RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GAGE5Q13069 117 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 GAGE13Q4V321 117 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 RAB37Q96AX2 223 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 TP53TG1Q9Y2A0 90 aa8.62□□□□□ -1.03
SPTBN1-203ENST00000389980 NMUP48645 174 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 ATP6V0E2Q8NHE4 81 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 DNAJC30Q96LL9 226 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 SCGB3A1Q96QR1 104 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 TRBV7-3A0A075B6L6 115 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 ATP5LO75964 103 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 DEFB121Q5J5C9 76 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 SBSPONQ8IVN8 264 aa8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
SPTBN1-203ENST00000389980 A6NJY4 79 aa8.6□□□□□ -1.03
SPTBN1-203ENST00000389980 MRAPQ8TCY5 172 aa8.6□□□□□ -1.03
SPTBN1-203ENST00000389980 CYSLTR1Q9Y271 337 aa8.6□□□□□ -1.03
SPTBN1-203ENST00000389980 TRBV6-4A0A1B0GX49 114 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 DAD1P61803 113 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 PCP2Q8IVA1 136 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 TTTY13Q9BZ97 58 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 TRBV10-1A0A0K0K1A3 114 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 IGKCP01834 107 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 CRYBA4P53673 196 aa8.59□□□□□ -1.03
SPTBN1-203ENST00000389980 DPM2O94777 84 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 UBE2D3P61077 147 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 UBE2D2P62837 147 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 RHOHQ15669 191 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 KPRPQ5T749 579 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 ZC2HC1BQ5TFG8 222 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 CEND1Q8N111 149 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 CHCHD7Q9BUK0 85 aa8.58□□□□□ -1.04
SPTBN1-203ENST00000389980 A0A087WX48 190 aa8.57□□□□□ -1.04
SPTBN1-203ENST00000389980 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
SPTBN1-203ENST00000389980 IGLL5B9A064 214 aa8.57□□□□□ -1.04
SPTBN1-203ENST00000389980 TSPAN13O95857 204 aa8.57□□□□□ -1.04
SPTBN1-203ENST00000389980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 HTN3P15516 51 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 GCSHP23434 173 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 CEMP1Q6PRD7 247 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 PRADC1Q9BSG0 188 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 A0A0J9YY99 117 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 DNAH9Q9NYC9 4486 aa8.56□□□□□ -1.04
SPTBN1-203ENST00000389980 GYPEP15421 78 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 FXYD2P54710 66 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 WFDC2Q14508 124 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 A0A0J9YWU9 116 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 ATP5G1P05496 136 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 SPANXA1Q9NS26 97 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 PRO0255Q9UI72 69 aa8.55□□□□□ -1.04
SPTBN1-203ENST00000389980 A0A096LPF7 62 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 F5H768 121 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 PRSS29PA6NIE9 313 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 PAX4O43316 350 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
SPTBN1-203ENST00000389980 TRBV25-1A0A075B6N4 114 aa8.53□□□□□ -1.04
SPTBN1-203ENST00000389980 F8VRH5 84 aa8.53□□□□□ -1.04
SPTBN1-203ENST00000389980 H3BMG7 143 aa8.53□□□□□ -1.04
SPTBN1-203ENST00000389980 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
SPTBN1-203ENST00000389980 RNASE13Q5GAN3 156 aaKnown RBP8.53□□□□□ -1.04
SPTBN1-203ENST00000389980 FAM104AQ969W3 186 aa8.53□□□□□ -1.04
SPTBN1-203ENST00000389980 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.04
SPTBN1-203ENST00000389980 ETDBQ3ZM63 59 aa8.52□□□□□ -1.04
SPTBN1-203ENST00000389980 TMEM141Q96I45 108 aa8.52□□□□□ -1.04
SPTBN1-203ENST00000389980 NHP2Q9NX24 153 aaKnown RBP8.52□□□□□ -1.04
SPTBN1-203ENST00000389980 FOXI1Q12951 378 aa8.52□□□□□ -1.05
SPTBN1-203ENST00000389980 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
SPTBN1-203ENST00000389980 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
SPTBN1-203ENST00000389980 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 LINC01549A6NIU2 74 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 PLNP26678 52 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 Q6ZTC4 211 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 TM2D3Q9BRN9 247 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 APOMO95445 188 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms