 CRLF1O75462 422 aa18.15■□□□□ 0.5
SMARCD3-203ENST00000392811 OCIAD2Q56VL3 154 aa18.15■□□□□ 0.5
SMARCD3-203ENST00000392811 C9orf66Q5T8R8 295 aa18.15■□□□□ 0.5
SMARCD3-203ENST00000392811 TIRAPP58753 221 aa18.14■□□□□ 0.49
SMARCD3-203ENST00000392811 CSDC2Q9Y534 153 aaKnown RBP18.14■□□□□ 0.49
SMARCD3-203ENST00000392811 CDKN2A-AS1Q9UH64 79 aa18.13■□□□□ 0.49
SMARCD3-203ENST00000392811 A8MZ25 164 aa18.13■□□□□ 0.49
SMARCD3-203ENST00000392811 FHL2Q14192 279 aa18.13■□□□□ 0.49
SMARCD3-203ENST00000392811 GTSF1LQ9H1H1 148 aa18.13■□□□□ 0.49
SMARCD3-203ENST00000392811 IGLV5-45A0A087WSX0 123 aa18.12■□□□□ 0.49
SMARCD3-203ENST00000392811 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-203ENST00000392811 TMEM238C9JI98 176 aa18.11■□□□□ 0.49
SMARCD3-203ENST00000392811 CFC1BP0CG36 223 aa18.11■□□□□ 0.49
SMARCD3-203ENST00000392811 CFC1P0CG37 223 aa18.11■□□□□ 0.49
SMARCD3-203ENST00000392811 COX6A2Q02221 97 aa18.11■□□□□ 0.49
SMARCD3-203ENST00000392811 NDUFA12Q9UI09 145 aa18.11■□□□□ 0.49
SMARCD3-203ENST00000392811 TSPAN13O95857 204 aa18.1■□□□□ 0.49
SMARCD3-203ENST00000392811 FOSL1P15407 271 aa18.1■□□□□ 0.49
SMARCD3-203ENST00000392811 RBX1P62877 108 aa18.1■□□□□ 0.49
SMARCD3-203ENST00000392811 TMEM243Q9BU79 118 aa18.1■□□□□ 0.49
SMARCD3-203ENST00000392811 HIVEP1P15822 2718 aa18.1■□□□□ 0.49
SMARCD3-203ENST00000392811 LINC00242Q5T6M2 205 aa18.1■□□□□ 0.49
SMARCD3-203ENST00000392811 VWFP04275 2813 aa18.09■□□□□ 0.49
SMARCD3-203ENST00000392811 CDC42SE2Q9NRR3 84 aa18.08■□□□□ 0.49
SMARCD3-203ENST00000392811 DEFB130BP0DP73 79 aa18.08■□□□□ 0.48
SMARCD3-203ENST00000392811 DEFB130AP0DP74 79 aa18.08■□□□□ 0.48
SMARCD3-203ENST00000392811 SMAGPQ0VAQ4 97 aa18.08■□□□□ 0.48
SMARCD3-203ENST00000392811 MUSTN1Q8IVN3 82 aa18.08■□□□□ 0.48
SMARCD3-203ENST00000392811 LITAFQ99732 161 aa18.08■□□□□ 0.48
SMARCD3-203ENST00000392811 X6R8D5 127 aa18.08■□□□□ 0.48
SMARCD3-203ENST00000392811 A4D1N5 150 aa18.07■□□□□ 0.48
SMARCD3-203ENST00000392811 UBE2L6O14933 153 aa18.07■□□□□ 0.48
SMARCD3-203ENST00000392811 HERVK_113P63121 156 aa18.07■□□□□ 0.48
SMARCD3-203ENST00000392811 FAM19A3Q7Z5A8 133 aa18.07■□□□□ 0.48
SMARCD3-203ENST00000392811 KIR2DL5BQ8NHK3 375 aa18.07■□□□□ 0.48
SMARCD3-203ENST00000392811 CITED1Q99966 193 aa18.07■□□□□ 0.48
SMARCD3-203ENST00000392811 ZFAND6Q6FIF0 208 aa18.06■□□□□ 0.48
SMARCD3-203ENST00000392811 TRAV13-1A0A0B4J241 112 aa18.06■□□□□ 0.48
SMARCD3-203ENST00000392811 H3BMG7 143 aa18.06■□□□□ 0.48
SMARCD3-203ENST00000392811 LINC00612Q8N6U2 182 aa18.06■□□□□ 0.48
SMARCD3-203ENST00000392811 TMEM101Q96IK0 257 aa18.06■□□□□ 0.48
SMARCD3-203ENST00000392811 RPL24P83731 157 aaKnown RBP18.05■□□□□ 0.48
SMARCD3-203ENST00000392811 TENM1Q9UKZ4 2725 aa18.04■□□□□ 0.48
SMARCD3-203ENST00000392811 EIF4EBP3O60516 100 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-203ENST00000392811 SFTA2Q6UW10 78 aa18.03■□□□□ 0.48
SMARCD3-203ENST00000392811 PRO1854Q9UHT4 67 aa18.03■□□□□ 0.48
SMARCD3-203ENST00000392811 SMIM9A6NGZ8 99 aa18.02■□□□□ 0.48
SMARCD3-203ENST00000392811 RNF151Q2KHN1 245 aa18.02■□□□□ 0.48
SMARCD3-203ENST00000392811 ADAMTSL4-AS1Q5T5F5 129 aa18.02■□□□□ 0.48
SMARCD3-203ENST00000392811 H7C423 109 aa18.01■□□□□ 0.47
SMARCD3-203ENST00000392811 K7ERU9 68 aa18.01■□□□□ 0.47
SMARCD3-203ENST00000392811 LOC107984156A0A0G2JMH3 177 aa18.01■□□□□ 0.47
SMARCD3-203ENST00000392811 IGLV5-39A0A0G2JS06 123 aa18.01■□□□□ 0.47
SMARCD3-203ENST00000392811 ARL17AQ8IVW1 177 aa18.01■□□□□ 0.47
SMARCD3-203ENST00000392811 TRBV6-8A0A0A6YYG3 113 aa17.99■□□□□ 0.47
SMARCD3-203ENST00000392811 SPANXDQ9BXN6 97 aa17.99■□□□□ 0.47
SMARCD3-203ENST00000392811 SPANXCQ9NY87 97 aa17.99■□□□□ 0.47
SMARCD3-203ENST00000392811 F8W1H4 67 aa17.99■□□□□ 0.47
SMARCD3-203ENST00000392811 NDUFA1O15239 70 aa17.99■□□□□ 0.47
SMARCD3-203ENST00000392811 GAGE6Q13070 117 aa17.99■□□□□ 0.47
SMARCD3-203ENST00000392811 A0A0B4J2C4 111 aa17.98■□□□□ 0.47
SMARCD3-203ENST00000392811 SMIM1B2RUZ4 78 aa17.98■□□□□ 0.47
SMARCD3-203ENST00000392811 PRSS2P07478 247 aa17.98■□□□□ 0.47
SMARCD3-203ENST00000392811 WFDC2Q14508 124 aa17.97■□□□□ 0.47
SMARCD3-203ENST00000392811 CBY1Q9Y3M2 126 aa17.97■□□□□ 0.47
SMARCD3-203ENST00000392811 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.96■□□□□ 0.47
SMARCD3-203ENST00000392811 MIAQ16674 131 aa17.96■□□□□ 0.47
SMARCD3-203ENST00000392811 DEFB135Q30KP9 77 aa17.96■□□□□ 0.47
SMARCD3-203ENST00000392811 PRO0461Q9UI25 63 aa17.96■□□□□ 0.47
SMARCD3-203ENST00000392811 F5H768 121 aa17.95■□□□□ 0.46
SMARCD3-203ENST00000392811 MTURNQ8N3F0 131 aa17.95■□□□□ 0.46
SMARCD3-203ENST00000392811 TIMM17BO60830 172 aa17.94■□□□□ 0.46
SMARCD3-203ENST00000392811 IGHV3-33P01772 117 aa17.94■□□□□ 0.46
SMARCD3-203ENST00000392811 FAM222AQ5U5X8 452 aa17.94■□□□□ 0.46
SMARCD3-203ENST00000392811 PSMB2P49721 201 aa17.94■□□□□ 0.46
SMARCD3-203ENST00000392811 CHCHD5Q9BSY4 110 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms