RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 MRPS15P82914 257 aaKnown RBP-2.35□□□□□ -2.79
RNU6-1040P-201ENST00000383974 NPVFQ9HCQ7 196 aa-2.35□□□□□ -2.79
RNU6-1040P-201ENST00000383974 ERG28Q9UKR5 140 aa-2.35□□□□□ -2.79
RNU6-1040P-201ENST00000383974 NRXN2Q9P2S2 1712 aa-2.35□□□□□ -2.79
RNU6-1040P-201ENST00000383974 CCDC171Q6TFL3 1326 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 E2F6O75461 281 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 SLC25A5P05141 298 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 EDDM3BP56851 147 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 GNG3P63215 75 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 TMED2Q15363 201 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 HSD17B12Q53GQ0 312 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 STX19Q8N4C7 294 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 CEP19Q96LK0 163 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 METTL1Q9UBP6 276 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 VPS13CQ709C8 3753 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 ARFGEF1Q9Y6D6 1849 aa-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.36□□□□□ -2.79
RNU6-1040P-201ENST00000383974 KIAA0556O60303 1618 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 NEFHP12036 1026 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 SPCS2Q15005 226 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 LELP1Q5T871 98 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 SMIM20Q8N5G0 67 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 DYNLRB2Q8TF09 96 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 SPRR4Q96PI1 79 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 CDC42BPAQ5VT25 1732 aa-2.37□□□□□ -2.79
RNU6-1040P-201ENST00000383974 PARP14Q460N5 1801 aa-2.38□□□□□ -2.79
RNU6-1040P-201ENST00000383974 TRAV12-3A0A0B4J271 114 aa-2.38□□□□□ -2.79
RNU6-1040P-201ENST00000383974 MRC1P22897 1456 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 FYCO1Q9BQS8 1478 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 PPIP5K1Q6PFW1 1433 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 FGF7P21781 194 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 RPL22P35268 128 aaKnown RBP-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 REEP5Q00765 189 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 WFDC13Q8IUB5 93 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 USMG5Q96IX5 58 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 UFC1Q9Y3C8 167 aa-2.39□□□□□ -2.79
RNU6-1040P-201ENST00000383974 DCHS1Q96JQ0 3298 aa-2.4□□□□□ -2.79
RNU6-1040P-201ENST00000383974 TULP4Q9NRJ4 1543 aa-2.4□□□□□ -2.79
RNU6-1040P-201ENST00000383974 F8VRH5 84 aa-2.4□□□□□ -2.79
RNU6-1040P-201ENST00000383974 RPS28P62857 69 aaKnown RBP-2.4□□□□□ -2.79
RNU6-1040P-201ENST00000383974 LINC01600Q96MT4 127 aa-2.4□□□□□ -2.79
RNU6-1040P-201ENST00000383974 IFT172Q9UG01 1749 aa-2.4□□□□□ -2.79
RNU6-1040P-201ENST00000383974 WDFY4Q6ZS81 3184 aa-2.41□□□□□ -2.79
RNU6-1040P-201ENST00000383974 HIST1H1BP16401 226 aaKnown RBP-2.41□□□□□ -2.8
RNU6-1040P-201ENST00000383974 TMEM91Q6ZNR0 172 aa-2.41□□□□□ -2.8
RNU6-1040P-201ENST00000383974 SLC35B3Q9H1N7 401 aa-2.41□□□□□ -2.8
RNU6-1040P-201ENST00000383974 MED31Q9Y3C7 131 aa-2.41□□□□□ -2.8
RNU6-1040P-201ENST00000383974 FRYLO94915 3013 aa-2.41□□□□□ -2.8
RNU6-1040P-201ENST00000383974 A2MP01023 1474 aa-2.41□□□□□ -2.8
RNU6-1040P-201ENST00000383974 H0YJX3 145 aa-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 TCRAP04437 139 aa-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 HSD11B1P28845 292 aa-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 TCTAP57738 103 aa-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 RPS29P62273 56 aaKnown RBP-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CDC42SE2Q9NRR3 84 aa-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 IBTKQ9P2D0 1353 aaPredicted RBP-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 EP400Q96L91 3159 aa-2.42□□□□□ -2.8
RNU6-1040P-201ENST00000383974 POLA1P09884 1462 aaPredicted RBP-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 TRBV7-4A0A0J9YYF1 115 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 LINC00959A0A1B0GUT2 108 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 SPAARA0A1B0GVQ0 90 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 H7BZZ5 65 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 Q6JHZ5 121 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 DCUN1D2Q6PH85 259 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 MRPL34Q9BQ48 92 aaKnown RBP-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CRIPTQ9P021 101 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 PATJQ8NI35 1801 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 MYOM3Q5VTT5 1437 aa-2.43□□□□□ -2.8
RNU6-1040P-201ENST00000383974 MAGI2Q86UL8 1455 aa-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CCDC179H3BU77 68 aa-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 PRLHP81277 87 aa-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 BAGE3Q86Y29 109 aa-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 TRAPPC2LQ9UL33 140 aa-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 NOP16Q9Y3C1 178 aaKnown RBP-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 YTHDC2Q9H6S0 1430 aaKnown RBP-2.44□□□□□ -2.8
RNU6-1040P-201ENST00000383974 ATP11AUNQ6ZP68 121 aa-2.45□□□□□ -2.8
RNU6-1040P-201ENST00000383974 ATP6V0E2Q8NHE4 81 aa-2.45□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CCDC32Q9BV29 185 aa-2.45□□□□□ -2.8
RNU6-1040P-201ENST00000383974 NDUFA12Q9UI09 145 aa-2.45□□□□□ -2.8
RNU6-1040P-201ENST00000383974 MUC3AQ02505 3323 aa-2.45□□□□□ -2.8
RNU6-1040P-201ENST00000383974 NKTRP30414 1462 aaKnown RBP-2.45□□□□□ -2.8
RNU6-1040P-201ENST00000383974 PIPP12273 146 aaPredicted RBP-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CMPK1P30085 196 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 MRPS25P82663 173 aaKnown RBP-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 HEPN1Q6WQI6 88 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 Q8N8P6 123 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 PARVGQ9HBI0 331 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 LINC00846Q9NV44 126 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CDKN2A-AS1Q9UH64 79 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 LRRC37A2A6NM11 1700 aa-2.46□□□□□ -2.8
RNU6-1040P-201ENST00000383974 SETBP1Q9Y6X0 1596 aa-2.47□□□□□ -2.8
RNU6-1040P-201ENST00000383974 CLPSL1A2RUU4 121 aa-2.47□□□□□ -2.8
RNU6-1040P-201ENST00000383974 PSPHP78330 225 aa-2.47□□□□□ -2.8
RNU6-1040P-201ENST00000383974 AKAP14Q86UN6 197 aa-2.47□□□□□ -2.8
RNU6-1040P-201ENST00000383974 PCNTO95613 3336 aa-2.48□□□□□ -2.81
RNU6-1040P-201ENST00000383974 ARPC5O15511 151 aa-2.48□□□□□ -2.81
RNU6-1040P-201ENST00000383974 TNP1P09430 55 aa-2.48□□□□□ -2.81
RNU6-1040P-201ENST00000383974 SMIM6P0DI80 62 aa-2.48□□□□□ -2.81
RNU6-1040P-201ENST00000383974 NDUFA4L2Q9NRX3 87 aa-2.48□□□□□ -2.81
RNU6-1040P-201ENST00000383974 HIGD1BQ9P298 99 aa-2.48□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms