RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 K7ERJ3 54 aa12.52□□□□□ -0.41
PDX1-201ENST00000381033 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
PDX1-201ENST00000381033 ZFP2Q6ZN57 461 aa12.52□□□□□ -0.41
PDX1-201ENST00000381033 TSHBP01222 138 aa12.51□□□□□ -0.41
PDX1-201ENST00000381033 NSUN5P1Q3KNT7 163 aa12.51□□□□□ -0.41
PDX1-201ENST00000381033 TP53TG1Q9Y2A0 90 aa12.51□□□□□ -0.41
PDX1-201ENST00000381033 A8MTW9 85 aa12.51□□□□□ -0.41
PDX1-201ENST00000381033 SMCPP49901 116 aaPredicted RBP12.51□□□□□ -0.41
PDX1-201ENST00000381033 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
PDX1-201ENST00000381033 NBEAL2Q6ZNJ1 2754 aa12.5□□□□□ -0.41
PDX1-201ENST00000381033 Q6ZSN1 163 aa12.5□□□□□ -0.41
PDX1-201ENST00000381033 OPRPNQ99935 248 aaPredicted RBP12.5□□□□□ -0.41
PDX1-201ENST00000381033 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
PDX1-201ENST00000381033 GCSHP23434 173 aa12.49□□□□□ -0.41
PDX1-201ENST00000381033 FXYD2P54710 66 aa12.49□□□□□ -0.41
PDX1-201ENST00000381033 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
PDX1-201ENST00000381033 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
PDX1-201ENST00000381033 KLK5Q9Y337 293 aaPredicted RBP12.49□□□□□ -0.41
PDX1-201ENST00000381033 TRRAPQ9Y4A5 3859 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 LY6G6DO95868 133 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 HILS1P60008 231 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 C1orf195Q5TG92 126 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 TEN1Q86WV5 123 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
PDX1-201ENST00000381033 K7EMI3 77 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 VCYO14598 125 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 PPP1R17O96001 155 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 KRTAP10-3P60369 221 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 TRBV27A0A0K0K1C4 114 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 F8VRH5 84 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 C3orf22Q8N5N4 141 aa12.47□□□□□ -0.41
PDX1-201ENST00000381033 H7C1H1 209 aa12.46□□□□□ -0.41
PDX1-201ENST00000381033 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
PDX1-201ENST00000381033 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
PDX1-201ENST00000381033 IGIPA6NJ69 53 aa12.46□□□□□ -0.42
PDX1-201ENST00000381033 STHQ8IWL8 128 aa12.46□□□□□ -0.42
PDX1-201ENST00000381033 IL17DQ8TAD2 202 aa12.46□□□□□ -0.42
PDX1-201ENST00000381033 FAM236DA0A1B0GTK5 79 aa12.45□□□□□ -0.42
PDX1-201ENST00000381033 FAM236CP0DP71 79 aa12.45□□□□□ -0.42
PDX1-201ENST00000381033 NHP2Q9NX24 153 aaKnown RBP12.45□□□□□ -0.42
PDX1-201ENST00000381033 ATRQ13535 2644 aa12.45□□□□□ -0.42
PDX1-201ENST00000381033 M0R2P5 195 aa12.45□□□□□ -0.42
PDX1-201ENST00000381033 C1orf158Q8N1D5 194 aa12.45□□□□□ -0.42
PDX1-201ENST00000381033 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
PDX1-201ENST00000381033 TRBV6-5A0A0K0K1A5 114 aa12.44□□□□□ -0.42
PDX1-201ENST00000381033 LINC00336Q6ZUF6 198 aa12.44□□□□□ -0.42
PDX1-201ENST00000381033 FLNBO75369 2602 aaKnown RBP12.43□□□□□ -0.42
PDX1-201ENST00000381033 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
PDX1-201ENST00000381033 INSP01308 110 aa12.43□□□□□ -0.42
PDX1-201ENST00000381033 TAL2Q16559 108 aa12.43□□□□□ -0.42
PDX1-201ENST00000381033 INAFM1C9JVW0 142 aa12.42□□□□□ -0.42
PDX1-201ENST00000381033 PLNP26678 52 aa12.42□□□□□ -0.42
PDX1-201ENST00000381033 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
PDX1-201ENST00000381033 UQCRQO14949 82 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 SPATA3Q8NHX4 192 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 PMVKQ15126 192 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 CEMP1Q6PRD7 247 aaPredicted RBP12.41□□□□□ -0.42
PDX1-201ENST00000381033 DPH3Q96FX2 82 aa12.41□□□□□ -0.42
PDX1-201ENST00000381033 IGHV3-38A0A0C4DH36 116 aa12.4□□□□□ -0.42
PDX1-201ENST00000381033 A8MZ25 164 aa12.4□□□□□ -0.42
PDX1-201ENST00000381033 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
PDX1-201ENST00000381033 RRN3P1Q2M238 152 aa12.4□□□□□ -0.42
PDX1-201ENST00000381033 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
PDX1-201ENST00000381033 GAGE2AQ6NT46 116 aa12.39□□□□□ -0.43
PDX1-201ENST00000381033 RETNQ9HD89 108 aa12.39□□□□□ -0.43
PDX1-201ENST00000381033 I3L3M4 83 aa12.38□□□□□ -0.43
PDX1-201ENST00000381033 OXTP01178 125 aa12.38□□□□□ -0.43
PDX1-201ENST00000381033 IGLV1-51P01701 117 aa12.38□□□□□ -0.43
PDX1-201ENST00000381033 RNASE13Q5GAN3 156 aaKnown RBP12.38□□□□□ -0.43
PDX1-201ENST00000381033 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 PYGO1Q9Y3Y4 419 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 A8MWV9 139 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 PF4P02776 101 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 CEND1Q8N111 149 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 HIGD1BQ9P298 99 aa12.37□□□□□ -0.43
PDX1-201ENST00000381033 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
PDX1-201ENST00000381033 Q6ZTI0 123 aa12.36□□□□□ -0.43
PDX1-201ENST00000381033 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
PDX1-201ENST00000381033 TEP1Q99973 2627 aaKnown RBP12.35□□□□□ -0.43
PDX1-201ENST00000381033 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
PDX1-201ENST00000381033 TIMM17AQ99595 171 aa12.35□□□□□ -0.43
PDX1-201ENST00000381033 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
PDX1-201ENST00000381033 TMEM170BQ5T4T1 132 aa12.34□□□□□ -0.43
PDX1-201ENST00000381033 PLEKHB2Q96CS7 222 aa12.33□□□□□ -0.44
PDX1-201ENST00000381033 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
PDX1-201ENST00000381033 BEAN1Q3B7T3 259 aa12.33□□□□□ -0.44
PDX1-201ENST00000381033 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
PDX1-201ENST00000381033 IGLV4-3A0A075B6K6 122 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.32□□□□□ -0.44
PDX1-201ENST00000381033 IGKV2-29A2NJV5 120 aaPredicted RBP12.32□□□□□ -0.44
PDX1-201ENST00000381033 J3QQQ9 107 aa12.32□□□□□ -0.44
PDX1-201ENST00000381033 PFN2P35080 140 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms