RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 CSTAP01040 98 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 IFNA16P05015 189 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 CST2P09228 141 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 HIST1H1EP10412 219 aaKnown RBP-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 CRYBA4P53673 196 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 RTL8BQ17RB0 113 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 BORCS8Q96FH0 119 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 DCUN1D5Q9BTE7 237 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 RTL8AQ9BWD3 113 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 V9GYH0 126 aa-3.08□□□□□ -2.9
MIR548A3-201ENST00000385297 UHRF1BP1LA0JNW5 1464 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 ABCC10Q5T3U5 1492 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 C9orf84Q5VXU9 1444 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 TMED2Q15363 201 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 DCUN1D2Q6PH85 259 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 SCIMPQ6UWF3 145 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 Q6ZUT4 128 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 CNPY4Q8N129 248 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 VPS13CQ709C8 3753 aa-3.09□□□□□ -2.9
MIR548A3-201ENST00000385297 MYH13Q9UKX3 1938 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 H3BQV1 296 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 HMGB3O15347 200 aaKnown RBP-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 APOEP02649 317 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 APOC3P02656 99 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 CALB1P05937 261 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 TNP1P09430 55 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 CRYGSP22914 178 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 LCN9Q8WX39 176 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 RPRMQ9NS64 109 aa-3.1□□□□□ -2.91
MIR548A3-201ENST00000385297 KDM5CP41229 1560 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 FABP12A6NFH5 140 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 MGPP08493 103 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 TPPP2P59282 170 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 NCALDP61601 193 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 PMS2P3Q13401 168 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 OGFRL1Q5TC84 451 aaPredicted RBP-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 FDCSPQ8NFU4 85 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 SLC35B3Q9H1N7 401 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 FGFR1OP2Q9NVK5 253 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 PRELID3BQ9Y3B1 194 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 NOP16Q9Y3C1 178 aaKnown RBP-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 LINC01558Q9Y6Z2 57 aa-3.11□□□□□ -2.91
MIR548A3-201ENST00000385297 FAM223BA6NKX1 122 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 TMEM238C9JI98 176 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 LSM3P62310 102 aaKnown RBP-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 LINC01545Q5VT33 79 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 ATP6V0E2Q8NHE4 81 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 BTF3L4Q96K17 158 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 GINS3Q9BRX5 216 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 IMP3Q9NV31 184 aaKnown RBP-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 LENEPQ9Y5L5 61 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 C1orf167Q5SNV9 1468 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 CLIP1P30622 1438 aa-3.12□□□□□ -2.91
MIR548A3-201ENST00000385297 LRRC37AA6NMS7 1700 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 TRAV13-1A0A0B4J241 112 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 RIIAD1A6NNX1 92 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 IFNA17P01571 189 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 B2MP61769 119 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 SCGB2B2Q4G0G5 96 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 LINC00305Q7Z4B0 112 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 PAIP2Q9BPZ3 127 aaKnown RBP-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 UBE2D4Q9Y2X8 147 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 CCDC144AA2RUR9 1427 aa-3.13□□□□□ -2.91
MIR548A3-201ENST00000385297 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 IGLC7A0M8Q6 106 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 H3BMG7 143 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 GABARAPH6UMI1 98 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 J3QLW9 94 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 SLC25A5P05141 298 aaKnown RBP-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 SDC2P34741 201 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 SRP9P49458 86 aaKnown RBP-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 NUP35Q8NFH5 326 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 FAM167A-AS1Q96KT0 104 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 FRYLO94915 3013 aa-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 PRG4Q92954 1404 aaPredicted RBP-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 PDCD11Q14690 1871 aaKnown RBP-3.14□□□□□ -2.91
MIR548A3-201ENST00000385297 PLEKHH2Q8IVE3 1493 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 LOC100130705A0A1B0GUX0 176 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 TRDV1A0A1B0GX56 115 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 IQCF5A8MTL0 148 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 TMEM114B3SHH9 223 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 UQCRQO14949 82 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 HSD11B1P28845 292 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 UBE2G1P62253 170 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 GPATCH11Q8N954 259 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 PTH2Q96A98 100 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 MYH3P11055 1940 aa-3.15□□□□□ -2.91
MIR548A3-201ENST00000385297 NDUFC2O95298 119 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 APOA2P02652 100 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 CSN2P05814 226 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 LCN6P62502 163 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 SKP1P63208 163 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 SEC11AP67812 179 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 CCL8P80075 99 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 SPTSSBQ8NFR3 76 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 PP6455Q8WZ26 134 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 CHMP5Q9NZZ3 219 aa-3.16□□□□□ -2.92
MIR548A3-201ENST00000385297 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.17□□□□□ -2.92
MIR548A3-201ENST00000385297 TET3O43151 1660 aa-3.17□□□□□ -2.92
MIR548A3-201ENST00000385297 TRBV7-6A0A0J9YX20 115 aa-3.17□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms