RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 PLA2G1BP04054 148 aaKnown RBP13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 S100A8P05109 93 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 FCER1GP30273 86 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 HBBP68871 147 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 MRPL54Q6P161 138 aaKnown RBP13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 C15orf56Q8N910 161 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 KIR2DL4Q99706 377 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 CDC42SE2Q9NRR3 84 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
UBE2E3-201ENST00000392415 CKS2P33552 79 aa13.25□□□□□ -0.29
UBE2E3-201ENST00000392415 CFAP161Q6P656 301 aa13.25□□□□□ -0.29
UBE2E3-201ENST00000392415 SDIM1Q6ZPB5 146 aa13.25□□□□□ -0.29
UBE2E3-201ENST00000392415 C20orf78Q9BR46 151 aa13.25□□□□□ -0.29
UBE2E3-201ENST00000392415 F8W036 122 aa13.24□□□□□ -0.29
UBE2E3-201ENST00000392415 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
UBE2E3-201ENST00000392415 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.23□□□□□ -0.29
UBE2E3-201ENST00000392415 LINC00959A0A1B0GUT2 108 aa13.23□□□□□ -0.29
UBE2E3-201ENST00000392415 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
UBE2E3-201ENST00000392415 FOXI1Q12951 378 aa13.23□□□□□ -0.29
UBE2E3-201ENST00000392415 CLLU1Q5K131 121 aa13.23□□□□□ -0.29
UBE2E3-201ENST00000392415 ZNF664Q8N3J9 261 aa13.23□□□□□ -0.29
UBE2E3-201ENST00000392415 TNFRSF6BO95407 300 aa13.22□□□□□ -0.29
UBE2E3-201ENST00000392415 ATP5L2Q7Z4Y8 100 aa13.22□□□□□ -0.29
UBE2E3-201ENST00000392415 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
UBE2E3-201ENST00000392415 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
UBE2E3-201ENST00000392415 D6R8Y8 96 aa13.21□□□□□ -0.29
UBE2E3-201ENST00000392415 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.21□□□□□ -0.29
UBE2E3-201ENST00000392415 HERC1Q15751 4861 aa13.21□□□□□ -0.3
UBE2E3-201ENST00000392415 CCL25O15444 150 aa13.2□□□□□ -0.3
UBE2E3-201ENST00000392415 XCL1P47992 114 aa13.2□□□□□ -0.3
UBE2E3-201ENST00000392415 SMAGPQ0VAQ4 97 aa13.2□□□□□ -0.3
UBE2E3-201ENST00000392415 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
UBE2E3-201ENST00000392415 UBE2D4Q9Y2X8 147 aa13.2□□□□□ -0.3
UBE2E3-201ENST00000392415 GVQW2A0A096LPI5 108 aaPredicted RBP13.19□□□□□ -0.3
UBE2E3-201ENST00000392415 PANO1I0J062 215 aa13.19□□□□□ -0.3
UBE2E3-201ENST00000392415 PPBPP02775 128 aa13.19□□□□□ -0.3
UBE2E3-201ENST00000392415 SS18Q15532 418 aa13.19□□□□□ -0.3
UBE2E3-201ENST00000392415 IGHV3-64A0A075B6Q5 118 aa13.18□□□□□ -0.3
UBE2E3-201ENST00000392415 PHOX2AO14813 284 aa13.18□□□□□ -0.3
UBE2E3-201ENST00000392415 TCAPO15273 167 aa13.18□□□□□ -0.3
UBE2E3-201ENST00000392415 MT-ND4LP03901 98 aa13.18□□□□□ -0.3
UBE2E3-201ENST00000392415 HIGD2BQ4VC39 106 aa13.18□□□□□ -0.3
UBE2E3-201ENST00000392415 SMIM2Q9BVW6 85 aa13.18□□□□□ -0.3
UBE2E3-201ENST00000392415 NPYP01303 97 aa13.17□□□□□ -0.3
UBE2E3-201ENST00000392415 CIRBPQ14011 172 aaKnown RBP13.17□□□□□ -0.3
UBE2E3-201ENST00000392415 TMEM18Q96B42 140 aa13.17□□□□□ -0.3
UBE2E3-201ENST00000392415 TIMM21Q9BVV7 248 aa13.17□□□□□ -0.3
UBE2E3-201ENST00000392415 KRTAP10-4P60372 401 aaPredicted RBP13.16□□□□□ -0.3
UBE2E3-201ENST00000392415 IFITM2Q01629 132 aa13.16□□□□□ -0.3
UBE2E3-201ENST00000392415 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
UBE2E3-201ENST00000392415 TMEM136Q6ZRR5 245 aa13.15□□□□□ -0.3
UBE2E3-201ENST00000392415 ORMDL3Q8N138 153 aa13.15□□□□□ -0.3
UBE2E3-201ENST00000392415 IGHV1-58A0A0C4DH39 117 aa13.14□□□□□ -0.31
UBE2E3-201ENST00000392415 C1orf196B1AJZ1 125 aa13.14□□□□□ -0.31
UBE2E3-201ENST00000392415 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
UBE2E3-201ENST00000392415 RNASE13Q5GAN3 156 aaKnown RBP13.13□□□□□ -0.31
UBE2E3-201ENST00000392415 UQCC3Q6UW78 93 aa13.13□□□□□ -0.31
UBE2E3-201ENST00000392415 Q6ZUT4 128 aa13.13□□□□□ -0.31
UBE2E3-201ENST00000392415 PRELID3AQ96N28 172 aa13.13□□□□□ -0.31
UBE2E3-201ENST00000392415 LRP1Q07954 4544 aaKnown RBP13.11□□□□□ -0.31
UBE2E3-201ENST00000392415 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
UBE2E3-201ENST00000392415 COX6A2Q02221 97 aa13.11□□□□□ -0.31
UBE2E3-201ENST00000392415 SPACA4Q8TDM5 124 aa13.11□□□□□ -0.31
UBE2E3-201ENST00000392415 FAM104AQ969W3 186 aa13.11□□□□□ -0.31
UBE2E3-201ENST00000392415 TRAV13-1A0A0B4J241 112 aa13.1□□□□□ -0.31
UBE2E3-201ENST00000392415 PRSS47A8MTI9 375 aa13.1□□□□□ -0.31
UBE2E3-201ENST00000392415 ADCYAP1P18509 176 aa13.1□□□□□ -0.31
UBE2E3-201ENST00000392415 PRSS3P2Q8NHM4 247 aa13.1□□□□□ -0.31
UBE2E3-201ENST00000392415 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
UBE2E3-201ENST00000392415 LAMTOR2Q9Y2Q5 125 aa13.1□□□□□ -0.31
UBE2E3-201ENST00000392415 PKHD1L1Q86WI1 4243 aa13.09□□□□□ -0.31
UBE2E3-201ENST00000392415 A0A087WYN8 130 aa13.09□□□□□ -0.31
UBE2E3-201ENST00000392415 TMEM218A2RU14 115 aa13.09□□□□□ -0.31
UBE2E3-201ENST00000392415 FAT3Q8TDW7 4589 aa13.09□□□□□ -0.31
UBE2E3-201ENST00000392415 LINC00526Q96FQ7 95 aa13.09□□□□□ -0.31
UBE2E3-201ENST00000392415 DPH3Q96FX2 82 aa13.09□□□□□ -0.31
UBE2E3-201ENST00000392415 COX7A2LO14548 114 aa13.08□□□□□ -0.32
UBE2E3-201ENST00000392415 RAB5AP20339 215 aa13.08□□□□□ -0.32
UBE2E3-201ENST00000392415 RPL37AP61513 92 aaKnown RBP13.08□□□□□ -0.32
UBE2E3-201ENST00000392415 MRPS36P82909 103 aaKnown RBP13.08□□□□□ -0.32
UBE2E3-201ENST00000392415 IMMP2LQ96T52 175 aa13.08□□□□□ -0.32
UBE2E3-201ENST00000392415 ZNF561-AS1K7EIQ3 104 aa13.07□□□□□ -0.32
UBE2E3-201ENST00000392415 MALP21145 153 aa13.06□□□□□ -0.32
UBE2E3-201ENST00000392415 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
UBE2E3-201ENST00000392415 PLAC8Q9NZF1 115 aa13.06□□□□□ -0.32
UBE2E3-201ENST00000392415 CARD19Q96LW7 228 aa13.05□□□□□ -0.32
UBE2E3-201ENST00000392415 CTDSP1Q9GZU7 261 aa13.05□□□□□ -0.32
UBE2E3-201ENST00000392415 MAP1LC3AQ9H492 121 aa13.05□□□□□ -0.32
UBE2E3-201ENST00000392415 LOC389332A0A1B0GUA5 103 aa13.04□□□□□ -0.32
UBE2E3-201ENST00000392415 SEC11CQ9BY50 192 aa13.04□□□□□ -0.32
UBE2E3-201ENST00000392415 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
UBE2E3-201ENST00000392415 IGKV2-24A0A0C4DH68 120 aa13.03□□□□□ -0.32
UBE2E3-201ENST00000392415 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
UBE2E3-201ENST00000392415 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
UBE2E3-201ENST00000392415 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
UBE2E3-201ENST00000392415 PKIGQ9Y2B9 76 aa13.03□□□□□ -0.32
UBE2E3-201ENST00000392415 IGLV4-69A0A075B6H9 119 aa13.02□□□□□ -0.33
UBE2E3-201ENST00000392415 IFI27P40305 119 aaPredicted RBP13.02□□□□□ -0.33
UBE2E3-201ENST00000392415 MAJINQ3KP22 176 aa13.02□□□□□ -0.33
UBE2E3-201ENST00000392415 Q8N8P6 123 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms