RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ZNF418Q8TF45 676 aaPredicted RBP2.68□□□□□ -1.98
SMC6-202ENST00000381272 AMELXQ99217 191 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 GTSF1LQ9H1H1 148 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 VPREB3Q9UKI3 123 aa2.68□□□□□ -1.98
SMC6-202ENST00000381272 NACAE9PAV3 2078 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 ANKRD17O75179 2603 aaKnown RBP2.67□□□□□ -1.98
SMC6-202ENST00000381272 TEX15Q9BXT5 2789 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 USP9XQ93008 2570 aaPredicted RBP2.67□□□□□ -1.98
SMC6-202ENST00000381272 IGLV4-3A0A075B6K6 122 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 TRAV2A0A0B4J234 112 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 TMEM223A0PJW6 202 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 J3QLI3 93 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 LEPROTO15243 131 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 CD28P10747 220 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 ZNF22P17026 224 aaPredicted RBP2.67□□□□□ -1.98
SMC6-202ENST00000381272 AZU1P20160 251 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 HILS1P60008 231 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 RHOHQ15669 191 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 NFE4Q86UQ8 179 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 SLC25A29Q8N8R3 303 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 DLX4Q92988 240 aaPredicted RBP2.67□□□□□ -1.98
SMC6-202ENST00000381272 PTH2Q96A98 100 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 UBE2E2Q96LR5 201 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 VCX2Q9H322 139 aa2.67□□□□□ -1.98
SMC6-202ENST00000381272 CENPEQ02224 2701 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.66□□□□□ -1.98
SMC6-202ENST00000381272 IGHV3-38A0A0C4DH36 116 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 IGKV2-29A2NJV5 120 aaPredicted RBP2.66□□□□□ -1.98
SMC6-202ENST00000381272 TMEM238C9JI98 176 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 H3BMM0 161 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 H7C2G1 150 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 TCL1BO95988 128 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 SCGB1C2P0DMR2 95 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 UBE2D3P61077 147 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 UBE2D2P62837 147 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 SMAGPQ0VAQ4 97 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 CFAP126Q5VTH2 177 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 MUSTN1Q8IVN3 82 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 TMEM61Q8N0U2 210 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 FAM104AQ969W3 186 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 LINC01587Q99440 93 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 SIGMAR1Q99720 223 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 PRO1854Q9UHT4 67 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 PRRC2AP48634 2157 aaKnown RBP2.66□□□□□ -1.98
SMC6-202ENST00000381272 AKAP9Q99996 3911 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 POLQO75417 2590 aa2.66□□□□□ -1.98
SMC6-202ENST00000381272 TRAV8-3A0A0A6YYJ7 113 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 A0A0J9YXY3 114 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 J3QR89 54 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 M0R2P5 195 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 IGHV3-30-3P0DP02 117 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 NPC2P61916 151 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 ZNF415Q09FC8 603 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 C10orf126Q8N4M7 172 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 DYNLRB2Q8TF09 96 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 TMEM263Q8WUH6 116 aaKnown RBP2.65□□□□□ -1.98
SMC6-202ENST00000381272 CARD19Q96LW7 228 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 DOPEY1Q5JWR5 2465 aa2.65□□□□□ -1.98
SMC6-202ENST00000381272 IGHV3OR16-12A0A075B7B8 117 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 A0A0U1RRA0 63 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 A8MWV9 139 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 IGHV3-33P01772 117 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 SPINK8P0C7L1 97 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 DEFB114Q30KQ6 69 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 LINC00467Q9BRT7 94 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 CHCHD7Q9BUK0 85 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 TIMM21Q9BVV7 248 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 YAE1D1Q9NRH1 226 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 ERG28Q9UKR5 140 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 PIEZO1Q92508 2521 aa2.65□□□□□ -1.99
SMC6-202ENST00000381272 CHD6Q8TD26 2715 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 A8MTW9 85 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
SMC6-202ENST00000381272 Q1RN00 199 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 DEFB113Q30KQ7 82 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 ADAMTSL4-AS1Q5T5F5 129 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 Q6ZUT4 128 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 C11orf72Q8NBR9 251 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 C4orf3Q8WVX3 66 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 XCL2Q9UBD3 114 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 UBE2D4Q9Y2X8 147 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 PYGO1Q9Y3Y4 419 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 MYO18BQ8IUG5 2567 aa2.64□□□□□ -1.99
SMC6-202ENST00000381272 USP9YO00507 2555 aaPredicted RBP2.64□□□□□ -1.99
SMC6-202ENST00000381272 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 IGHV1-58A0A0C4DH39 117 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 TINCRA0A1B0GVN0 87 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 C9JAW5 83 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 RS1O15537 224 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 INSP01308 110 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 IGHV3-53P01767 116 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 LYRM7Q5U5X0 104 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 Q8N2B8 174 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 ANKRD29Q8N6D5 301 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 ATP6V0E2Q8NHE4 81 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 LITAFQ99732 161 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 EDA2RQ9HAV5 297 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 NDUFA12Q9UI09 145 aa2.63□□□□□ -1.99
SMC6-202ENST00000381272 ZNF469Q96JG9 3925 aaPredicted RBP2.63□□□□□ -1.99
SMC6-202ENST00000381272 TRGV1A0A0A0MS02 117 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms